Clone IP11976 Report

Search the DGRC for IP11976

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:119
Well:76
Vector:pOT2
Associated Gene/TranscriptCG14160-RA
Protein status:IP11976.pep: gold
Preliminary Size:1446
Sequenced Size:2131

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14160 2005-01-01 Successful iPCR screen
CG14160 2008-04-29 Release 5.5 accounting
CG14160 2008-08-15 Release 5.9 accounting
CG14160 2008-12-18 5.12 accounting

Clone Sequence Records

IP11976.complete Sequence

2131 bp (2131 high quality bases) assembled on 2005-04-11

GenBank Submission: BT022620

> IP11976.complete
TTAACTTGATTCGTCGCGTTCGCGAGTTGGCTGTCCGACAAGTGTGAGTT
TTGCTTTTTAGCCAAATAGCACTGTGACCACAAAGTGCAAAAATAATGAC
ATACTCAAGAAGACAAACAAGCCAGCAGCGGTTCCAATGAAAAAGTCTCG
AGTAAACAATCAACAAATCAACTGGACAAATAATTAAAAAACGGAAACGT
CGCCAAAAATTGTTAAGTCCCTAGGCTTTTATTGCGTTACGCGTTGTTGT
TGTGATTAAAGTAAAATGCCAATGCTGCCTACAATTGAGGAGGAGGCCAA
GTTGTCCTGGATCCGGCTAATGTGGAAATACCGCCTTCAGTTCCAGTCCA
TGGCCTCGGCGTCGATTGTTTTCGTGGGCTGTGGAATGCGTTTGGCCTGG
TCAATTTTCGATACTCCTGCTGGCAAATTCTTAAACAACCATAATACCCA
CAATCTGATGATGAGCTGGTTTATTGGAGCTGCCGTAGGCGCCCTATTGG
CAGCCCTATTTGTTCAGCGTGTCACCAAAAATGTGGCATATACCTCCAGT
GGCTTCCTGATGATTATAGCTGGCATTCTGAATGTAGTTCTTCCCCAGCA
TTTTCTGGCCGCCTGCTACAGTAGCGTCAGTGTTGGTGCAGCCTATGGGC
TAACCCAGATTCAGGCACTGGTCACTGGATCCGAGGTGGCACACAAATCG
ATTCGAGGAATGCTCCTCAGCTGTGAGAAGATATTCCTGTGGCTGGGGGT
ATGCATGCAGGTGTTCTACACTCGCGTGTGGCACAATTTGAGGCCACTGG
ATACGCAAGGATACGAGATGCACATTGATCAGTTGCATGGAATGGTGTTG
GCCGGCCTGGGGCTGGGAGCTGTTATCCTGGCACTAGCTCATCGCCTGGA
GTCACCATTACTTCTGCTGCATCAGGAACGAGATATGGCTGTGGGTGAGA
CCCTGAAAGCTCTACACGGACAATCCACCACCGAGTTGGTAAGATTACGG
GAAGACTGCAGGCAACTGCACAGCGCTCGAGATTGGGAGCGTTTTGTTGA
GGAGCCGGAAGAATCGGTGGCCGATTGGAGAGTCTGGGCCCGACGTATCC
TGCCCTTTTTCAAGGTCCTGCTACTCAGATGCTTTGCTACCCTCGCCGTG
TCCTTGAGCTATAATCGAGCATTTGTGGTCGTCAGTTGGCATGGCCTCGA
ATGCGATATGAACTGCATGTACTGGCTGGCATTCGCTGGCCTTATAGGCA
GTGTCCTGGGAGCCTTCGTAGTGGATTGGCAGGGACGCAGAAAAGTGTGT
TCCTTATCACTTTTCCTGGCAGGCGTTGTCATCGTGATGGTGGGTGGAGT
GTTCGATCACTTAGAATCTGTTAAGAGATCCTTCTATGACATTAATTTAC
TGGTCATTGCCCTTCTAATGCTGCTATTCGAAGTGATAGTAGCTGGGGGC
GTGGCTGTGCCCGCCCTAGTCTACACAGCCGAGGCCTTTAGCATAGCCCA
CAAGGCAAGATGCTTAGCTGGCATCCTAATCGTAGAGCAATTGCTCCAGT
TGGGTCTGCTTTTGGCCACCTTTGAGCACTACATCACTGTTTCTGTGTTC
TTTTTTACGATCGGTGTTTTTAGTTTTATTGTCGGCTTGACCGTATTTAT
GTTTATGCCAGAAACCAGGCAACTGACACTCTACGAGTGCCTGTTGAAGT
TCAAGAAAGTTCCTTAAAGCGCCGCCGTATCTCTAAGTGCTAAGTATCTC
TTATCTGTACCTATCTGTTATCTATTTTTAAATATTATATATTCTATTCA
TTCGAGTGATTGCTCGTGTGCATATCATTATCTTTCATATACTTTCCCTT
GACGTTCTGGTAACCTCATAGAATAAGTGAACATTTCAACAAACTGTGTT
TGTATCTAAATATTATATTGTAGTATCAAAAAATTTGGCATTTATACTAA
GCAAAAATGAAGTTAATATCCGATAATTGTGAGTAGTCTTAGTCTTATTA
AATCCTATAAATAATATTTATTTGAGGCAAAAGATACTTTGCAGCTAACG
AATTTATGTACATTTCTATAAGGTTTTCCGGCATTTAAAATAAACTTACC
ATGTCTGGAAAGAAAAAAAAAAAAAAAAAAA

IP11976.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:38:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG14160-RA 2246 CG14160-RA 131..2246 1..2116 10580 100 Plus
CG14160-RB 1726 CG14160-RB 1..1614 1..1614 8070 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:06:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 10078406..10079976 2112..542 7705 99.4 Minus
chr3L 24539361 chr3L 10080698..10081056 359..1 1780 99.7 Minus
chr3L 24539361 chr3L 10080454..10080636 541..359 915 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:12:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10086743..10088317 2116..542 7875 100 Minus
3L 28110227 3L 10089042..10089400 359..1 1795 100 Minus
3L 28110227 3L 10088798..10088980 541..359 915 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:28:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 10079843..10081417 2116..542 7875 100 Minus
3L 28103327 3L 10082142..10082500 359..1 1795 100 Minus
3L 28103327 3L 10081898..10082080 541..359 915 100 Minus
Blast to na_te.dros performed 2019-03-17 00:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dhet\Uhu 1658 Dhet\Uhu DHUHUH3 1658bp AKA(S51651) Derived from X63028 (Rel. 36, Last updated, Version 7). 1389..1570 1768..1947 132 59.7 Plus
Dvir\Penelope 4158 Dvir\Penelope DV49102 4158bp Derived from U49102 (Rel. 69, Last updated, Version 4). 2423..2545 1856..1735 116 58.1 Minus

IP11976.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:07:53 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 10078406..10079976 542..2112 98 <- Minus
chr3L 10080454..10080635 360..541 100 <- Minus
chr3L 10080698..10081056 1..359 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:51:04 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
CG14160-RA 1..1452 266..1717 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:04:03 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
CG14160-RA 1..1452 266..1717 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:57:58 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
CG14160-RA 1..1452 266..1717 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:49:13 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
CG14160-RA 1..1452 266..1717 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:12:09 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
CG14160-RA 1..1452 266..1717 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:50:29 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
CG14160-RA 1..2112 1..2112 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:04:03 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
CG14160-RA 1..2112 1..2112 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:57:58 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
CG14160-RA 1..2112 1..2112 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:49:13 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
CG14160-RA 1..2112 1..2112 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:12:09 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
CG14160-RA 1..2112 1..2112 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:07:53 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10086747..10088317 542..2112 100 <- Minus
3L 10088798..10088979 360..541 100 <- Minus
3L 10089042..10089400 1..359 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:07:53 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10086747..10088317 542..2112 100 <- Minus
3L 10088798..10088979 360..541 100 <- Minus
3L 10089042..10089400 1..359 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:07:53 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10086747..10088317 542..2112 100 <- Minus
3L 10088798..10088979 360..541 100 <- Minus
3L 10089042..10089400 1..359 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:57:58 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10079847..10081417 542..2112 100 <- Minus
arm_3L 10081898..10082079 360..541 100 <- Minus
arm_3L 10082142..10082500 1..359 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:23:49 Download gff for IP11976.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10079847..10081417 542..2112 100 <- Minus
3L 10081898..10082079 360..541 100 <- Minus
3L 10082142..10082500 1..359 100   Minus

IP11976.pep Sequence

Translation from 265 to 1716

> IP11976.pep
MPMLPTIEEEAKLSWIRLMWKYRLQFQSMASASIVFVGCGMRLAWSIFDT
PAGKFLNNHNTHNLMMSWFIGAAVGALLAALFVQRVTKNVAYTSSGFLMI
IAGILNVVLPQHFLAACYSSVSVGAAYGLTQIQALVTGSEVAHKSIRGML
LSCEKIFLWLGVCMQVFYTRVWHNLRPLDTQGYEMHIDQLHGMVLAGLGL
GAVILALAHRLESPLLLLHQERDMAVGETLKALHGQSTTELVRLREDCRQ
LHSARDWERFVEEPEESVADWRVWARRILPFFKVLLLRCFATLAVSLSYN
RAFVVVSWHGLECDMNCMYWLAFAGLIGSVLGAFVVDWQGRRKVCSLSLF
LAGVVIVMVGGVFDHLESVKRSFYDINLLVIALLMLLFEVIVAGGVAVPA
LVYTAEAFSIAHKARCLAGILIVEQLLQLGLLLATFEHYITVSVFFFTIG
VFSFIVGLTVFMFMPETRQLTLYECLLKFKKVP*

IP11976.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:27:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23847-PA 486 GF23847-PA 1..486 1..483 2158 86.8 Plus
Dana\GF18491-PA 500 GF18491-PA 53..494 20..482 280 25.5 Plus
Dana\GF23843-PA 473 GF23843-PA 21..467 14..481 276 26.9 Plus
Dana\GF23844-PA 519 GF23844-PA 74..513 21..482 261 25.9 Plus
Dana\GF23845-PA 553 GF23845-PA 106..546 15..480 245 25 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:27:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13990-PA 483 GG13990-PA 1..483 1..483 2199 94.6 Plus
Dere\GG16997-PA 504 GG16997-PA 58..498 20..482 309 26.1 Plus
Dere\GG13988-PA 571 GG13988-PA 114..565 11..481 273 25 Plus
Dere\GG13984-PA 473 GG13984-PA 9..467 2..481 261 26.2 Plus
Dere\GG16995-PA 490 GG16995-PA 45..483 23..481 221 22.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:27:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16565-PA 479 GH16565-PA 1..479 1..483 1931 75.9 Plus
Dgri\GH16560-PA 479 GH16560-PA 21..473 8..481 273 24.6 Plus
Dgri\GH19545-PA 498 GH19545-PA 87..492 60..482 267 24.9 Plus
Dgri\GH19546-PA 492 GH19546-PA 48..486 20..482 266 25.9 Plus
Dgri\GH19544-PA 444 GH19544-PA 30..438 55..482 262 22.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG14160-PA 483 CG14160-PA 1..483 1..483 2487 100 Plus
CG17930-PA 502 CG17930-PA 56..496 20..482 348 27.8 Plus
CG42826-PA 473 CG42826-PA 19..467 12..481 325 26.7 Plus
CG6901-PA 485 CG6901-PA 42..478 23..481 278 24.3 Plus
CG32054-PA 563 CG32054-PA 109..557 14..481 276 24.6 Plus
CG32053-PA 496 CG32053-PA 55..490 25..481 258 26 Plus
CG17929-PB 491 CG17929-PB 79..485 56..482 242 24.1 Plus
CG42825-PA 518 CG6640-PB 73..512 21..481 229 22.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:27:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13855-PA 482 GI13855-PA 1..482 1..483 1785 75.5 Plus
Dmoj\GI13854-PA 489 GI13854-PA 31..487 2..481 289 26.6 Plus
Dmoj\GI13851-PA 512 GI13851-PA 54..506 8..481 288 25.5 Plus
Dmoj\GI22943-PA 488 GI22943-PA 31..468 23..482 267 23.9 Plus
Dmoj\GI22944-PA 492 GI22944-PA 83..483 60..479 251 24.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:27:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11828-PA 481 GL11828-PA 1..481 1..483 2023 82.4 Plus
Dper\GL21599-PA 497 GL21599-PA 84..491 57..482 239 24.9 Plus
Dper\GL11817-PA 490 GL11817-PA 42..484 21..481 233 25.7 Plus
Dper\GL11795-PA 472 GL11795-PA 20..466 14..481 223 24.3 Plus
Dper\GL21598-PA 493 GL21598-PA 68..487 40..482 207 24.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:27:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12795-PA 481 GA12795-PA 1..481 1..483 1980 82.4 Plus
Dpse\GA14732-PA 497 GA14732-PA 84..491 57..482 257 25.6 Plus
Dpse\GA16641-PA 490 GA16641-PA 42..484 21..481 233 25.5 Plus
Dpse\GA23810-PA 472 GA23810-PA 20..466 14..481 221 24.1 Plus
Dpse\GA26344-PA 499 GA26344-PA 74..493 40..482 206 24.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:27:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24824-PA 475 GM24824-PA 1..475 1..483 2242 93.8 Plus
Dsec\GM15149-PA 502 GM15149-PA 56..496 20..482 311 27.2 Plus
Dsec\GM15147-PA 490 GM15147-PA 45..483 23..481 275 24.7 Plus
Dsec\GM24822-PA 553 GM24822-PA 99..547 14..481 241 24.5 Plus
Dsec\GM24821-PA 916 GM24821-PA 471..910 21..481 237 24.2 Plus
Dsec\GM24821-PA 916 GM24821-PA 9..263 2..256 223 28.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12876-PA 483 GD12876-PA 1..483 1..483 2513 98.3 Plus
Dsim\GD19091-PA 500 GD19091-PA 54..494 20..482 310 27.2 Plus
Dsim\GD19089-PA 491 GD19089-PA 46..484 23..481 270 24.9 Plus
Dsim\GD12875-PA 496 GD12875-PA 51..490 21..481 223 27 Plus
Dsim\GD19090-PA 491 GD19090-PA 31..485 5..482 218 22.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:27:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11718-PA 482 GJ11718-PA 1..482 1..483 1844 76.7 Plus
Dvir\GJ11715-PA 485 GJ11715-PA 33..479 14..481 295 27.1 Plus
Dvir\GJ11717-PA 544 GJ11717-PA 118..542 35..481 257 27.9 Plus
Dvir\GJ11716-PA 562 GJ11716-PA 96..554 1..480 255 24 Plus
Dvir\GJ23723-PA 473 GJ23723-PA 30..466 23..481 252 22.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:27:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24105-PA 482 GK24105-PA 1..482 1..483 1958 78.9 Plus
Dwil\GK21730-PA 532 GK21730-PA 87..526 23..482 299 24.6 Plus
Dwil\GK24094-PA 484 GK24094-PA 25..478 9..481 282 25.7 Plus
Dwil\GK13773-PA 495 GK13773-PA 94..488 61..481 248 25.8 Plus
Dwil\GK24100-PA 477 GK24100-PA 15..461 21..480 232 24.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:27:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20286-PA 483 GE20286-PA 1..483 1..483 2216 95.4 Plus
Dyak\GE24390-PA 501 GE24390-PA 55..495 20..482 316 28.3 Plus
Dyak\GE20284-PA 573 GE20284-PA 119..567 14..481 241 25.4 Plus
Dyak\GE24389-PA 491 GE24389-PA 31..484 5..481 237 24.4 Plus
Dyak\GE24387-PA 490 GE24387-PA 45..483 23..481 212 22.8 Plus

IP11976.hyp Sequence

Translation from 265 to 1716

> IP11976.hyp
MPMLPTIEEEAKLSWIRLMWKYRLQFQSMASASIVFVGCGMRLAWSIFDT
PAGKFLNNHNTHNLMMSWFIGAAVGALLAALFVQRVTKNVAYTSSGFLMI
IAGILNVVLPQHFLAACYSSVSVGAAYGLTQIQALVTGSEVAHKSIRGML
LSCEKIFLWLGVCMQVFYTRVWHNLRPLDTQGYEMHIDQLHGMVLAGLGL
GAVILALAHRLESPLLLLHQERDMAVGETLKALHGQSTTELVRLREDCRQ
LHSARDWERFVEEPEESVADWRVWARRILPFFKVLLLRCFATLAVSLSYN
RAFVVVSWHGLECDMNCMYWLAFAGLIGSVLGAFVVDWQGRRKVCSLSLF
LAGVVIVMVGGVFDHLESVKRSFYDINLLVIALLMLLFEVIVAGGVAVPA
LVYTAEAFSIAHKARCLAGILIVEQLLQLGLLLATFEHYITVSVFFFTIG
VFSFIVGLTVFMFMPETRQLTLYECLLKFKKVP*

IP11976.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:44:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG14160-PA 483 CG14160-PA 1..483 1..483 2487 100 Plus
CG17930-PA 502 CG17930-PA 56..496 20..482 348 27.8 Plus
CG42826-PA 473 CG42826-PA 19..467 12..481 325 26.7 Plus
CG6901-PA 485 CG6901-PA 42..478 23..481 278 24.3 Plus
CG32054-PA 563 CG32054-PA 109..557 14..481 276 24.6 Plus