Clone IP12023 Report

Search the DGRC for IP12023

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:120
Well:23
Vector:pOT2
Associated Gene/TranscriptCG15773-RB
Protein status:IP12023.pep: gold
Preliminary Size:1437
Sequenced Size:1107

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15773 2005-01-01 Successful iPCR screen
CG15773 2008-04-29 Release 5.5 accounting

Clone Sequence Records

IP12023.complete Sequence

1107 bp (1107 high quality bases) assembled on 2005-03-28

GenBank Submission: BT022644

> IP12023.complete
TGCGATTGAATGATGGCCAGAAAGCGAGCACTGGATTCCCAACTGCCGCT
CCTTGCGCTGGGTGGCCTAATCATTATGGGATTGGCCATAGTCGATTCCC
TGGAGTGTTATGCCTGCGACTCCGCCGAAGATTCGGAGTGTGCCACCCGA
CCGGGTCAGCAGCTGGAAGTGGAGGAGTGTCAGCAGACGGGCGACGAGTG
TGTCACCTCCATATCGGCGGGATTAACGCGACGCGGCTGCCTGGCGCGGC
TGTATCCTAATGGCTATTGTGCCGCTCCATGCGACCGGTGCAATACGAGC
CTGTGCAATCGGCACGTTTATCCTGCGGATCGATTGCGGTGCTATCAGTG
CAGCGGATCGGATTGCATCGATGTGGCCAGTCGGCCGCAATACCTGCTGC
CGTGTCCGGTTTACCAGGAGGATGACAGGTGCTACACGAACGTAGTCCAC
TTATCCAACACCCTGCGCGGCTGTGAGCACACCAATTTGCCGACAACCTG
TCCGCACGTCTGCCTTAAGTGCAATTATAATGGTTGCAATGCGGAGAAGA
CCGTCACGGAATTGCGCTGCCTTCAGTGCACCCATAATCGATTGGCCCCC
AATCCGGACTGCCTGCGGGACCAGGATCCACCGGCGGCGGTGGCGGAGGA
CCAGCCCAAGTGCTCGTTGAGCAACTCAACTGTGACGCACTGCGTCAACA
AGGTGATGTACGGGCACAGGGAGAACTGCTTTAGCTACCGCAACACCCAG
ACGGAGGTCCTTCAGAGGGGCTGCTCCACCGCCATGGGATTCTATCCCAC
CGGCGAGCTAACCGAGTGCCACGGCGAATTCTGCAATGCCGATTGCCAGG
ACATTGTCTGCGCCGCGTGCAACTCCACCGCGAATCCTGGCTGCCGTGCT
GGCCGCAATTTACCAACGGAAAAGTGCGCAGCAGGCACCACGGCCTGCTA
TTCCTGCGAGCAAGGTTAGGGTGAGTGGGGGAATCTCGACCAGGAACGGC
CCCTTAAGTACCCACTCAAACTGTCAGTTATTCATTTGGAAATAAAATTT
GTTAAGCAATGCATCTCTTCCGGGAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA

IP12023.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:50:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG15773-RA 1437 CG15773-RA 1..955 10..964 4775 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:19:58
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 5625175..5626248 1..1074 5370 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:12:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:19:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5732751..5733826 1..1076 5380 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:10:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 5740849..5741924 1..1076 5380 100 Plus
Blast to na_te.dros performed on 2019-03-15 15:19:57 has no hits.

IP12023.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:21:07 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 5625175..5626248 1..1074 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:51:12 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
CG15773-RA 1..955 10..964 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:46:08 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
CG15773-RA 1..955 10..964 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:24:08 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
CG15773-RB 1..960 10..969 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:27:08 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
CG15773-RA 1..955 10..964 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:02:18 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
CG15773-RB 1..960 10..969 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:55:06 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
CG15773-RA 1..955 10..964 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:46:08 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
CG15773-RA 1..955 10..964 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:24:08 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
CG15773-RB 4..1077 1..1074 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:27:08 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
CG15773-RA 1..955 10..964 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:02:18 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
CG15773-RB 12..1085 1..1074 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:21:07 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
X 5732751..5733824 1..1074 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:21:07 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
X 5732751..5733824 1..1074 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:21:07 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
X 5732751..5733824 1..1074 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:24:08 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5626784..5627857 1..1074 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:00:10 Download gff for IP12023.complete
Subject Subject Range Query Range Percent Splice Strand
X 5740849..5741922 1..1074 100   Plus

IP12023.pep Sequence

Translation from 9 to 968

> IP12023.pep
MMARKRALDSQLPLLALGGLIIMGLAIVDSLECYACDSAEDSECATRPGQ
QLEVEECQQTGDECVTSISAGLTRRGCLARLYPNGYCAAPCDRCNTSLCN
RHVYPADRLRCYQCSGSDCIDVASRPQYLLPCPVYQEDDRCYTNVVHLSN
TLRGCEHTNLPTTCPHVCLKCNYNGCNAEKTVTELRCLQCTHNRLAPNPD
CLRDQDPPAAVAEDQPKCSLSNSTVTHCVNKVMYGHRENCFSYRNTQTEV
LQRGCSTAMGFYPTGELTECHGEFCNADCQDIVCAACNSTANPGCRAGRN
LPTEKCAAGTTACYSCEQG*

IP12023.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:38:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20801-PA 472 GF20801-PA 24..318 24..318 1287 81.4 Plus
Dana\GF14642-PA 549 GF14642-PA 2..305 12..317 235 33.2 Plus
Dana\GF11615-PA 2988 GF11615-PA 1964..2122 26..177 172 33.1 Plus
Dana\GF11615-PA 2988 GF11615-PA 2388..2522 31..158 171 39.1 Plus
Dana\GF11615-PA 2988 GF11615-PA 2806..2956 32..177 160 31.6 Plus
Dana\GF11615-PA 2988 GF11615-PA 1544..1766 33..256 150 30.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:38:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18779-PA 464 GG18779-PA 1..316 2..318 1529 91.5 Plus
Dere\GG21666-PA 300 GG21666-PA 29..261 30..274 204 29.6 Plus
Dere\GG20742-PA 2978 GG20742-PA 1509..1805 6..295 170 29.2 Plus
Dere\GG20742-PA 2978 GG20742-PA 2379..2513 31..158 169 36.8 Plus
Dere\GG20742-PA 2978 GG20742-PA 1955..2113 26..177 166 31.2 Plus
Dere\GG20742-PA 2978 GG20742-PA 2797..2946 32..177 160 32.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:38:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24088-PA 464 GH24088-PA 14..310 18..318 1153 72.8 Plus
Dgri\GH11597-PA 523 GH11597-PA 19..306 25..318 269 32.5 Plus
Dgri\GH11596-PA 421 GH11596-PA 83..332 30..298 182 29.6 Plus
Dgri\GH20775-PA 2920 GH20775-PA 2741..2893 33..180 165 32.7 Plus
Dgri\GH20775-PA 2920 GH20775-PA 1905..2057 33..178 154 32.5 Plus
Dgri\GH20775-PA 2920 GH20775-PA 1473..1633 27..177 153 35.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:25:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG15773-PB 319 CG15773-PB 1..319 1..319 1789 100 Plus
CG15773-PA 478 CG15773-PA 1..318 1..318 1783 100 Plus
CG15170-PB 560 CG15170-PB 32..309 33..317 312 33.3 Plus
CG15170-PA 561 CG15170-PA 33..310 33..317 312 33.3 Plus
CG13492-PD 2979 CG13492-PD 1534..1806 29..295 239 30.2 Plus
CG13492-PD 2979 CG13492-PD 2798..2947 32..177 223 34 Plus
CG13492-PD 2979 CG13492-PD 271..539 26..317 215 25 Plus
CG13492-PD 2979 CG13492-PD 697..950 32..303 215 27.1 Plus
CG10650-PB 425 CG10650-PB 92..354 30..315 211 27.4 Plus
CG10650-PA 425 CG10650-PA 92..354 30..315 211 27.4 Plus
CG13492-PD 2979 CG13492-PD 1956..2229 26..295 209 23.4 Plus
CG13492-PD 2979 CG13492-PD 1372..1638 31..297 204 27 Plus
CG13492-PD 2979 CG13492-PD 1115..1396 28..306 202 24.7 Plus
CG13492-PD 2979 CG13492-PD 2380..2535 31..178 191 34 Plus
CG13492-PD 2979 CG13492-PD 2636..2892 31..295 189 25.8 Plus
CG15347-PA 214 CG15347-PA 14..178 25..177 163 29.2 Plus
CG13492-PD 2979 CG13492-PD 1202..1479 31..308 162 25.1 Plus
CG15347-PB 229 CG15347-PB 37..193 33..177 160 29.4 Plus
CG13492-PD 2979 CG13492-PD 534..793 32..295 156 26.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:38:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15900-PA 462 GI15900-PA 1..305 8..318 1160 71.4 Plus
Dmoj\GI17166-PA 561 GI17166-PA 32..313 28..317 235 30.3 Plus
Dmoj\GI20859-PA 2960 GI20859-PA 1907..2096 12..178 185 33 Plus
Dmoj\GI20859-PA 2960 GI20859-PA 2781..2933 33..180 169 31.2 Plus
Dmoj\GI17165-PA 402 GI17165-PA 59..310 30..296 156 28.1 Plus
Dmoj\GI20859-PA 2960 GI20859-PA 678..808 32..156 151 34.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:38:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14461-PA 141 GL14461-PA 2..78 63..139 353 83.1 Plus
Dper\GL14462-PA 211 GL14462-PA 1..75 233..307 296 69.3 Plus
Dper\GL19620-PA 548 GL19620-PA 4..294 20..317 255 32.3 Plus
Dper\GL17513-PA 2988 GL17513-PA 1973..2124 33..177 178 34.6 Plus
Dper\GL17513-PA 2988 GL17513-PA 2390..2525 31..158 174 36.2 Plus
Dper\GL17513-PA 2988 GL17513-PA 2808..2958 32..177 168 32.3 Plus
Dper\GL17513-PA 2988 GL17513-PA 704..956 33..303 161 29 Plus
Dper\GL17513-PA 2988 GL17513-PA 1539..1818 27..297 155 31.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:38:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13948-PA 549 GA13948-PA 92..404 4..318 1262 75.9 Plus
Dpse\GA13547-PA 548 GA13547-PA 4..294 20..317 251 31.9 Plus
Dpse\GA12325-PA 2988 GA12325-PA 2808..2958 32..177 182 32.5 Plus
Dpse\GA12325-PA 2988 GA12325-PA 1973..2124 33..177 179 34.6 Plus
Dpse\GA12325-PA 2988 GA12325-PA 2390..2525 31..158 174 36.2 Plus
Dpse\GA12325-PA 2988 GA12325-PA 704..956 33..303 160 29 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:38:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12431-PA 453 GM12431-PA 1..132 2..133 585 96.2 Plus
Dsec\GM12431-PA 453 GM12431-PA 202..305 215..318 530 96.2 Plus
Dsec\GM17044-PA 558 GM17044-PA 29..309 30..317 228 32.1 Plus
Dsec\GM15685-PA 2979 GM15685-PA 1510..1806 6..295 163 28.5 Plus
Dsec\GM15685-PA 2979 GM15685-PA 2798..2947 32..177 163 33.1 Plus
Dsec\GM15685-PA 2979 GM15685-PA 2380..2511 31..155 158 37 Plus
Dsec\GM17043-PA 425 GM17043-PA 149..354 89..315 150 28.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:38:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16746-PA 465 GD16746-PA 1..317 2..318 1533 96.5 Plus
Dsim\GD21792-PA 559 GD21792-PA 30..310 30..317 223 31.8 Plus
Dsim\GD25164-PA 2028 GD25164-PA 1847..1996 32..177 162 33.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:38:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16648-PA 456 GJ16648-PA 27..308 32..318 1162 77 Plus
Dvir\GJ17671-PA 553 GJ17671-PA 23..305 27..317 224 30 Plus
Dvir\GJ20594-PA 2976 GJ20594-PA 2798..2949 33..180 163 32.5 Plus
Dvir\GJ20594-PA 2976 GJ20594-PA 1959..2118 26..178 158 32.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:38:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24922-PA 471 GK24922-PA 16..315 15..318 1213 75.1 Plus
Dwil\GK23785-PA 532 GK23785-PA 13..310 15..317 267 33 Plus
Dwil\GK15649-PA 2984 GK15649-PA 2387..2543 30..178 172 36.2 Plus
Dwil\GK15649-PA 2984 GK15649-PA 2802..2930 32..156 168 34.9 Plus
Dwil\GK15649-PA 2984 GK15649-PA 1971..2123 33..178 158 33.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:38:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16424-PA 464 GE16424-PA 1..314 1..318 1534 91.8 Plus
Dyak\GE13674-PA 2979 GE13674-PA 1510..1806 6..295 172 29.2 Plus
Dyak\GE13674-PA 2979 GE13674-PA 1956..2114 26..177 150 30 Plus

IP12023.hyp Sequence

Translation from 9 to 968

> IP12023.hyp
MMARKRALDSQLPLLALGGLIIMGLAIVDSLECYACDSAEDSECATRPGQ
QLEVEECQQTGDECVTSISAGLTRRGCLARLYPNGYCAAPCDRCNTSLCN
RHVYPADRLRCYQCSGSDCIDVASRPQYLLPCPVYQEDDRCYTNVVHLSN
TLRGCEHTNLPTTCPHVCLKCNYNGCNAEKTVTELRCLQCTHNRLAPNPD
CLRDQDPPAAVAEDQPKCSLSNSTVTHCVNKVMYGHRENCFSYRNTQTEV
LQRGCSTAMGFYPTGELTECHGEFCNADCQDIVCAACNSTANPGCRAGRN
LPTEKCAAGTTACYSCEQG*

IP12023.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG15773-PB 319 CG15773-PB 1..319 1..319 1789 100 Plus
CG15773-PA 478 CG15773-PA 1..318 1..318 1783 100 Plus
CG15170-PB 560 CG15170-PB 32..309 33..317 312 33.3 Plus
CG15170-PA 561 CG15170-PA 33..310 33..317 312 33.3 Plus
CG13492-PD 2979 CG13492-PD 1534..1806 29..295 239 30.2 Plus