Clone IP12315 Report

Search the DGRC for IP12315

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:123
Well:15
Vector:pOT2
Associated Gene/TranscriptCG15465-RA
Protein status:IP12315.pep: gold
Preliminary Size:1269
Sequenced Size:1982

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15465 2005-01-01 Successful iPCR screen
CG15465 2008-04-29 Release 5.5 accounting

Clone Sequence Records

IP12315.complete Sequence

1982 bp (1982 high quality bases) assembled on 2005-04-11

GenBank Submission: BT022700

> IP12315.complete
GAAAATGAAGTGCCAAAGTGTTGAAAATAAAGCGAAAGCCAAGAGACGAA
ATTGAAATCGAGTATAAAAGGTTTTTCCGTTCAGTTTTAATCGGTATCGC
GCGTTCACTTCCGTTCCGTTTCGTTACGTTTCGTTTGGCTACGATCTGCG
TTCGCCTTAGCCCAGCCGTTTCCGTTTCCGTTCCGTTCCGTTCCGTTTCG
TTCCGTTTCCGCTCGGCAAACATTTAAATGGCTACCAGCTGCTGCTTATG
ATGGAGACATTCCTCGTCCTGGGCCTGTGTTTCATCCTGTACGAGGCATT
GGATTTCTTTCAGGGCTGCATTCACAGTAATACCCCATCGCCCAGCGATC
AAATCGAAGCCTATCGCCGCGAACTCGACGAACAGCGCCAGCAGCAGCAG
CAGGAACAATTCCTGGCAGGATTGACGCCGTTGCTAGGCGCTCAATTTGC
CGCTGCCGCCGCCGCCGCGGCTGCTGCCGCCGGTTCGCAGTCGACGTTGG
GCAGCACGACCACGCCCACCGCCTCCACGGCCAGCGTGATAAGTGATTCA
TACGATCAGGAATCGCAATCGCAATCGCAATCTCAATCACAGTCCCAGTC
GCAATCCAATCAAAATCAACAGCATTCGCTAAGCACTCCTGGCCTGTTTC
GTCCCGCCGCCTTGGGCTACTACGATCCGGAGGATCCATTGCATGCCACA
AACTCCCTACCGCGCGACTTTTACTATCTACAGCAGCAGCAGCTAAAGAA
CAAGGTCAGCTCAAGATCGCTACTCTCCAAGTTCTCATCGACCAATTCGG
ATAATCGCATACATCCGGAGGCTGGAGCCGGTTCAGGGCATCATCATAGC
GTACTTGGAGCAGCGTCTGTTATAACAAGTCAACCCTTACCATCTGGCGG
TGAGATACCATCCAGTCTCTTCGATCAGCCGGGACAACCGGCTGTGGTTG
TGCCACCACTGCAATTGCAACCCTCATCACCGCTATTTGTGGAGCTTAAG
AGGGCGATTATAAGTCAGAATCAAAGATCACAACCGATAAAGTATCAGGC
AAGAGAATCAATCGAAGAGCCACAGTGCCCTCAGTGCGAGGAAGAGCAGA
TACAGTATTTGGCCGAGACTTTGGACGATCTTGCCGAATCCGAAGATCAG
CGGTATTCGCCAGCCGAAGAGGAGGACGACGACGACGACGAAGAGGAGGA
GGAGGAGGAAGAGGAGCAGAACGAAGAGCAGGAGGATCGGGAGGAGCAGC
ATCCCTACGTGGGAGGAGCTACCAGTGAGCCAGATATTTGTGCCGCCACA
CGACAACAGCTAACCAGGATTCATCACATCGCCATTGACGACATCGCCAC
CGGACAGGAGCATCATCATCATCATCATCACCATCTCAGCATTTCGGGAC
AGGCAACGTCGTTGGGCGCCAATTCTCACGCAGACTTCAGGGAAATCGAG
TGCGAGCGACTGCGACGCAAGTGCGTTAGCGTTAAGCGCATCTATAGCAT
ATCGGAAAAGTTCTAATTCAGATTCAAATCAGATCACTCTACTCAAAACT
CAATTCGATATCTCAGCTCTCTCATACCTGTACAGCCCTTCACCATATTG
CACTTCAATCGATCAATATACCGAAACCAAAATACAAAATCAATCAAAAT
CGAGAATCGAAAATCGCCAAATCAAAAATCGAAGCCAAATCAAATCGAAA
TAAATGCAAAATCAGTTTTCAAATTCCGCTCACCAACAATCGAACCAAAT
GCAACCAAAATCACAAAATTGCCCAAAGCGAAACACCCCACACAAGTTAA
CTTGCAGTTGAGTAAGATGTGCGCTACAGACAGACTAAGAAAAACAATAA
ACACGACAAGAAAAACCAAACAACTCGAGTGCTATTAAACGACAAAACAT
AACAAAACAACAAGAAATTAATAAATTAAAATACCCCCCCAAAAATAAAA
ACAAAGAGAAAAGGAAAAAAAAAAAAAAAAAA

IP12315.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:38:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG15465.a 2228 CG15465.a 265..2228 1..1964 9820 100 Plus
rg.f 11197 rg.f 1..178 1805..1982 845 98.3 Plus
CG15464-RB 530 CG15464-RB 1..106 1877..1982 485 97.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:00:58
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 5067623..5069433 1..1796 8415 98.1 Plus
chrX 22417052 chrX 5079519..5079690 1793..1964 860 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:13:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:00:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 5174993..5176788 1..1796 8980 100 Plus
X 23542271 X 5186888..5187077 1793..1982 905 98.4 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:28:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 5183091..5184886 1..1796 8980 100 Plus
X 23527363 X 5194986..5195175 1793..1982 905 98.4 Plus
Blast to na_te.dros performed 2019-03-16 07:00:57
Subject Length Description Subject Range Query Range Score Percent Strand
TART-C 11124 TART-C TARTC 11124bp 910..1150 1621..1869 138 54 Plus
TART-C 11124 TART-C TARTC 11124bp 1293..1524 1549..1779 131 53.8 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 2049..2280 1549..1779 131 53.8 Plus
TART-A 13424 TART-A 13424bp 2695..2848 1627..1781 124 56.1 Plus

IP12315.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:01:57 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 5067623..5067696 1..74 98 == Plus
chrX 5067758..5068177 136..560 82 == Plus
chrX 5068235..5068788 612..1165 99 == Plus
chrX 5068870..5069433 1247..1796 93 -> Plus
chrX 5079523..5079666 1797..1940 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:51:53 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
CG15465-RA 1..1269 248..1516 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:03:40 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
CG15465-RA 1..1269 248..1516 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:29:15 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
CG15465-RA 1..1269 248..1516 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:48:52 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
CG15465-RA 1..1269 248..1516 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:27:24 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
CG15465-RA 1..1269 248..1516 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:51:52 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
CG15465-RA 265..1780 1..1516 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:03:40 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
CG15465-RA 265..1780 1..1516 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:29:15 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
rg-RJ 2268..4196 1..1940 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:48:53 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
CG15465-RA 265..1780 1..1516 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:27:24 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
rg-RR 286..2214 1..1940 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:01:57 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
X 5174993..5176788 1..1796 100 -> Plus
X 5186892..5187035 1797..1940 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:01:57 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
X 5174993..5176788 1..1796 100 -> Plus
X 5186892..5187035 1797..1940 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:01:57 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
X 5174993..5176788 1..1796 100 -> Plus
X 5186892..5187035 1797..1940 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:29:15 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 5069026..5070821 1..1796 100 -> Plus
arm_X 5080925..5081068 1797..1940 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:23:25 Download gff for IP12315.complete
Subject Subject Range Query Range Percent Splice Strand
X 5183091..5184886 1..1796 100 -> Plus
X 5194990..5195133 1797..1940 100   Plus

IP12315.pep Sequence

Translation from 247 to 1515

> IP12315.pep
MMETFLVLGLCFILYEALDFFQGCIHSNTPSPSDQIEAYRRELDEQRQQQ
QQEQFLAGLTPLLGAQFAAAAAAAAAAAGSQSTLGSTTTPTASTASVISD
SYDQESQSQSQSQSQSQSQSNQNQQHSLSTPGLFRPAALGYYDPEDPLHA
TNSLPRDFYYLQQQQLKNKVSSRSLLSKFSSTNSDNRIHPEAGAGSGHHH
SVLGAASVITSQPLPSGGEIPSSLFDQPGQPAVVVPPLQLQPSSPLFVEL
KRAIISQNQRSQPIKYQARESIEEPQCPQCEEEQIQYLAETLDDLAESED
QRYSPAEEEDDDDDEEEEEEEEEQNEEQEDREEQHPYVGGATSEPDICAA
TRQQLTRIHHIAIDDIATGQEHHHHHHHHLSISGQATSLGANSHADFREI
ECERLRRKCVSVKRIYSISEKF*

IP12315.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:22:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21328-PA 393 GF21328-PA 1..393 1..422 1187 76.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:22:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18743-PA 413 GG18743-PA 1..413 1..422 1651 95.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:22:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24601-PA 420 GH24601-PA 1..256 1..262 740 73.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG15465-PB 422 CG15465-PB 1..422 1..422 2180 100 Plus
CG15465-PA 422 CG15465-PA 1..422 1..422 2180 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:22:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15272-PA 337 GI15272-PA 1..314 2..332 665 63 Plus
Dmoj\GI15272-PA 337 GI15272-PA 307..337 392..422 165 96.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:22:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14277-PA 413 GL14277-PA 1..260 2..264 795 74.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:22:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13750-PA 409 GA13750-PA 1..409 2..422 960 61.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:22:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12387-PA 418 GM12387-PA 1..418 1..422 2169 98.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:22:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16720-PA 123 GD16720-PA 1..102 2..103 359 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:22:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16843-PA 381 GJ16843-PA 9..381 25..422 728 56.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:23:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10289-PA 435 GK10289-PA 1..435 1..422 797 56.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:23:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16385-PA 413 GE16385-PA 1..413 1..422 1690 92.2 Plus

IP12315.hyp Sequence

Translation from 247 to 1515

> IP12315.hyp
MMETFLVLGLCFILYEALDFFQGCIHSNTPSPSDQIEAYRRELDEQRQQQ
QQEQFLAGLTPLLGAQFAAAAAAAAAAAGSQSTLGSTTTPTASTASVISD
SYDQESQSQSQSQSQSQSQSNQNQQHSLSTPGLFRPAALGYYDPEDPLHA
TNSLPRDFYYLQQQQLKNKVSSRSLLSKFSSTNSDNRIHPEAGAGSGHHH
SVLGAASVITSQPLPSGGEIPSSLFDQPGQPAVVVPPLQLQPSSPLFVEL
KRAIISQNQRSQPIKYQARESIEEPQCPQCEEEQIQYLAETLDDLAESED
QRYSPAEEEDDDDDEEEEEEEEEQNEEQEDREEQHPYVGGATSEPDICAA
TRQQLTRIHHIAIDDIATGQEHHHHHHHHLSISGQATSLGANSHADFREI
ECERLRRKCVSVKRIYSISEKF*

IP12315.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:45:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG15465-PB 422 CG15465-PB 1..422 1..422 2180 100 Plus
CG15465-PA 422 CG15465-PA 1..422 1..422 2180 100 Plus