Clone IP12384 Report

Search the DGRC for IP12384

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:123
Well:84
Vector:pOT2
Associated Gene/TranscriptCG31202-RA
Protein status:IP12384.pep: gold
Preliminary Size:1581
Sequenced Size:1706

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31202 2005-01-01 Successful iPCR screen
CG31202 2008-04-29 Release 5.5 accounting
CG31202 2008-08-15 Release 5.9 accounting
CG31202 2008-12-18 5.12 accounting

Clone Sequence Records

IP12384.complete Sequence

1706 bp (1706 high quality bases) assembled on 2005-02-26

GenBank Submission: BT022212

> IP12384.complete
AGAATGTACTTCTTTTTCTTCGTTATTCGACGGGCGCAATATAATTGGTA
TACGGCAAATACCAAATCGAGAATTCGGATCATAGCTACCGGAATTTTCA
CAGTCGGCGTAATAGTGATTACATATATTCAGTGCCGTGCAATGATGAGA
GAATCCTTTCAGAAGAACATACCATCGAATGACAATTCATTGAAGGATAT
GAATCCTGACGATATGCGGGCGAAGATAAAGGAGATGATGATGCACGCCT
GGCGAAACTATGCTCGCGTTGTTTGGGGCACCAACGAGTTTCGTCCGATT
TCCCGTCGTGTCCATTTTGGTGGCGACTTCGCAACCTACAAGCTTGGTGC
CACTATCATCGAGAGCTTGGACACTTTGCATTTGATGGGTCTGAACAAAG
AGTTGAGGCGTTCTCGGGATTGGATAGAGAAATCCTTCCATTTGGACCGG
GTTGATGAAGCGTTGTCCGTTTATGAACTGACATCCAGGCTGCTGTGTCC
CATGCTCACTCTATATTCCCTCACCGGGGATTCCCTCTACATGGACAAGG
CCATCCATATTGCCGATAAGATCCTGCCTGCCTTCGACACGCCAACTGGT
ATACCCAGACGACTAGTGGTCCCAAAAGAAGGCAGCACCCTCACGAAGTA
CCTAAGTGATATCTCTCGCACTTCTGAATTTGGCTCTCTGCACCTGGAGT
TCTACTATCTCAGTGAAGTCTCTGGATATCCGGTGTACAGGGAGCGAGTG
GATGCTATCCGCGAGATATTAGCTAAAACAACCAGGCCCAATGGCCTTTA
TCCCAATGCCTATTGCACAAAATTTGGTAAGTGGGAAAATTACAACTGCT
CCATGCACCGACTTTATGATACCCTGCTAAAGTCATGGATTCAGTCCGGG
AGAACTGATACTCAAAATGCTGATACCTTCAAAGAAGCCATGCTAGCTGT
GGCTCAAAATCTGGTTGTCATCAATCCCGAGGACGTGACCTACGTGTCCA
CGTTCAGGAATGGCACTCTTTTCCATCGTATGAGGCACTCCGATTGCTTT
GCCGGCGGGCTTTTTGTCCTGGGAGCAGCAGAAACCCAAATGAAGCACTG
GGAAAAGTATGCCCATATTGGCATAGGCCTCACAGATACTTGTCACGACA
GCTACTGGAGTTCTCCCACTCGGTTGGGTCCGGATACGTTTGCCTTCACG
GAGGAAAGCCAGCAGGAAATAGAGCCGCTCCAGAGGAACTATTACAATTT
ACGGCCGGAAGTCGCGGAAACTTACTTGGTTCTGTGGCGCATAACCCATC
ATCCACAGTACCGCTTGTGGGGATTGGAGATGGTGCAGGCGATAGAGAAG
TACTGCCGAATGCCCTACGGATATACTGGAGTGATGGACGTTAACAACGT
TACTTCGGAACCGGATGACGTGCAGGGGTCCTTCTTCTTGGGCTCCACTC
TGAAGTATTTGTATCTGCTCTTCTCCGACGACGACGTGGTTTCGCTGGAG
CAGTGGGTCTTCAACAGTGCAGGCCATTTCCTGCCCATTAAGGGCGTGAA
CCCAATGTATCGTCAGCATAACTCATCGAACTAAACATTAGCCAATTACC
AAAATAGTTAGCATCTATTTAAAGTTTAACTTTTAATGCAGACATGTATA
AAAAACTTGTGTGATCTAATACTTTCACAATGAATTAAAAAAAAAAAAAA
AAAAAA

IP12384.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:42:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG31202-RA 1686 CG31202-RA 1..1686 1..1686 8430 100 Plus
CG15522.a 907 CG15522.a 836..907 1692..1621 345 98.6 Minus
CG15522.c 1114 CG15522.c 1043..1114 1692..1621 345 98.6 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:25:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 25751131..25752816 1686..1 8115 98.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:14:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:25:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29928695..29930386 1692..1 8445 99.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:32:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 29669526..29671217 1692..1 8445 99.9 Minus
Blast to na_te.dros performed on 2019-03-16 11:25:44 has no hits.

IP12384.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:26:38 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 25751131..25752816 1..1686 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:52:15 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31202-RA 1..1581 4..1584 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:10:24 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31202-RA 1..1581 4..1584 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:35:26 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31202-RA 1..1581 4..1584 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:55:08 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31202-RA 1..1581 4..1584 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:16:59 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31202-RA 1..1581 4..1584 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:02:59 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31202-RA 1..1686 1..1686 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:10:24 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31202-RA 1..1686 1..1686 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:35:26 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31202-RA 1..1686 1..1686 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:55:08 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31202-RA 1..1686 1..1686 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:16:59 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31202-RA 1..1686 1..1686 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:26:38 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29928701..29930386 1..1686 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:26:38 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29928701..29930386 1..1686 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:26:38 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29928701..29930386 1..1686 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:35:26 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25754423..25756108 1..1686 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:30:17 Download gff for IP12384.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29669532..29671217 1..1686 100   Minus

IP12384.hyp Sequence

Translation from 0 to 1583

> IP12384.hyp
RMYFFFFVIRRAQYNWYTANTKSRIRIIATGIFTVGVIVITYIQCRAMMR
ESFQKNIPSNDNSLKDMNPDDMRAKIKEMMMHAWRNYARVVWGTNEFRPI
SRRVHFGGDFATYKLGATIIESLDTLHLMGLNKELRRSRDWIEKSFHLDR
VDEALSVYELTSRLLCPMLTLYSLTGDSLYMDKAIHIADKILPAFDTPTG
IPRRLVVPKEGSTLTKYLSDISRTSEFGSLHLEFYYLSEVSGYPVYRERV
DAIREILAKTTRPNGLYPNAYCTKFGKWENYNCSMHRLYDTLLKSWIQSG
RTDTQNADTFKEAMLAVAQNLVVINPEDVTYVSTFRNGTLFHRMRHSDCF
AGGLFVLGAAETQMKHWEKYAHIGIGLTDTCHDSYWSSPTRLGPDTFAFT
EESQQEIEPLQRNYYNLRPEVAETYLVLWRITHHPQYRLWGLEMVQAIEK
YCRMPYGYTGVMDVNNVTSEPDDVQGSFFLGSTLKYLYLLFSDDDVVSLE
QWVFNSAGHFLPIKGVNPMYRQHNSSN*

IP12384.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:46:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG31202-PA 526 CG31202-PA 1..526 2..527 2813 100 Plus
alpha-Man-I-PO 667 CG42275-PO 194..656 66..522 1223 51.2 Plus
alpha-Man-I-PN 667 CG42275-PN 194..656 66..522 1223 51.2 Plus
alpha-Man-I-PM 667 CG42275-PM 194..656 66..522 1223 51.2 Plus
alpha-Man-I-PL 667 CG42275-PL 194..656 66..522 1223 51.2 Plus

IP12384.pep Sequence

Translation from 3 to 1583

> IP12384.pep
MYFFFFVIRRAQYNWYTANTKSRIRIIATGIFTVGVIVITYIQCRAMMRE
SFQKNIPSNDNSLKDMNPDDMRAKIKEMMMHAWRNYARVVWGTNEFRPIS
RRVHFGGDFATYKLGATIIESLDTLHLMGLNKELRRSRDWIEKSFHLDRV
DEALSVYELTSRLLCPMLTLYSLTGDSLYMDKAIHIADKILPAFDTPTGI
PRRLVVPKEGSTLTKYLSDISRTSEFGSLHLEFYYLSEVSGYPVYRERVD
AIREILAKTTRPNGLYPNAYCTKFGKWENYNCSMHRLYDTLLKSWIQSGR
TDTQNADTFKEAMLAVAQNLVVINPEDVTYVSTFRNGTLFHRMRHSDCFA
GGLFVLGAAETQMKHWEKYAHIGIGLTDTCHDSYWSSPTRLGPDTFAFTE
ESQQEIEPLQRNYYNLRPEVAETYLVLWRITHHPQYRLWGLEMVQAIEKY
CRMPYGYTGVMDVNNVTSEPDDVQGSFFLGSTLKYLYLLFSDDDVVSLEQ
WVFNSAGHFLPIKGVNPMYRQHNSSN*

IP12384.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:49:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16219-PA 478 GF16219-PA 2..469 55..523 1563 60.6 Plus
Dana\GF22633-PA 670 GF22633-PA 197..659 65..521 1247 51.2 Plus
Dana\GF21701-PA 464 GF21701-PA 32..464 65..525 622 33.2 Plus
Dana\GF18725-PA 678 GF18725-PA 226..673 69..512 585 32.5 Plus
Dana\GF19471-PA 959 GF19471-PA 40..492 70..516 288 25.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:49:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11985-PA 465 GG11985-PA 1..456 71..526 2173 85.3 Plus
Dere\GG18934-PA 641 GG18934-PA 173..630 70..521 1215 50.4 Plus
Dere\GG12040-PA 685 GG12040-PA 233..680 69..512 601 33.3 Plus
Dere\GG12667-PA 984 GG12667-PA 40..492 70..516 288 26.1 Plus
Dere\GG23820-PA 890 GG23820-PA 485..583 414..512 170 36.6 Plus
Dere\GG23820-PA 890 GG23820-PA 107..392 31..299 159 23.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:49:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17781-PA 629 GH17781-PA 161..621 70..524 1220 50.1 Plus
Dgri\GH18910-PA 691 GH18910-PA 241..688 69..512 597 31.7 Plus
Dgri\GH17843-PA 995 GH17843-PA 37..491 70..516 278 26.7 Plus
Dgri\GH11090-PA 817 GH11090-PA 8..306 17..299 169 23.8 Plus
Dgri\GH11090-PA 817 GH11090-PA 399..497 414..512 165 35.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:28
Subject Length Description Subject Range Query Range Score Percent Strand
alpha-Man-Ic-PA 526 CG31202-PA 1..526 1..526 2813 100 Plus
alpha-Man-Ia-PO 667 CG42275-PO 194..656 65..521 1223 51.2 Plus
alpha-Man-Ia-PN 667 CG42275-PN 194..656 65..521 1223 51.2 Plus
alpha-Man-Ia-PM 667 CG42275-PM 194..656 65..521 1223 51.2 Plus
alpha-Man-Ia-PL 667 CG42275-PL 194..656 65..521 1223 51.2 Plus
alpha-Man-Ia-PH 667 CG32684-PG 194..656 65..521 1223 51.2 Plus
alpha-Man-Ia-PJ 667 CG42275-PJ 194..656 65..521 1223 51.2 Plus
alpha-Man-Ia-PI 684 CG42275-PI 205..673 63..521 1217 50.7 Plus
alpha-Man-Ia-PP 643 CG42275-PP 175..632 70..521 1203 50.9 Plus
alpha-Man-Ia-PK 643 CG42275-PK 175..632 70..521 1203 50.9 Plus
alpha-Man-Ib-PA 685 CG11874-PA 233..680 69..512 599 33 Plus
Edem1-PD 982 CG3810-PD 40..451 70..494 285 26.9 Plus
Edem1-PA 982 CG3810-PA 40..451 70..494 285 26.9 Plus
Edem1-PB 982 CG3810-PB 40..451 70..494 285 26.9 Plus
Edem1-PC 982 CG3810-PC 40..451 70..494 285 26.9 Plus
Edem1-PE 1004 CG3810-PE 40..451 70..494 285 26.9 Plus
Edem2-PB 792 CG5682-PB 32..494 51..512 252 24.1 Plus
Edem2-PA 801 CG5682-PA 32..494 51..512 252 24.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:49:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15126-PA 656 GI15126-PA 163..645 38..521 1265 49.4 Plus
Dmoj\GI23409-PA 676 GI23409-PA 226..673 69..512 575 31.6 Plus
Dmoj\GI21757-PA 971 GI21757-PA 37..449 70..496 278 27.7 Plus
Dmoj\GI17606-PA 811 GI17606-PA 395..493 414..512 170 36.6 Plus
Dmoj\GI17606-PA 811 GI17606-PA 36..302 56..299 160 25.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:49:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13496-PA 482 GL13496-PA 35..482 72..523 1357 53.3 Plus
Dper\GL15936-PA 667 GL15936-PA 193..656 65..521 1206 50 Plus
Dper\GL23057-PA 675 GL23057-PA 223..670 69..512 576 31.8 Plus
Dper\GL18344-PA 972 GL18344-PA 37..489 70..516 274 24.9 Plus
Dper\GL26304-PA 804 GL26304-PA 16..305 25..299 166 24.6 Plus
Dper\GL26304-PA 804 GL26304-PA 398..496 414..512 161 34.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:49:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16089-PA 482 GA16089-PA 35..482 72..523 1359 53.3 Plus
Dpse\GA17071-PA 461 GA17071-PA 1..450 78..521 1215 51.1 Plus
Dpse\GA11250-PA 681 GA11250-PA 229..676 69..512 579 31.8 Plus
Dpse\GA17701-PA 972 GA17701-PA 37..489 70..516 274 24.9 Plus
Dpse\GA19052-PA 804 GA19052-PA 16..305 25..299 170 24.4 Plus
Dpse\GA19052-PA 804 GA19052-PA 398..496 414..512 161 34.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:49:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12204-PA 516 GM12204-PA 1..516 1..526 2611 91.6 Plus
Dsec\GM11326-PA 647 GM11326-PA 179..636 70..521 1220 50.7 Plus
Dsec\GM12266-PA 685 GM12266-PA 233..680 69..512 600 33.1 Plus
Dsec\GM18936-PA 984 GM18936-PA 40..492 70..516 286 26.2 Plus
Dsec\GM10224-PA 801 GM10224-PA 398..494 416..512 166 36.4 Plus
Dsec\GM10224-PA 801 GM10224-PA 18..303 31..299 159 23.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:49:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17544-PA 526 GD17544-PA 1..526 1..526 2691 93.5 Plus
Dsim\GD24646-PA 678 GD24646-PA 334..669 70..399 868 48.8 Plus
Dsim\GD17996-PA 561 GD17996-PA 109..556 69..512 600 33.1 Plus
Dsim\GD16401-PA 984 GD16401-PA 40..451 70..494 285 27.4 Plus
Dsim\GD23871-PA 801 GD23871-PA 398..494 416..512 167 36.4 Plus
Dsim\GD23871-PA 801 GD23871-PA 18..303 31..299 161 23.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:49:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18983-PA 655 GJ18983-PA 182..644 65..521 1244 51 Plus
Dvir\GJ10615-PA 684 GJ10615-PA 234..681 69..512 583 31.8 Plus
Dvir\GJ19135-PA 967 GJ19135-PA 37..450 70..496 279 27.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:49:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25495-PA 665 GK25495-PA 192..647 72..521 1235 51.1 Plus
Dwil\GK18972-PA 477 GK18972-PA 3..472 56..520 1220 48.9 Plus
Dwil\GK22601-PA 1215 GK22601-PA 227..673 69..511 589 32.3 Plus
Dwil\GK22601-PA 1215 GK22601-PA 767..1210 69..511 573 31.7 Plus
Dwil\GK16271-PA 968 GK16271-PA 40..453 70..496 283 27.1 Plus
Dwil\GK14543-PA 811 GK14543-PA 34..305 51..299 172 24.4 Plus
Dwil\GK14543-PA 811 GK14543-PA 398..496 414..512 169 36.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:49:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15405-PA 669 GE15405-PA 201..658 70..521 1214 50.4 Plus
Dyak\GE10478-PA 674 GE10478-PA 222..669 69..512 598 33.1 Plus
Dyak\GE11059-PA 97 GE11059-PA 1..97 430..526 468 86.6 Plus
Dyak\GE16995-PA 985 GE16995-PA 41..485 70..508 287 26.3 Plus
Dyak\GE18623-PA 801 GE18623-PA 398..494 416..512 170 37.4 Plus
Dyak\GE18623-PA 801 GE18623-PA 18..303 31..299 159 23.9 Plus