Clone IP12417 Report

Search the DGRC for IP12417

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:124
Well:17
Vector:pOT2
Associated Gene/TranscriptCG32238-RA
Protein status:IP12417.pep: gold
Preliminary Size:1464
Sequenced Size:2056

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32238 2005-01-01 Successful iPCR screen
CG32238 2008-04-29 Release 5.5 accounting
CG32238 2008-08-15 Release 5.9 accounting
CG32238 2008-12-18 5.12 accounting

Clone Sequence Records

IP12417.complete Sequence

2056 bp (2056 high quality bases) assembled on 2006-05-24

GenBank Submission: BT025844

> IP12417.complete
CCGAGCTGAACGTCCACTTTCAAACACACACACACTATTTGCCGAATAAA
GCGAAAAAATAAAAGAACCCCTGAAAAGCTGAGGAGAAAAAATTCAAGTG
CACATAATTTGGCCATCACACAGTGCACAGATTTTGTGAGGGGGTAAATT
TTTGGCATTTTTGCAGCTCAACTTGCTAAACTATTTGAAAATTTTGGTGC
AGCGCTTTTCGCCTCTTTCGACTTTCCCACACCAAAAAAAAAACAAAACA
AAAACGAAAATAAATAATTTTATATAGAAATACAAAAGGAGTGCCGCCTG
GCAACCATGCCCCACATTTTAACGCCACAAGAAGGCAAAAAAGGGTGGTG
AATAAATTTCGGCTTTGTTGGTTCAATAAACTGGAACGTTGGCAACATGG
CCGTTGTTTGGGACATGAGTCAATGGACGCAGGCGTGGCGGATCGACAGT
CTGCATCCGACGGTCCGCTCGAGCGGTACAAGAACCACAACGAGCGGTAC
AATCATGTACGGTCGCACGTCGGTCGGTGCAAATCAATCCGTGACGAATG
GCAACTCAAATAGTGGCGCAAATAGCGGCGGTGGTGCCAGTGGTGGTGCC
CAGGGACACGATAAACTGAAAATTGGCTTCTGCACGGACCTGGATAAATC
GGTTTTGGTCAACAATTTCGAGAAACGTGGCTGGCATCAGGTGAATGGCG
ATGATGATTGGCATTTCTATTGGGCCGGAGTGCAAACCTGCCGGAATATA
TTCAGTGTGGATAGTGGTTATAGGATGCACGATAACCAGATGATCAATCA
TTTTCCCAATCACTATGAATTATCACGCAAGGATTTACTGGTCAAGAACA
TCAAGCGTTATCGCAAGGATCTCGAGAGGGATGGCAATCCATTGGCGGAG
AAAACAGAGTCCAATAACTCCAGTGGCACCAGATATCTTTATTTGGATTT
TGTGCCAACAACTTTTGTCCTGCCAGCCGATTATAATATGTTCGTGGAGG
AGTATCGCAAGTTTCCGCTGAGTACGTGGATTATGAAACCCTGTGGAAAA
TCCCAAGGAGCGGGTATATTCCTTATAAACAAACTATCCAAACTCAAGAA
GTGGTCAAGAGAGGCCAAGGGTCCTTTTCATCCACAAATAGCCAAGGAAT
CGTATGTGATATCCAGATACATAGACAATCCACTATTGATTGGTGGTAAA
AAATTTGATCTTCGTCTATATGTTCTAGTCGCTTCGTTCAGACCCCTGAA
AGCTTATCTTTTTAAGCAGGGATTCTGCCGTTTTTGTACTGTAAAATACG
ATACTAGTGTTACGGAACTGGATAATATGTACGTCCATCTGACAAATGTG
AGTGTGCAGAAACATGGTGGCGAATACAATACCCTACATGGTGGCAAGTG
GTCTGTACAAAATCTGGCCCTCTATTTGGAAGGAACTCGGGGAAAAGAGG
TTACGGATCGTTTGTTTGGAGCCATATCCTGGCTTATAGTACACTCCTTA
AGAGCTGTGGCTCCTGTGATGGCCAGTGATAGGCATTGTTTTGAGTGTTA
TGGCTACGACATCATCATAGACAATGCCTTGAAACCTTGGCTAGTGGAGG
TGAATGCCTCACCGTCACTCACATCAACTACAGTAAACGACAGGATACTA
AAATACAAACTGATTGACAACATACTGTCCGTGGTCCTACCCCCCGATGG
AGTGCCCGATGTGCGTTGGAATAAGGTTCCCAGTGCCGATGCTTTGGGCA
ACTTTGAGCTGCTCATCGATGAGGAGTTGGCCGCCCAGGATGAACAACAC
CAAAATAGCAGCAGCAACACTCATAGTAAAACATCCAAAATGGGCAGCCG
ATGGAAGTGACGAAAGTAGATTTGGGGAGGGTTGGGTCATTCGATACTAT
ATATTAACTGGTTCAGTGAAGTGCTAAGAAAAATGTATGAAAATAAACGA
ATAGCACTTGGACTCAATAGTTGTTGTTAAATAACATTATACGAAAGGAG
CAAAAGTAAAATAAATAATATATATAATATAAAAAAAAAAAAAAAAAAAA
AAAAAA

IP12417.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG32238-RA 2031 CG32238-RA 1..2031 1..2031 10155 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4647621..4649648 1..2030 9770 98.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:14:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:39:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4648276..4650306 1..2031 10155 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:10:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 4648276..4650306 1..2031 10155 100 Plus
Blast to na_te.dros performed on 2019-03-16 23:40:00 has no hits.

IP12417.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:40:54 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4647621..4649624 1..2006 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:52:28 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
CG32238-RA 1..1464 397..1860 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:29:11 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
CG32238-RA 1..1464 397..1860 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:46:41 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
CG32238-RA 1..1464 397..1860 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:54:06 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
CG32238-RA 1..1464 397..1860 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:54:35 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
CG32238-RA 1..1464 397..1860 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:00:38 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
CG32238-RA 1..2030 1..2030 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:29:11 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
CG32238-RA 1..2030 1..2030 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:46:41 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
CG32238-RA 1..2030 1..2030 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:54:06 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
CG32238-RA 1..2030 1..2030 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:54:35 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
CG32238-RA 1..2030 1..2030 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:40:54 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4648276..4650305 1..2030 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:40:54 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4648276..4650305 1..2030 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:40:54 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4648276..4650305 1..2030 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:46:41 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4648276..4650305 1..2030 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:55:15 Download gff for IP12417.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4648276..4650305 1..2030 100   Plus

IP12417.hyp Sequence

Translation from 396 to 1859

> IP12417.hyp
MAVVWDMSQWTQAWRIDSLHPTVRSSGTRTTTSGTIMYGRTSVGANQSVT
NGNSNSGANSGGGASGGAQGHDKLKIGFCTDLDKSVLVNNFEKRGWHQVN
GDDDWHFYWAGVQTCRNIFSVDSGYRMHDNQMINHFPNHYELSRKDLLVK
NIKRYRKDLERDGNPLAEKTESNNSSGTRYLYLDFVPTTFVLPADYNMFV
EEYRKFPLSTWIMKPCGKSQGAGIFLINKLSKLKKWSREAKGPFHPQIAK
ESYVISRYIDNPLLIGGKKFDLRLYVLVASFRPLKAYLFKQGFCRFCTVK
YDTSVTELDNMYVHLTNVSVQKHGGEYNTLHGGKWSVQNLALYLEGTRGK
EVTDRLFGAISWLIVHSLRAVAPVMASDRHCFECYGYDIIIDNALKPWLV
EVNASPSLTSTTVNDRILKYKLIDNILSVVLPPDGVPDVRWNKVPSADAL
GNFELLIDEELAAQDEQHQNSSSNTHSKTSKMGSRWK*

IP12417.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:47:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG32238-PA 487 CG32238-PA 1..487 1..487 2612 100 Plus
CG8918-PA 496 CG8918-PA 56..465 76..484 1290 59.8 Plus
CG31108-PB 917 CG31108-PB 213..556 73..440 449 33.2 Plus
CG31108-PA 917 CG31108-PA 213..556 73..440 449 33.2 Plus
CG16833-PM 827 CG16833-PM 344..655 95..431 439 32 Plus

IP12417.pep Sequence

Translation from 396 to 1859

> IP12417.pep
MAVVWDMSQWTQAWRIDSLHPTVRSSGTRTTTSGTIMYGRTSVGANQSVT
NGNSNSGANSGGGASGGAQGHDKLKIGFCTDLDKSVLVNNFEKRGWHQVN
GDDDWHFYWAGVQTCRNIFSVDSGYRMHDNQMINHFPNHYELSRKDLLVK
NIKRYRKDLERDGNPLAEKTESNNSSGTRYLYLDFVPTTFVLPADYNMFV
EEYRKFPLSTWIMKPCGKSQGAGIFLINKLSKLKKWSREAKGPFHPQIAK
ESYVISRYIDNPLLIGGKKFDLRLYVLVASFRPLKAYLFKQGFCRFCTVK
YDTSVTELDNMYVHLTNVSVQKHGGEYNTLHGGKWSVQNLALYLEGTRGK
EVTDRLFGAISWLIVHSLRAVAPVMASDRHCFECYGYDIIIDNALKPWLV
EVNASPSLTSTTVNDRILKYKLIDNILSVVLPPDGVPDVRWNKVPSADAL
GNFELLIDEELAAQDEQHQNSSSNTHSKTSKMGSRWK*

IP12417.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:49:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25086-PA 448 GF25086-PA 1..448 37..487 2295 94.9 Plus
Dana\GF22625-PA 516 GF22625-PA 65..447 76..457 1286 61.4 Plus
Dana\GF17100-PA 925 GF17100-PA 218..560 73..440 464 33.1 Plus
Dana\GF15840-PA 1097 GF15840-PA 587..940 57..433 433 30.3 Plus
Dana\GF15040-PA 1003 GF15040-PA 401..805 11..433 389 27.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:49:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15242-PA 487 GG15242-PA 1..487 1..487 2587 98.6 Plus
Dere\GG18198-PA 495 GG18198-PA 53..437 73..456 1309 62.9 Plus
Dere\GG12287-PA 917 GG12287-PA 205..556 65..440 473 34.1 Plus
Dere\GG23690-PA 1068 GG23690-PA 585..901 95..433 441 32.1 Plus
Dere\GG24974-PA 988 GG24974-PA 401..792 22..433 388 28.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:49:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24113-PA 488 GH24113-PA 19..488 7..487 2178 88.8 Plus
Dgri\GH15692-PA 488 GH15692-PA 19..488 7..487 2178 88.8 Plus
Dgri\GH12651-PA 519 GH12651-PA 28..424 76..471 1317 60.8 Plus
Dgri\GH18049-PA 921 GH18049-PA 169..547 48..440 468 31.4 Plus
Dgri\GH10972-PA 1078 GH10972-PA 574..927 57..433 454 31.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:56
Subject Length Description Subject Range Query Range Score Percent Strand
TTLL1B-PA 487 CG32238-PA 1..487 1..487 2612 100 Plus
TTLL1A-PA 496 CG8918-PA 56..465 76..484 1290 59.8 Plus
TTLL5-PB 917 CG31108-PB 213..556 73..440 449 33.2 Plus
TTLL5-PA 917 CG31108-PA 213..556 73..440 449 33.2 Plus
TTLL4A-PM 827 CG16833-PM 344..655 95..431 439 32 Plus
TTLL4A-PK 827 CG16833-PK 344..655 95..431 439 32 Plus
TTLL4A-PF 828 CG16833-PF 344..655 95..431 439 32 Plus
TTLL4A-PE 828 CG16833-PE 344..655 95..431 439 32 Plus
TTLL4A-PN 1070 CG16833-PN 587..898 95..431 439 32 Plus
TTLL4A-PL 1070 CG16833-PL 587..898 95..431 439 32 Plus
TTLL4A-PI 1070 CG16833-PI 587..898 95..431 439 32 Plus
TTLL4A-PH 1071 CG16833-PH 587..898 95..431 439 32 Plus
TTLL4A-PG 1071 CG16833-PG 587..898 95..431 439 32 Plus
TTLL4A-PD 1071 CG16833-PD 587..898 95..431 439 32 Plus
TTLL4B-PA 982 CG3964-PA 470..809 84..455 392 29.1 Plus
TTLL4B-PC 989 CG3964-PC 470..809 84..455 392 29.1 Plus
TTLL4B-PB 989 CG3964-PB 470..809 84..455 392 29.1 Plus
TTLL6B-PA 720 CG5987-PA 145..475 75..430 367 29.7 Plus
TTLL6A-PC 867 CG16716-PC 129..460 74..430 323 28 Plus
TTLL3A-PA 992 CG11323-PA 418..649 211..455 256 30.7 Plus
TTLL3B-PB 756 CG11201-PB 403..637 211..458 207 30 Plus
TTLL15-PA 516 CG4089-PA 94..387 87..423 196 21.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:49:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12743-PA 498 GI12743-PA 36..498 7..487 2241 88.2 Plus
Dmoj\GI15047-PA 535 GI15047-PA 51..449 76..473 1324 61.5 Plus
Dmoj\GI23779-PA 859 GI23779-PA 106..486 39..440 473 32.2 Plus
Dmoj\GI18156-PA 818 GI18156-PA 300..653 57..433 437 30.6 Plus
Dmoj\GI22299-PA 714 GI22299-PA 150..480 75..430 379 30.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:49:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17911-PA 480 GL17911-PA 9..480 7..487 2241 89.2 Plus
Dper\GL19844-PA 508 GL19844-PA 36..425 68..456 1295 61.3 Plus
Dper\GL21939-PA 929 GL21939-PA 213..555 73..440 495 34.6 Plus
Dper\GL19014-PA 1052 GL19014-PA 567..883 95..433 439 31.8 Plus
Dper\GL18685-PA 977 GL18685-PA 458..778 84..433 396 30.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:49:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16777-PA 480 GA16777-PA 9..480 7..487 2244 89.4 Plus
Dpse\GA21409-PA 508 GA21409-PA 36..425 68..456 1292 61.4 Plus
Dpse\GA16014-PA 929 GA16014-PA 206..555 66..440 498 34.5 Plus
Dpse\GA17808-PA 983 GA17808-PA 461..784 84..433 391 30 Plus
Dpse\GA19278-PA 694 GA19278-PA 130..460 75..430 362 29.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:49:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14674-PA 487 GM14674-PA 1..487 1..487 2610 99.2 Plus
Dsec\GM13333-PA 495 GM13333-PA 56..448 76..467 1312 61.4 Plus
Dsec\GM17750-PA 918 GM17750-PA 172..573 35..450 473 31.6 Plus
Dsec\GM18785-PA 559 GM18785-PA 76..392 95..433 436 32.1 Plus
Dsec\GM18444-PA 986 GM18444-PA 467..806 84..455 390 29.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:49:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13857-PA 487 GD13857-PA 1..487 1..487 2615 99.4 Plus
Dsim\GD15693-PA 495 GD15693-PA 56..448 76..467 1310 61.4 Plus
Dsim\GD18234-PA 931 GD18234-PA 213..572 73..450 472 33.7 Plus
Dsim\GD23748-PA 1066 GD23748-PA 612..898 131..433 427 32.9 Plus
Dsim\GD23261-PA 986 GD23261-PA 467..806 84..455 390 29.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:49:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15513-PA 490 GJ15513-PA 27..465 7..466 2120 88.5 Plus
Dvir\GJ14703-PA 528 GJ14703-PA 49..441 76..466 1352 64 Plus
Dvir\GJ23611-PA 901 GJ23611-PA 158..528 42..440 472 31.9 Plus
Dvir\GJ14582-PA 1058 GJ14582-PA 571..887 95..433 445 32.4 Plus
Dvir\GJ16303-PA 1000 GJ16303-PA 476..799 84..433 384 29.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:49:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16596-PA 507 GK16596-PA 27..507 7..487 2251 87.8 Plus
Dwil\GK25136-PA 546 GK25136-PA 41..433 65..457 1325 63.5 Plus
Dwil\GK13885-PA 749 GK13885-PA 34..376 73..440 494 34.4 Plus
Dwil\GK15248-PA 861 GK15248-PA 337..690 57..433 441 31.3 Plus
Dwil\GK15485-PA 1039 GK15485-PA 509..832 84..433 390 29.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:50:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21463-PA 487 GE21463-PA 1..487 1..487 2592 98.4 Plus
Dyak\GE15616-PA 495 GE15616-PA 56..438 76..457 1311 62.7 Plus
Dyak\GE10739-PA 917 GE10739-PA 205..556 65..440 475 34.1 Plus
Dyak\GE18502-PA 1068 GE18502-PA 585..901 95..433 441 32.1 Plus
Dyak\GE18264-PA 990 GE18264-PA 403..794 22..433 390 28.1 Plus