Clone IP12209 Report

Search the DGRC for IP12209

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:122
Well:9
Vector:pOT2
Associated Gene/TranscriptCG15337-RA
Protein status:IP12209.pep: gold
Preliminary Size:1372
Sequenced Size:1447

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15337 2005-01-01 Successful iPCR screen
CG15337 2008-04-29 Release 5.5 accounting
CG15337 2008-08-15 Release 5.9 accounting
CG15337 2008-12-18 5.12 accounting

Clone Sequence Records

IP12209.complete Sequence

1447 bp assembled on 2006-11-21

GenBank Submission: BT030117

> IP12209.complete
CGATATTTTAGATTTATTTGGCATTGTGTGTTGCACGTGAAAAAAAATCG
CTGCCGGACATGGACACAACAATGCCGATGGGCATGGTGCCCAACAGTCT
CAATCCGATCCTCAATCCTCGACCCCTGCCGATACCCGTTACCAAGCCCA
GAACCAAACTCCAGCCGGATGAGCCACACGATGGCGTTTTAGCGTTTAAC
AAGGGAAAAGTACCTCCGCCGGTATCCTCACGTCCTATTCCGCTCCAGCG
TGCAATGTCTGAGGTTCGGGACGCGCTGCGAGCTCAGCCTCAGGCCAGTG
ACATTCGCCTGTTGATCTTCACGGCGGCGGCCAGCAGTGTGGAGCACGAG
AGAACTCTCATTCCGGTGCCGCCACAATTTCAAGCGGCACCAGGCTCCGG
CTGCCAAGTGGATCGATTGCGTCACGCCGTCGCCGATAATTGGCCCTCCT
GTCGCATCATGTTGGACTGCCCCAGTACTGACGAGCAGTATGCCGCTTTG
ATGCCGGACGATGTGGACGCCCTGCATTTGCTGCACTGGATCCTGGTGGC
CACGCCCTCGTCGCCCACTCTGCGCCGCATGTCGGGATTGCATTTGCGGC
GACTTTGCCGCTTTCTGGGCCTGGCACGACCCACCTTGGAGCCCGGCCAT
CTGCTGAGCATCAGTTATGAGCGGAATGTTCAGCGGCTGGGCGATTCGAG
TCCAAGGCCAAGATCCAGTTACGCCTATCTGGGCTTGCCCTTTCAGTACC
TATATCGTTTCCTGGCCACTGGACGTCTGGAGCAACCGCCAGGTGTTGCC
ATTCGTTTGTATGCCCAACCGGAAACAGCCTTGGTTCACTGCGACGAGCT
GAGCTCGCTGCCGCAGCAGCAGCATGTCCAGTCGGAGGAGCAATCGTCCA
GCCAATCCATTGCAGAGAGGGAGCAGTCTGGAAATTCAAGCTCGCTGTGC
TGGCGGAACTCCACGCTCACTGCACCGCAAAGGGCACTGGTCATATGCGA
ACTACCCTCGGAGTTGGACGAATCCATTGCCCATTCGCCGGAGAAGCATT
TTCTCGAGTACTTTGTGCAGGAATCGCTGTCACTGCGACCCTGCTATCTG
CTCCTCTTCGACGAGGCGGTGGCCTCCAACATAATGTTCGTCTGGCCGGG
CAAATGTATTGAGCTGGAGCATCCGGGTCCTTCGATGGTCCAGAGATCGC
GTATCAGGATCATGAATATCGTCCGGAATCTGAGCAACCGGTTGGGAGCA
GTTAGGCGGGCTTTAGCCGCCATTTAGATTTTTATTTTATATATGGCCAA
GGACACTGATCTCGGCCAGGTGCCGTCCGTCGTTCAAAGTCCTGGACATG
CCAACTCCGGTGAACTGGAGCTACTTAATTTTTTTGGAATTTCTCAAACA
ATTGTTAATAAATATTTGGCAACTTATACTAAAAAAAAAAAAAAAAA

IP12209.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:11:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15337-RA 1506 CG15337-RA 76..1506 1..1431 7155 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:01:14
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 8052168..8053400 200..1430 5980 99.2 Plus
chrX 22417052 chrX 8051900..8052098 1..199 995 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:13:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8160322..8161554 200..1432 6165 100 Plus
X 23542271 X 8160054..8160252 1..199 995 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:05:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 8168420..8169652 200..1432 6165 100 Plus
X 23527363 X 8168152..8168350 1..199 995 100 Plus
Blast to na_te.dros performed on 2019-03-16 06:01:12 has no hits.

IP12209.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:02:25 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 8051900..8052098 1..199 100 -> Plus
chrX 8052168..8053400 200..1430 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:51:27 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 1..1218 60..1277 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:18:35 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 1..1218 60..1277 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:14:27 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 1..1218 60..1277 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:32:17 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 1..1218 60..1277 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:12:58 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 1..1218 60..1277 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:46:49 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 1..1371 60..1430 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:18:34 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 1..1371 60..1430 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:14:27 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 1..1430 1..1430 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:32:18 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 1..1371 60..1430 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:12:58 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
CG15337-RA 1..1430 1..1430 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:02:25 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
X 8160054..8160252 1..199 100 -> Plus
X 8160322..8161552 200..1430 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:02:25 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
X 8160054..8160252 1..199 100 -> Plus
X 8160322..8161552 200..1430 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:02:25 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
X 8160054..8160252 1..199 100 -> Plus
X 8160322..8161552 200..1430 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:14:27 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8054087..8054285 1..199 100 -> Plus
arm_X 8054355..8055585 200..1430 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:48:12 Download gff for IP12209.complete
Subject Subject Range Query Range Percent Splice Strand
X 8168152..8168350 1..199 100 -> Plus
X 8168420..8169650 200..1430 100   Plus

IP12209.hyp Sequence

Translation from 59 to 1276

> IP12209.hyp
MDTTMPMGMVPNSLNPILNPRPLPIPVTKPRTKLQPDEPHDGVLAFNKGK
VPPPVSSRPIPLQRAMSEVRDALRAQPQASDIRLLIFTAAASSVEHERTL
IPVPPQFQAAPGSGCQVDRLRHAVADNWPSCRIMLDCPSTDEQYAALMPD
DVDALHLLHWILVATPSSPTLRRMSGLHLRRLCRFLGLARPTLEPGHLLS
ISYERNVQRLGDSSPRPRSSYAYLGLPFQYLYRFLATGRLEQPPGVAIRL
YAQPETALVHCDELSSLPQQQHVQSEEQSSSQSIAEREQSGNSSSLCWRN
STLTAPQRALVICELPSELDESIAHSPEKHFLEYFVQESLSLRPCYLLLF
DEAVASNIMFVWPGKCIELEHPGPSMVQRSRIRIMNIVRNLSNRLGAVRR
ALAAI*

IP12209.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:46:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG15337-PA 405 CG15337-PA 1..405 1..405 2110 100 Plus

IP12209.pep Sequence

Translation from 59 to 1276

> IP12209.pep
MDTTMPMGMVPNSLNPILNPRPLPIPVTKPRTKLQPDEPHDGVLAFNKGK
VPPPVSSRPIPLQRAMSEVRDALRAQPQASDIRLLIFTAAASSVEHERTL
IPVPPQFQAAPGSGCQVDRLRHAVADNWPSCRIMLDCPSTDEQYAALMPD
DVDALHLLHWILVATPSSPTLRRMSGLHLRRLCRFLGLARPTLEPGHLLS
ISYERNVQRLGDSSPRPRSSYAYLGLPFQYLYRFLATGRLEQPPGVAIRL
YAQPETALVHCDELSSLPQQQHVQSEEQSSSQSIAEREQSGNSSSLCWRN
STLTAPQRALVICELPSELDESIAHSPEKHFLEYFVQESLSLRPCYLLLF
DEAVASNIMFVWPGKCIELEHPGPSMVQRSRIRIMNIVRNLSNRLGAVRR
ALAAI*

IP12209.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 00:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21313-PA 481 GF21313-PA 86..481 52..405 1067 55.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 00:14:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19303-PA 385 GG19303-PA 1..385 1..405 1532 74.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG15337-PA 405 CG15337-PA 1..405 1..405 2110 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 00:14:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14371-PA 380 GI14371-PA 73..319 60..350 277 30.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 00:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20366-PA 382 GL20366-PA 46..335 62..369 614 44.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 00:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13656-PA 387 GA13656-PA 31..340 44..369 629 43.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:14:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11234-PA 403 GM11234-PA 1..403 1..405 1947 94.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:14:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24768-PA 406 GD24768-PA 1..406 1..405 1970 95.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:14:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15769-PA 404 GE15769-PA 1..404 1..405 1666 79.1 Plus