Clone IP12205 Report

Search the DGRC for IP12205

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:122
Well:5
Vector:pOT2
Associated Gene/TranscriptCG14926-RA
Protein status:IP12205.pep: gold
Preliminary Size:1320
Sequenced Size:758

Clone Sequence Records

IP12205.complete Sequence

758 bp assembled on 2009-06-05

GenBank Submission: BT088770.1

> IP12205.complete
AACAGATCGGCCAACAAAATTTTTTCAAAAACCATTTGAAATTTTTTTGA
AATTTTTAAATTTTTTAACGATGGAAAACGGTCCGGAATTCAATTGGGAG
TACAGCCATGGTGGTCAGGGAAATCCCAACTACTCACAGATGGGAAGGGG
TAGTACTCCTCCTGGAGGCGGTGGTCGTCAGTGGCTGCACTCAAGTCAAG
CGAACACCCAAAACTATTTGCATGGATCCAGTGGAATGGGATCGCACCAG
AATAACGCATCTCCAGGTGATCCATTCGCCTCCTACAACCAAAATATGAT
GAACATGTACACGAATTTTAAGCCCAGTTACGGTCATTCTCAAGTTGGCC
CGGCTTCGGTACAGGGCATGGGCTCAGAGCCTGGTCTTGAAATGGGTAAC
AGAATGGGCCATTCCATGCCCGAGTCTATGGGATTCGATGGAGGCATGGG
TTCCGGCATGGGCATGAGCAATGGCCTTGGCGCTGGAATGCGAGTTGGTT
CCATGCGTGGTGGTCAAAGGTTAGCTGGAGGCTACTCTTCGAATGGTCTC
AATGATCCGAACCCTTCGCAATCCCACCGTGGTAGTTGGTTCTAGAAGAG
CCCATTAGTTCCTAACTAACTTTACGAATCTCATTTGGCACTTGAAAATT
AAATATAATAGGCTTCCCATGAAATGTATATTCACAAAGCAAGTAACTCG
AAATTTCCCGTTTAAGAATAATAAATTGATCACATAATAAAAAAAAAAAA
AAAAAAAA

IP12205.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:31:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14926-RA 875 CG14926-RA 108..848 1..741 3705 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:58:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 11341549..11341760 348..137 1045 99.5 Minus
chr2L 23010047 chr2L 11341295..11341494 547..348 940 98 Minus
chr2L 23010047 chr2L 11341050..11341244 738..545 880 97.9 Minus
chr2L 23010047 chr2L 11341812..11341949 139..1 615 97.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:13:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:58:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11342837..11343048 348..137 1060 100 Minus
2L 23513712 2L 11342581..11342780 547..348 1000 100 Minus
2L 23513712 2L 11342333..11342529 741..545 985 100 Minus
2L 23513712 2L 11343100..11343238 139..1 695 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:47:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11342837..11343048 348..137 1060 100 Minus
2L 23513712 2L 11342581..11342780 547..348 1000 100 Minus
2L 23513712 2L 11342333..11342529 741..545 985 100 Minus
2L 23513712 2L 11343100..11343238 139..1 695 100 Minus
Blast to na_te.dros performed on 2019-03-16 21:58:28 has no hits.

IP12205.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:59:43 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 11341050..11341243 546..738 97 <- Minus
chr2L 11341297..11341493 349..545 97 <- Minus
chr2L 11341549..11341757 140..348 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:10:01 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
CG14926-RA 1..525 71..595 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:46:56 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
CG14926-RA 1..525 71..595 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:05:54 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
CG14926-RA 1..525 71..595 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:36:30 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
CG14926-RA 1..525 71..595 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-05 16:46:42 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
CG14926-RA 26..763 1..738 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:46:56 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
CG14926-RA 26..763 1..738 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:05:54 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
CG14926-RA 26..763 1..738 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:36:30 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
CG14926-RA 26..763 1..738 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:59:43 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11342837..11343045 140..348 100 <- Minus
2L 11343100..11343238 1..139 100   Minus
2L 11342336..11342528 546..738 100 <- Minus
2L 11342583..11342779 349..545 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:59:43 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11342837..11343045 140..348 100 <- Minus
2L 11343100..11343238 1..139 100   Minus
2L 11342336..11342528 546..738 100 <- Minus
2L 11342583..11342779 349..545 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:59:43 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11342837..11343045 140..348 100 <- Minus
2L 11343100..11343238 1..139 100   Minus
2L 11342336..11342528 546..738 100 <- Minus
2L 11342583..11342779 349..545 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:05:54 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11342336..11342528 546..738 100 <- Minus
arm_2L 11342583..11342779 349..545 100 <- Minus
arm_2L 11342837..11343045 140..348 100 <- Minus
arm_2L 11343100..11343238 1..139 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:22:20 Download gff for IP12205.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11342837..11343045 140..348 100 <- Minus
2L 11343100..11343238 1..139 100   Minus
2L 11342336..11342528 546..738 100 <- Minus
2L 11342583..11342779 349..545 100 <- Minus

IP12205.hyp Sequence

Translation from 0 to 594

> IP12205.hyp
TDRPTKFFQKPFEIFLKFLNFLTMENGPEFNWEYSHGGQGNPNYSQMGRG
STPPGGGGRQWLHSSQANTQNYLHGSSGMGSHQNNASPGDPFASYNQNMM
NMYTNFKPSYGHSQVGPASVQGMGSEPGLEMGNRMGHSMPESMGFDGGMG
SGMGMSNGLGAGMRVGSMRGGQRLAGGYSSNGLNDPNPSQSHRGSWF*

IP12205.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:46:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14926-PC 174 CG14926-PC 1..174 24..197 970 100 Plus
CG14926-PB 174 CG14926-PB 1..174 24..197 970 100 Plus
CG14926-PA 174 CG14926-PA 1..174 24..197 970 100 Plus

IP12205.pep Sequence

Translation from 1 to 594

> IP12205.pep
TDRPTKFFQKPFEIFLKFLNFLTMENGPEFNWEYSHGGQGNPNYSQMGRG
STPPGGGGRQWLHSSQANTQNYLHGSSGMGSHQNNASPGDPFASYNQNMM
NMYTNFKPSYGHSQVGPASVQGMGSEPGLEMGNRMGHSMPESMGFDGGMG
SGMGMSNGLGAGMRVGSMRGGQRLAGGYSSNGLNDPNPSQSHRGSWF*

IP12205.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:43:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15123-PA 159 GF15123-PA 4..159 28..197 297 47.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:43:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10312-PA 177 GG10312-PA 1..177 24..197 639 81.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14926-PC 174 CG14926-PC 1..174 24..197 970 100 Plus
CG14926-PB 174 CG14926-PB 1..174 24..197 970 100 Plus
CG14926-PA 174 CG14926-PA 1..174 24..197 970 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:43:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11083-PA 186 GM11083-PA 1..186 24..197 765 89.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:43:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22177-PA 186 GD22177-PA 1..186 24..197 752 89.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:43:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12905-PA 180 GE12905-PA 1..180 24..197 707 83.3 Plus