Clone IP12126 Report

Search the DGRC for IP12126

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:121
Well:26
Vector:pOT2
Associated Gene/TranscriptCG16734-RD
Protein status:IP12126.pep: gold
Preliminary Size:1272
Sequenced Size:1414

Clone Sequence Records

IP12126.complete Sequence

1414 bp assembled on 2009-05-01

GenBank Submission: BT082118.1

> IP12126.complete
TTTTGGATGCTACATAATTTAAAAGAGATTTTCGAAAACAAAATGACTTG
CGATGATACCACCGAAGCGCTCGCCACTCACATGTGTGAGCTGTTGGAGT
TTTATATGCTGCCGGAGCTGAAGGAGGACCTGGACAACATTCAGCTGGAG
ACGTCGCAATTCGACAGCTACCATTCCCTACTTATCCAGGATCTGCCAAA
GCTCTACGATTTGGTGCAGGAATTCCTCCTGAAAAGTGGTGATGCAGGAC
ACGAAGAGCTAAGATTCAAGCTCCTCCTGCTGATTTGCGAATTGACAGCT
TCGCCTACAATTTACCAACTAAAGGACGACTCTGGTAATCTCCTGAAGTA
TGCTAATGATTTGGCTAGTAAGCTGTCTTCCCATTGGTGGGAGTCGACGG
ATGATCAATTCCTGAAATACTACGAGAAGAAACTGCACAGGGATTGCTGG
AAGAGACAACTAGGAGCTGTGCATGGTTTCGGCAGATATCTAGAGCTTCG
TTACGGAAAGAAATCCGCAATGTCCACCCAAATGTTGGCTTTTGCACTAT
CCGTGGGTCTTAATGTGCGCGAATGCTATGATACTATCTACAAGCAACTT
GGGGTCAAGATCTTCTCAGTGATGTTAAAATTTAGCGACTCCAAGGACAT
TCAGGAACTGAACGTGCACAGTGTGATCTATGACCATGCCCTCAAGGATG
TCTACAACATGGACTCAATTGAAGCCATCGAATCTGTTTGGAACTGCCTG
TATTTCTGTCTTGATCACTTTGTAGATCTAGATGCTTTCACGTGGAACCA
ATGCGACGACATGCTGGAACGCCTCATTCAGAACGTGACAATGGCCTCCA
GCCCAAAAGTTTTAATCTGCCTGCTGCAGTATATCATCCGATTAGGATAC
TACTTCACCATCAATCGCAGCGATGTGAAAACTGCTTTGGCCATGGATAT
ATGCGAACCAGATAAATTGGTAGCGTGTCGGGACGTATGCCTTGCTCTAA
ATGTTAGCACCAGCTATCGTTGGGCCAAGGCCATCCTACAAATGCTTGTC
CTGGAGTCGAGCAAGCTGCTCCAAGGTGTCGAGGTATGCACTGCTTTACT
GGATCAACTGCTAAGATGCTATCTGGTTTGCATCATGCCTATTCCTCTGC
AAGCTTTGCATCCGCACCTGCCGGAGTTTTACGGGAAGTTTGTGGCTGTG
TTAATGGAATGTTTGGTGGCCCACGAGAAGGCACCTCCAGTTCTAAAACT
CGTTTCGCGGTTCATCGAAGTCTTTAGCTTCCAACTGGAAAACGGGATAA
CCGAAACAATGCCCGCCCAACTATCAGAATTCAAGGAGGCTCTGTCAATT
GTGCACCACAAGATTTGTGAATAAATATGGGGGTCTTTATGTTATATAAA
AAAAAAAAAAAAAA

IP12126.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:25:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG16734-RD 1480 CG16734-RD 88..1480 1..1393 6965 100 Plus
CG16734-RB 1493 CG16734-RB 737..1493 637..1393 3785 100 Plus
CG16734-RB 1493 CG16734-RB 45..681 1..637 3185 100 Plus
CG16736-RA 908 CG16736-RA 861..908 1398..1351 240 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:52:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5081848..5082304 792..1248 2255 99.6 Plus
chr3R 27901430 chr3R 5080829..5081086 1..258 1290 100 Plus
chr3R 27901430 chr3R 5081137..5081375 257..495 1195 100 Plus
chr3R 27901430 chr3R 5081637..5081792 637..792 780 100 Plus
chr3R 27901430 chr3R 5082364..5082512 1249..1397 745 100 Plus
chr3R 27901430 chr3R 5081438..5081581 494..637 720 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:13:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:53
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9256071..9256527 792..1248 2285 100 Plus
3R 32079331 3R 9255052..9255309 1..258 1290 100 Plus
3R 32079331 3R 9255360..9255598 257..495 1195 100 Plus
3R 32079331 3R 9255860..9256015 637..792 780 100 Plus
3R 32079331 3R 9256587..9256736 1249..1398 750 100 Plus
3R 32079331 3R 9255661..9255804 494..637 720 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:19:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 8996902..8997358 792..1248 2285 100 Plus
3R 31820162 3R 8995883..8996140 1..258 1290 100 Plus
3R 31820162 3R 8996191..8996429 257..495 1195 100 Plus
3R 31820162 3R 8996691..8996846 637..792 780 100 Plus
3R 31820162 3R 8997418..8997567 1249..1398 750 100 Plus
3R 31820162 3R 8996492..8996635 494..637 720 100 Plus
Blast to na_te.dros performed on 2019-03-15 14:52:53 has no hits.

IP12126.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:53:59 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5081637..5081792 637..792 100 -> Plus
chr3R 5080829..5081086 1..258 100 -> Plus
chr3R 5081139..5081375 259..495 100 -> Plus
chr3R 5081440..5081580 496..636 100 -> Plus
chr3R 5081849..5082304 793..1248 99 -> Plus
chr3R 5082364..5082512 1249..1397 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:51:56 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
CG16734-RA 1..1272 106..1374 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:50:26 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
CG16734-RD 1..1332 43..1374 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:47:32 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
CG16734-RD 1..1332 43..1374 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:13:12 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
CG16734-RD 1..1332 43..1374 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-01 14:55:50 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
CG16734-RA 1..1272 106..1374 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:50:26 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
CG16734-RD 1..1393 1..1393 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:47:32 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
CG16734-RD 1..1393 1..1393 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:13:12 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
CG16734-RD 1..1393 1..1393 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:53:59 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9255052..9255309 1..258 100 -> Plus
3R 9255362..9255598 259..495 100 -> Plus
3R 9255663..9255803 496..636 100 -> Plus
3R 9255860..9256015 637..792 100 -> Plus
3R 9256072..9256527 793..1248 100 -> Plus
3R 9256587..9256735 1249..1397 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:53:59 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9255052..9255309 1..258 100 -> Plus
3R 9255362..9255598 259..495 100 -> Plus
3R 9255663..9255803 496..636 100 -> Plus
3R 9255860..9256015 637..792 100 -> Plus
3R 9256072..9256527 793..1248 100 -> Plus
3R 9256587..9256735 1249..1397 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:53:59 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9255052..9255309 1..258 100 -> Plus
3R 9255362..9255598 259..495 100 -> Plus
3R 9255663..9255803 496..636 100 -> Plus
3R 9255860..9256015 637..792 100 -> Plus
3R 9256072..9256527 793..1248 100 -> Plus
3R 9256587..9256735 1249..1397 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:47:32 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5080774..5081031 1..258 100 -> Plus
arm_3R 5081084..5081320 259..495 100 -> Plus
arm_3R 5081385..5081525 496..636 100 -> Plus
arm_3R 5081582..5081737 637..792 100 -> Plus
arm_3R 5081794..5082249 793..1248 100 -> Plus
arm_3R 5082309..5082457 1249..1397 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:41:22 Download gff for IP12126.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8995883..8996140 1..258 100 -> Plus
3R 8996193..8996429 259..495 100 -> Plus
3R 8996494..8996634 496..636 100 -> Plus
3R 8996691..8996846 637..792 100 -> Plus
3R 8996903..8997358 793..1248 100 -> Plus
3R 8997418..8997566 1249..1397 100   Plus

IP12126.hyp Sequence

Translation from 0 to 1373

> IP12126.hyp
FWMLHNLKEIFENKMTCDDTTEALATHMCELLEFYMLPELKEDLDNIQLE
TSQFDSYHSLLIQDLPKLYDLVQEFLLKSGDAGHEELRFKLLLLICELTA
SPTIYQLKDDSGNLLKYANDLASKLSSHWWESTDDQFLKYYEKKLHRDCW
KRQLGAVHGFGRYLELRYGKKSAMSTQMLAFALSVGLNVRECYDTIYKQL
GVKIFSVMLKFSDSKDIQELNVHSVIYDHALKDVYNMDSIEAIESVWNCL
YFCLDHFVDLDAFTWNQCDDMLERLIQNVTMASSPKVLICLLQYIIRLGY
YFTINRSDVKTALAMDICEPDKLVACRDVCLALNVSTSYRWAKAILQMLV
LESSKLLQGVEVCTALLDQLLRCYLVCIMPIPLQALHPHLPEFYGKFVAV
LMECLVAHEKAPPVLKLVSRFIEVFSFQLENGITETMPAQLSEFKEALSI
VHHKICE*

IP12126.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:45:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG16734-PD 443 CG16734-PD 1..443 15..457 2321 100 Plus

IP12126.pep Sequence

Translation from 0 to 1373

> IP12126.pep
FWMLHNLKEIFENKMTCDDTTEALATHMCELLEFYMLPELKEDLDNIQLE
TSQFDSYHSLLIQDLPKLYDLVQEFLLKSGDAGHEELRFKLLLLICELTA
SPTIYQLKDDSGNLLKYANDLASKLSSHWWESTDDQFLKYYEKKLHRDCW
KRQLGAVHGFGRYLELRYGKKSAMSTQMLAFALSVGLNVRECYDTIYKQL
GVKIFSVMLKFSDSKDIQELNVHSVIYDHALKDVYNMDSIEAIESVWNCL
YFCLDHFVDLDAFTWNQCDDMLERLIQNVTMASSPKVLICLLQYIIRLGY
YFTINRSDVKTALAMDICEPDKLVACRDVCLALNVSTSYRWAKAILQMLV
LESSKLLQGVEVCTALLDQLLRCYLVCIMPIPLQALHPHLPEFYGKFVAV
LMECLVAHEKAPPVLKLVSRFIEVFSFQLENGITETMPAQLSEFKEALSI
VHHKICE*

IP12126.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:02:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16585-PA 440 GF16585-PA 1..440 15..457 1710 72.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:02:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15752-PA 444 GG15752-PA 1..444 15..457 2043 86.3 Plus
Dere\GG15641-PA 373 GG15641-PA 1..182 36..264 803 70.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:02:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18104-PA 444 GH18104-PA 21..442 36..455 1178 52.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG16734-PD 443 CG16734-PD 1..443 15..457 2321 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:02:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24604-PA 424 GI24604-PA 1..415 36..448 1130 51.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:02:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13942-PA 442 GL13942-PA 1..440 15..455 1657 68.3 Plus
Dper\GL13943-PA 392 GL13943-PA 1..390 15..455 1346 59.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:02:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14115-PA 443 GA14115-PA 1..441 15..455 1645 68.1 Plus
Dpse\GA26900-PA 327 GA26900-PA 2..325 134..455 1215 68.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:02:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23789-PA 443 GM23789-PA 1..443 15..457 2209 93.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:02:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18600-PA 443 GD18600-PA 1..443 15..457 2213 93.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:02:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22667-PA 425 GJ22667-PA 1..406 36..439 1217 55.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:02:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22431-PA 424 GK22431-PA 1..415 36..448 1341 59 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:02:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25936-PA 422 GE25936-PA 1..422 36..457 2001 89.1 Plus