BDGP Sequence Production Resources |
Search the DGRC for IP12210
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 122 |
Well: | 10 |
Vector: | pOT2 |
Associated Gene/Transcript | Cp7Fb-RB |
Protein status: | IP12210.pep: gold |
Preliminary Size: | 1503 |
Sequenced Size: | 1425 |
Gene | Date | Evidence |
---|---|---|
Cp7Fb | 2008-04-29 | Release 5.5 accounting |
Cp7Fb | 2008-04-29 | Picked prior to 5.5 |
Cp7Fb | 2008-08-15 | Release 5.9 accounting |
Cp7Fb | 2008-12-18 | 5.12 accounting |
1425 bp (1425 high quality bases) assembled on 2006-09-20
GenBank Submission: BT029090
> IP12210.complete CCAATGAAAATAGAATGCAAGAATTTTACTTTGCATTTAAATCTATAAAT AAACCATTAAGTGTACTTTAAATGTATTAAATGTATCATTAAGTGTTTTA AATATTCCCACGACATATTATTTGACTTATTTGTTTATGAATTGCATTAT TACAGTTGAGCATATCTAATAGAGATTTTACACTGTTTAATAGTTTGTAA TACAGTGTGTTTATTTTTGAATGAATGCCATGTAATGCGATATGTTGCAC AAGAAAATAATTGATTATATATAAACAAACATTTGTATAAGCTGGCATAA TTCAAAATGTTTTTCACAATACGTTTAAAACTAAAATGTTTACTTTCCGT TCGCATTGGCTAGGTTCCACTGTGGACAATTCTGCGTTTGGCGTTTGGAT CTCAAGCCATCGAGACACTCGACACTGAAGAAAGCGGCGAACGTCGGGAA CATGACTTTTGACGGAAAACATGACCCGCGAACTATTTGAAAAGGTCAGC GAAAACAAAAACAAACAGAGTGGCCAAGCCGGCGTCTCTGGGGAAGAAGA CCTTGCCCAAAGTCAAGACCATTGGGGTCCGCGTGCTGGCCGAGATGATA TAAAGAATGTGACAATACATTCTGCGGCTAGTAGCCAGCAAGGCAGACAA CCGAGAAGATCTAACCGAGATGCGATACTCCATGGCAATGATCCCGATTC TGGGCCTGCTGCTCGTAGCACTGATCCACGCCGCTCCCGTTGAGGTCGTC TACACGGGCGAAAGTTGCGCCTGTCCCACCCAACTGGGTTACCAGCTAAA TGTGCCCAATACCCCAAAGCCAAAGAAGTATGTCGGTGGCGAGTACGGCT ATCGGGTGGAGAAGCCCGTCCAGACGAAAGCCAAGATTACCTACAGCTTT GACTTCACTGTGGAGCAGCCGAGGACACCGGCGCCGCCCAAGAACAATCC CGCCAAGCTGTATGCCAAGGTGGACCGGATCACAGTCAACAAAGCGGATT GCCAGGCCAAGAACAAGTCAACATGCGGCTGCTCGAGTTGCTCCGGCCAA AAACCCAGCTACGGCGAAGACGCGGGCTACGGCTACTGAAGAGAGATCTT ACATATAAACCAACAATATCAAAACCGAAACCCAAACCAAAACTCCAAAC CGAATGCAACCCAACCCAACCCAACCCATCGATCTGCTGAGCTCGGCTTA AAATCCAGCCGAAAGTAGGCCAGTGGAGCACTCCGCTTTCGGGTCTCCAT TCGCTTGTATATATGTACATATATATATATATATATGTATCTACGTGTAC TATAGAAGTTATGAATCCAACCTCCGATTTCTGTTTACGTTTTCCGCTTT TGTCGGCACTTCAAGAAGTTGCCCCAATTAACTGGTTAATAAAGTGTTTG CCTGATTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 8364973..8365969 | 1..997 | 4985 | 100 | Plus |
chrX | 22417052 | chrX | 8367488..8367839 | 1056..1407 | 1760 | 100 | Plus |
chrX | 22417052 | chrX | 8366111..8366177 | 997..1063 | 320 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6855..6955 | 1..101 | 137 | 62.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8364973..8365969 | 1..997 | 100 | -> | Plus |
chrX | 8366112..8366172 | 998..1058 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp7Fb-RA | 1..394 | 670..1063 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp7Fb-RB | 1..420 | 670..1089 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp7Fb-RB | 1..420 | 670..1089 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp7Fb-RA | 1..394 | 670..1063 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp7Fb-RB | 1..420 | 670..1089 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp7Fb-RA | 1..1058 | 1..1058 | 100 | -> | Plus |
Cp7Fb-RA | 2377..2725 | 1059..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp7Fb-RB | 1..1407 | 1..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp7Fb-RB | 1..775 | 633..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp7Fb-RA | 1..394 | 670..1063 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cp7Fb-RB | 1..775 | 633..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8473205..8474201 | 1..997 | 100 | -> | Plus |
X | 8474344..8474404 | 998..1058 | 100 | -> | Plus |
X | 8475723..8476071 | 1059..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8473205..8474201 | 1..997 | 100 | -> | Plus |
X | 8474344..8474404 | 998..1058 | 100 | -> | Plus |
X | 8475723..8476071 | 1059..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8473205..8474201 | 1..997 | 100 | -> | Plus |
X | 8474344..8474404 | 998..1058 | 100 | -> | Plus |
X | 8475723..8476071 | 1059..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8367238..8368234 | 1..997 | 100 | -> | Plus |
arm_X | 8368377..8368437 | 998..1058 | 100 | -> | Plus |
arm_X | 8369756..8370104 | 1059..1407 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8481303..8482299 | 1..997 | 100 | -> | Plus |
X | 8482442..8482502 | 998..1058 | 100 | -> | Plus |
X | 8483821..8484169 | 1059..1407 | 100 | Plus |
Translation from 669 to 1088
> IP12210.hyp MRYSMAMIPILGLLLVALIHAAPVEVVYTGESCACPTQLGYQLNVPNTPK PKKYVGGEYGYRVEKPVQTKAKITYSFDFTVEQPRTPAPPKNNPAKLYAK VDRITVNKADCQAKNKSTCGCSSCSGQKPSYGEDAGYGY*
Translation from 669 to 1088
> IP12210.pep MRYSMAMIPILGLLLVALIHAAPVEVVYTGESCACPTQLGYQLNVPNTPK PKKYVGGEYGYRVEKPVQTKAKITYSFDFTVEQPRTPAPPKNNPAKLYAK VDRITVNKADCQAKNKSTCGCSSCSGQKPSYGEDAGYGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22368-PA | 534 | GF22368-PA | 28..153 | 7..131 | 553 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18253-PA | 500 | GG18253-PA | 1..131 | 1..131 | 663 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12238-PA | 534 | GH12238-PA | 27..136 | 23..131 | 456 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cp7Fb-PB | 139 | CG15350-PB | 1..139 | 1..139 | 749 | 100 | Plus |
Cp7Fb-PA | 500 | CG15350-PA | 1..131 | 1..131 | 697 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15772-PA | 534 | GI15772-PA | 1..134 | 1..131 | 438 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20314-PA | 368 | GL20314-PA | 19..107 | 21..109 | 329 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13662-PA | 432 | GA13662-PA | 18..113 | 20..115 | 367 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21605-PA | 500 | GM21605-PA | 1..131 | 1..131 | 691 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16901-PA | 500 | GD16901-PA | 1..131 | 1..131 | 691 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18628-PA | 547 | GJ18628-PA | 30..139 | 23..131 | 424 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19990-PA | 511 | GK19990-PA | 25..117 | 22..114 | 318 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15784-PA | 499 | GE15784-PA | 1..131 | 1..131 | 655 | 92.4 | Plus |