Clone IP12064 Report

Search the DGRC for IP12064

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:120
Well:64
Vector:pOT2
Associated Gene/TranscriptCG30120-RB
Protein status:IP12064.pep: gold
Preliminary Size:1494
Sequenced Size:2495

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30120 2005-01-01 Successful iPCR screen
CG30120 2008-04-29 Release 5.5 accounting
CG30120 2008-08-15 Release 5.9 accounting
CG5189 2008-08-15 Release 5.9 accounting
CG5189 2008-12-18 5.12 accounting
CG30120 2008-12-18 5.12 accounting

Clone Sequence Records

IP12064.complete Sequence

2495 bp (2495 high quality bases) assembled on 2006-03-22

GenBank Submission: BT024985

> IP12064.complete
TTTTTTATATTTTCCCTCTTTAAAAATACACAAAATGTTGAAACCCAAAG
CTTTGACGCAGGTTCTCAGCCAGGCGAACACCGGCGGAGTGGAGAACACC
CTCCTGCTCAGCCAGGAGGGAGCTCTATTGGCCTACTCCGGTTATGGCGA
TAAGGATGCCAGGATAACGGCGGCCATAGCCAGCAACATATGGGCGGCCT
ACGAGAAGCATGGACGCAACGCCTTTCGCGAAGGTCGCCTCACTTTCGTG
CTCATCGATTGTGAAAACGGTCATGTGGCCATCACACAGGTTGCCAGTGT
CCTTTTGTGCCTGTACGCCAAGCAAACGGTGGGATTGGGTCTTCTGAAGC
AAAAGGCCATGTCACTGGCCTCCTATTTGGAGCGACCGCTTAAGCAGATC
TCGGCCTCATAAGGATAAAACAATGATGTACCAAGTTCCGAAATGAATAA
GTTAATAAGTGTATGCATCAAAAGTGAATCAAATGAATATGAATAGTCTG
CGGAAAAGTTTAAACGATAATATATTAGTACTTGAAATTATGAATCTTTA
AGGATTTTGTTAGTATTTAAGGAAAAACTTGTCTGCTGGTTTCCAAAAGT
AACCCAAAGATATTTCGTATTCTGAATTATTTGGATAGAGGGTCAGGTTT
ATTATTCTGCAAGATTTGTTCAAGAAAACACACAATCATTAGGGAATATT
GTATAAGAAAATTTTGGACTTAATTACTAAGTGTGGACTTATTCGATGGC
GTAGAGCTTCAGGGTGCGGTCCATGCTGGTGGATGCCAGATACTGGGCGT
GCTTGCCGAATCTCACGCCCGTTGCCAGGGCCGTGTGGTCGTTGAATACC
TTCAGTTCCTGCCACTGCTTGCACAGGTAAACCCTGTAAATAAAACGAAG
CAACCGTCAGAATTTGTATTTGTACCGTGGCAACCAAATAAACAAGTTAA
CTAAGGGAATCTTCTTTGGCGAATTTAACTTAACAATGCGAAAGTTTAAA
AGAAAAGTTTACCGCGAATATGAAAATTTCGTGCGACCCAAGACCCATGT
GGAACCGGAGCCTCCAAAGCCCATAAACTTATCGATTGAGGACTTCAATG
CGCGCGGAGAGATCGCCAATCCCCGTGCTCCTTGTGTGGTCACCACCATC
GATCCCGATTATATTAAGGACGCCAGTGCGCAACGTTTGGCCAGAAAATT
TCGCATGAAAACGGACATCCTACTCTTGAGGGAGATTACCCGCAATCGCT
TTATGTACTATGCTACGCAAGAACTTTTTTTGGACCGAAAACGCGAGAAG
GAATACCAAGACAATGTATACGAAAAGGCCGAGGAGTTTCACAAGTTTGC
AGAGGAGTCGCTCAAGAAAATGGAAGCGGAGGAGTTTAAGAAAATGTTAG
AGGCCCAAGAAAAGCTGAAGACACTGAAGGAAAGCAAACTGAGCGAAGAG
CTGAACGAGGTGAAGCTGGAGCATCAGCGAGTGCTGATGGAAGTGCAGGA
GGTCTACGGTCGCTTTCAGTATTTACTCAAACTGATCAGCTACTTTGATG
ACACAGTTGAGGAGGAGCAAACCGAGGGAGACGATGCCAGCAATAGGCTT
AGCATGCCGCAGGAAATCGTAGCCATGGAGATCACCGAACGACATCCAGC
GGGTCTCGAGCAAGTGCGTCAAGTCCAAGACTACATGGAGAAGATAGTGC
GTCCGTATTTGGCAAAGCGGAATCATCTCAATGCAGAGATTTGGATACGT
GGCTATGAGAGAAATCGCTTAAAGGTGTCCAACTACAACAGGCGCTTTTC
TCAGTTGGCAATCTTGAACCACATCGTAGCCATCCTCCATGACAAGGCCC
AGAAGACGTACGAGCGTCAGGTGAAAGCCAATGTGTTCCTCAAGGATCCC
GAGTTCCTGCAGCGACGGGTGGCAGGTCTTCAGGAGCGTGCCAAGGGTCT
ATTAAATGACTTCGAGCAGAGATACTGCAAGGACAAGCTGAATATCAAGC
TAAATGCTATTGTACCAATTATTCTCAAGCAAATCCAAAACAAAGTTAAG
CCGGAGCAAAAGCGAGAGGTTACGCAGCCGCCATCCAAGCCAGCAGCCCA
GAAGTCGTCCAAGCAATGGCGAACACTGGAAGACATGCAGCCTCCACCAC
CGCCACCCAAGTCTACATACGCGGACGAACAGGACACGACTCTTGCCAAG
GTGGAGAAAATCCAGGGCTACGTTTTGGAGCTCTTGGCTAAACTGGACCA
CATCGAACCGAGCAAGCTGCGAAGTGTCGAGCAGCAGGTTCGACGTCGCA
TGGCAGCGGAGAAGGAAATGTCTCGCCGTGCGTTAGTCAAGCAGAACCGG
CTACACAATTGGATGGCGCATTTCAAGAAGCATCATGATCAGCAGGTTGA
GCAACGATGGAAAAATAAAGTCTAAGCTAGACAACAACACCATACTTAAA
ACATTAAATGAATACAATTTAAAACTTAAAAAAAAAAAAAAAAAA

IP12064.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:35:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG30120-RB 2511 CG30120-RB 35..2511 1..2477 12370 99.9 Plus
CG5189-RB 2511 CG5189-RB 35..2511 1..2477 12370 99.9 Plus
CG5189-RA 662 CG5189-RA 35..662 1..628 3140 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:02:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 14335180..14335950 1213..1983 3720 98.8 Plus
chr2R 21145070 chr2R 14334093..14334832 286..1025 3700 100 Plus
chr2R 21145070 chr2R 14336006..14336499 1984..2477 2395 99 Plus
chr2R 21145070 chr2R 14333843..14334031 103..291 945 100 Plus
chr2R 21145070 chr2R 14335019..14335130 1102..1213 545 99.1 Plus
chr2R 21145070 chr2R 14333683..14333784 1..102 510 100 Plus
chr2R 21145070 chr2R 14334887..14334963 1026..1102 370 98.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:12:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18448101..18448871 1213..1983 3855 100 Plus
2R 25286936 2R 18447014..18447753 286..1025 3700 100 Plus
2R 25286936 2R 18448927..18449421 1984..2478 2460 99.8 Plus
2R 25286936 2R 18446764..18446952 103..291 945 100 Plus
2R 25286936 2R 18447940..18448051 1102..1213 560 100 Plus
2R 25286936 2R 18446604..18446705 1..102 510 100 Plus
2R 25286936 2R 18447808..18447884 1026..1102 385 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:25:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 18449300..18450070 1213..1983 3855 100 Plus
2R 25260384 2R 18448213..18448952 286..1025 3700 100 Plus
2R 25260384 2R 18450126..18450620 1984..2478 2460 99.7 Plus
2R 25260384 2R 18447963..18448151 103..291 945 100 Plus
2R 25260384 2R 18449139..18449250 1102..1213 560 100 Plus
2R 25260384 2R 18447803..18447904 1..102 510 100 Plus
2R 25260384 2R 18449007..18449083 1026..1102 385 100 Plus
Blast to na_te.dros performed on 2019-03-15 18:02:04 has no hits.

IP12064.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:02:46 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 14333683..14333784 1..102 100 -> Plus
chr2R 14333843..14334029 103..289 100 -> Plus
chr2R 14334097..14334832 290..1025 100 -> Plus
chr2R 14334887..14334963 1026..1102 98 -> Plus
chr2R 14335020..14335129 1103..1212 99 -> Plus
chr2R 14335180..14335950 1213..1983 98 -> Plus
chr2R 14336006..14336499 1984..2477 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:51:19 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
CG30120-RB 1..1440 986..2425 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:59:51 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
CG30120-RB 1..1440 986..2425 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:53:17 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
CG30120-RB 1..1440 986..2425 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:40:23 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
CG30120-RB 1..1440 986..2425 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:53:13 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
CG30120-RB 1..1440 986..2425 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:42:04 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
CG30120-RB 35..2511 1..2477 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:59:51 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
CG5189-RB 35..2511 1..2477 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:53:17 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
CG30120-RB 57..2533 1..2477 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:40:23 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
CG30120-RB 35..2511 1..2477 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:53:13 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
CG5189-RB 57..2533 1..2477 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:46 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18446604..18446705 1..102 100 -> Plus
2R 18446764..18446950 103..289 100 -> Plus
2R 18447018..18447753 290..1025 100 -> Plus
2R 18447808..18447884 1026..1102 100 -> Plus
2R 18447941..18448050 1103..1212 100 -> Plus
2R 18448101..18448871 1213..1983 100 -> Plus
2R 18448927..18449420 1984..2477 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:46 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18446604..18446705 1..102 100 -> Plus
2R 18446764..18446950 103..289 100 -> Plus
2R 18447018..18447753 290..1025 100 -> Plus
2R 18447808..18447884 1026..1102 100 -> Plus
2R 18447941..18448050 1103..1212 100 -> Plus
2R 18448101..18448871 1213..1983 100 -> Plus
2R 18448927..18449420 1984..2477 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:02:46 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18446604..18446705 1..102 100 -> Plus
2R 18446764..18446950 103..289 100 -> Plus
2R 18447018..18447753 290..1025 100 -> Plus
2R 18447808..18447884 1026..1102 100 -> Plus
2R 18447941..18448050 1103..1212 100 -> Plus
2R 18448101..18448871 1213..1983 100 -> Plus
2R 18448927..18449420 1984..2477 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:53:17 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14334109..14334210 1..102 100 -> Plus
arm_2R 14334269..14334455 103..289 100 -> Plus
arm_2R 14334523..14335258 290..1025 100 -> Plus
arm_2R 14335313..14335389 1026..1102 100 -> Plus
arm_2R 14335446..14335555 1103..1212 100 -> Plus
arm_2R 14335606..14336376 1213..1983 100 -> Plus
arm_2R 14336432..14336925 1984..2477 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:19:20 Download gff for IP12064.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18448217..18448952 290..1025 100 -> Plus
2R 18449007..18449083 1026..1102 100 -> Plus
2R 18449140..18449249 1103..1212 100 -> Plus
2R 18449300..18450070 1213..1983 100 -> Plus
2R 18450126..18450619 1984..2477 99   Plus
2R 18447963..18448149 103..289 100 -> Plus
2R 18447803..18447904 1..102 100 -> Plus

IP12064.hyp Sequence

Translation from 985 to 2424

> IP12064.hyp
MRKFKRKVYREYENFVRPKTHVEPEPPKPINLSIEDFNARGEIANPRAPC
VVTTIDPDYIKDASAQRLARKFRMKTDILLLREITRNRFMYYATQELFLD
RKREKEYQDNVYEKAEEFHKFAEESLKKMEAEEFKKMLEAQEKLKTLKES
KLSEELNEVKLEHQRVLMEVQEVYGRFQYLLKLISYFDDTVEEEQTEGDD
ASNRLSMPQEIVAMEITERHPAGLEQVRQVQDYMEKIVRPYLAKRNHLNA
EIWIRGYERNRLKVSNYNRRFSQLAILNHIVAILHDKAQKTYERQVKANV
FLKDPEFLQRRVAGLQERAKGLLNDFEQRYCKDKLNIKLNAIVPIILKQI
QNKVKPEQKREVTQPPSKPAAQKSSKQWRTLEDMQPPPPPPKSTYADEQD
TTLAKVEKIQGYVLELLAKLDHIEPSKLRSVEQQVRRRMAAEKEMSRRAL
VKQNRLHNWMAHFKKHHDQQVEQRWKNKV*

IP12064.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:45:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG30120-PB 479 CG30120-PB 1..479 1..479 2469 100 Plus

IP12064.pep Sequence

Translation from 985 to 2424

> IP12064.pep
MRKFKRKVYREYENFVRPKTHVEPEPPKPINLSIEDFNARGEIANPRAPC
VVTTIDPDYIKDASAQRLARKFRMKTDILLLREITRNRFMYYATQELFLD
RKREKEYQDNVYEKAEEFHKFAEESLKKMEAEEFKKMLEAQEKLKTLKES
KLSEELNEVKLEHQRVLMEVQEVYGRFQYLLKLISYFDDTVEEEQTEGDD
ASNRLSMPQEIVAMEITERHPAGLEQVRQVQDYMEKIVRPYLAKRNHLNA
EIWIRGYERNRLKVSNYNRRFSQLAILNHIVAILHDKAQKTYERQVKANV
FLKDPEFLQRRVAGLQERAKGLLNDFEQRYCKDKLNIKLNAIVPIILKQI
QNKVKPEQKREVTQPPSKPAAQKSSKQWRTLEDMQPPPPPPKSTYADEQD
TTLAKVEKIQGYVLELLAKLDHIEPSKLRSVEQQVRRRMAAEKEMSRRAL
VKQNRLHNWMAHFKKHHDQQVEQRWKNKV*

IP12064.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:51:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11966-PA 479 GF11966-PA 1..479 4..479 2054 83.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:51:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21898-PA 471 GG21898-PA 1..471 1..479 2323 93.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:51:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19710-PA 440 GH19710-PA 3..440 40..479 1595 69.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG30120-PB 479 CG30120-PB 1..479 1..479 2469 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20131-PA 476 GI20131-PA 1..476 1..479 1779 70.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17780-PA 480 GL17780-PA 1..480 1..479 2057 80.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15664-PA 480 GA15664-PA 1..480 1..479 2042 79.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:51:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21889-PA 497 GM21889-PA 1..497 1..479 2428 92.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11386-PA 479 GD11386-PA 1..479 1..479 2474 97.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19901-PA 475 GJ19901-PA 1..475 1..479 1739 69.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:51:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23001-PA 485 GK23001-PA 1..478 1..478 1980 77.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:51:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11973-PA 479 GE11973-PA 1..479 1..479 2367 94.4 Plus