Clone IP12451 Report

Search the DGRC for IP12451

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:124
Well:51
Vector:pOT2
Associated Gene/TranscriptCG6034-RA
Protein status:IP12451.pep: gold
Preliminary Size:1440
Sequenced Size:1744

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6034 2005-01-01 Successful iPCR screen
CG6034 2008-04-29 Release 5.5 accounting
CG6034 2008-08-15 Release 5.9 accounting
CG6034 2008-12-18 5.12 accounting

Clone Sequence Records

IP12451.complete Sequence

1744 bp (1744 high quality bases) assembled on 2006-01-24

GenBank Submission: BT024298

> IP12451.complete
CTCAAGCTTAAGCAATCCACAAAGAAAATTAATCCTGTTCCTCAAATCAT
GAGTGCCTGTTCAGAACCAACTACTTTTTCAAAAACCAAGGAGACGGCCA
AGATCGTCATAATCGGAGCTGGTGCTTCGGGAGTAGCAGCAGCTACTAAA
CTTTTGGAACAAGGATTCAAAAATGTCCTGCTCTTCGAGGCGGAAGACCG
GATTGGAGGTCGCATCAACACGATCCTGTTTGCCAACAGCTTAATCGATC
TGGGTGCTCAATGGTGCCACGGTGAAGAAGGAAATGTTGTCTATGAAAAA
GTTAAGGACCTGGATGTCCTCGACAGGACCGGCGACTATGTCGTTCACTT
TATTCGCTCTAACAAGGAAATTCTCACTGACGTTCATAACAAGGCTCTTA
CGGAATTGACGAACGCATTTGAGGTGCCTGGCGAACATGAGGGTTCCGTA
GGTGATGCCTTTAATGCCTATTGGAAGGAGAATATCCATCAGTTGGTTCC
GAACGATAAGACCATTGCCAAGGAGGCCCAAGACTGCCTGAAAAAGGTAA
TTTGCAGCATGGATGCTTGCGATAATTTGTCCGAGCTTTCTTACCGAAAT
TTCCGGAACTTTGCTATTGCCGGTGGGGATCAAAATCTCAGCTGGCGGCA
AAAGGGCTATTGGAAATTTTTGAGTGTCCTGCTAAATTCTAGCGATAATC
AGCCCGGTGACCAGGGAATTCTTAAAGGACATGTGCATCTCAACAAACGA
ATTGCTAAGATCAATTGGGAAGGAGATGGTGAATTGACTCTCCGCTGCTG
GAACGGCCAATTTGTTTCAGCGGATCATGTGATTTGTACTGTCTCATTGG
GGGTTCTCAGGGAAAAGCACCATAAGCTCTTTGTACCAGCTCTGCCAGCC
TCCAAGATCAGGTCGATAGAGGGTCTCAAACTGGGGACAGTGAACAAGTT
CTATTTGGAGTTTGAGGAGCAGCCAGTGCCGGAAAACATTAGAGAAATGG
CGTTCCTTTGGCTTGAGGAAGATCTAAAGGAGCTACGAAGTGGCAAATAC
TTTTGGCTGGAGAGTGTTTGTTATTTTCATCGTGTGGATTGTCAACCGCG
TTTGTTACAGGGATGGATCATTGGTGCCCACTCGCGGTACGTTGAAACCA
TCAGCGAGGAGCAGGTCCTCGAGGGAATTATGTGGATGTTTAGGAAGTTT
CTTAAGTTTTCCGTACCCTACCCAAAAAACTTTTTGCGCTCTCAATGGCA
ATCTAATCCGAACTTCCGCGGCTCTTATAGTTACTACTCCACTTACGCTG
ATGAACTCCGTACGGGACGCACGGATTTGGCATCACCTTTGGTGGATGTA
ACTGGAAGACCGAGGATACAATTCGCCGGAGAGGCTTCGAGCCGGAACCA
CTTCTCTACGGTCCACGGAGCCATTGAGTCGGGATGGCGCGAGGCAGAGC
GACTCAATGAATTCTACGAAGGACGAGCTGCAAACTAAGGCAATATTCGA
AGCGCCCAAATGGGATCATTCAATTGCAATACATTTTCCTAAACGCAATC
ATGATGTACGACAATCAAGCATTGCTTGTTTGTCCAAAGAAATAATCAAA
TTAAGGCATTTATATTATAATTTTACATCATTGTTCATTTAATAATTAGA
CGAATTACTAGCAACAACAATAAATTATTTAAGAGCTCAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP12451.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:19:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG6034-RA 1688 CG6034-RA 1..1688 1..1688 8440 100 Plus
CG7460-RB 1461 CG7460-RB 788..936 818..966 235 77.1 Plus
CG7460-RB 1461 CG7460-RB 120..261 171..312 215 76.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:29:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 17734804..17736491 1688..1 8425 99.9 Minus
chr3L 24539361 chr3L 17731148..17731384 730..966 285 74.7 Plus
chr3L 24539361 chr3L 17730568..17730709 171..312 215 76.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:15:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:29:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17745172..17746860 1689..1 8445 100 Minus
3L 28110227 3L 17741524..17741760 730..966 285 74.7 Plus
3L 28110227 3L 17740944..17741085 171..312 215 76.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:12:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 17738272..17739960 1689..1 8445 100 Minus
3L 28103327 3L 17734712..17734860 818..966 235 77.1 Plus
3L 28103327 3L 17734044..17734185 171..312 215 76.7 Plus
Blast to na_te.dros performed on 2019-03-15 15:29:30 has no hits.

IP12451.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:30:35 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 17734804..17736491 1..1688 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:52:37 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
CG6034-RA 1..1440 49..1488 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:35:04 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
CG6034-RA 1..1440 49..1488 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:30:03 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
CG6034-RA 1..1440 49..1488 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:09:31 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
CG6034-RA 1..1440 49..1488 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:07:49 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
CG6034-RA 1..1440 49..1488 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:06:25 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
CG6034-RA 1..1440 49..1488 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:35:04 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
CG6034-RA 1..1688 1..1688 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:30:03 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
CG6034-RA 1..1688 1..1688 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:09:32 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
CG6034-RA 1..1440 49..1488 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:07:49 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
CG6034-RA 1..1688 1..1688 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:35 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17745173..17746860 1..1688 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:35 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17745173..17746860 1..1688 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:35 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17745173..17746860 1..1688 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:30:03 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17738273..17739960 1..1688 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:58:58 Download gff for IP12451.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17738273..17739960 1..1688 100   Minus

IP12451.hyp Sequence

Translation from 0 to 1487

> IP12451.hyp
LKLKQSTKKINPVPQIMSACSEPTTFSKTKETAKIVIIGAGASGVAAATK
LLEQGFKNVLLFEAEDRIGGRINTILFANSLIDLGAQWCHGEEGNVVYEK
VKDLDVLDRTGDYVVHFIRSNKEILTDVHNKALTELTNAFEVPGEHEGSV
GDAFNAYWKENIHQLVPNDKTIAKEAQDCLKKVICSMDACDNLSELSYRN
FRNFAIAGGDQNLSWRQKGYWKFLSVLLNSSDNQPGDQGILKGHVHLNKR
IAKINWEGDGELTLRCWNGQFVSADHVICTVSLGVLREKHHKLFVPALPA
SKIRSIEGLKLGTVNKFYLEFEEQPVPENIREMAFLWLEEDLKELRSGKY
FWLESVCYFHRVDCQPRLLQGWIIGAHSRYVETISEEQVLEGIMWMFRKF
LKFSVPYPKNFLRSQWQSNPNFRGSYSYYSTYADELRTGRTDLASPLVDV
TGRPRIQFAGEASSRNHFSTVHGAIESGWREAERLNEFYEGRAAN*

IP12451.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:47:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG6034-PA 479 CG6034-PA 1..479 17..495 2545 100 Plus
CG7460-PC 486 CG7460-PC 10..484 27..494 1404 56 Plus
CG7460-PB 486 CG7460-PB 10..484 27..494 1404 56 Plus
CG5653-PA 476 CG5653-PA 3..469 28..489 1167 48.3 Plus
CG7737-PA 509 CG7737-PA 4..496 27..489 959 42.1 Plus

IP12451.pep Sequence

Translation from 48 to 1487

> IP12451.pep
MSACSEPTTFSKTKETAKIVIIGAGASGVAAATKLLEQGFKNVLLFEAED
RIGGRINTILFANSLIDLGAQWCHGEEGNVVYEKVKDLDVLDRTGDYVVH
FIRSNKEILTDVHNKALTELTNAFEVPGEHEGSVGDAFNAYWKENIHQLV
PNDKTIAKEAQDCLKKVICSMDACDNLSELSYRNFRNFAIAGGDQNLSWR
QKGYWKFLSVLLNSSDNQPGDQGILKGHVHLNKRIAKINWEGDGELTLRC
WNGQFVSADHVICTVSLGVLREKHHKLFVPALPASKIRSIEGLKLGTVNK
FYLEFEEQPVPENIREMAFLWLEEDLKELRSGKYFWLESVCYFHRVDCQP
RLLQGWIIGAHSRYVETISEEQVLEGIMWMFRKFLKFSVPYPKNFLRSQW
QSNPNFRGSYSYYSTYADELRTGRTDLASPLVDVTGRPRIQFAGEASSRN
HFSTVHGAIESGWREAERLNEFYEGRAAN*

IP12451.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:20:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23894-PA 478 GF23894-PA 1..475 1..476 1686 66.9 Plus
Dana\GF10138-PA 472 GF10138-PA 1..468 10..473 1030 45.4 Plus
Dana\GF12528-PA 509 GF12528-PA 11..496 18..473 978 43.5 Plus
Dana\GF18451-PA 594 GF18451-PA 45..566 13..469 464 28 Plus
Dana\GF14703-PA 514 GF14703-PA 39..506 14..473 406 26.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:20:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15789-PA 477 GG15789-PA 1..477 1..479 2095 82.9 Plus
Dere\GG15049-PA 476 GG15049-PA 1..475 10..479 1188 47.7 Plus
Dere\GG20170-PA 509 GG20170-PA 11..496 18..473 949 42.7 Plus
Dere\GG11620-PA 583 GG11620-PA 34..555 11..469 444 27.6 Plus
Dere\GG21160-PA 504 GG21160-PA 35..497 13..473 431 26.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:20:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15343-PA 478 GH15343-PA 1..474 1..473 1473 57.5 Plus
Dgri\GH18003-PA 616 GH18003-PA 134..615 1..478 1397 57.1 Plus
Dgri\GH15342-PA 481 GH15342-PA 3..480 5..478 1384 57.4 Plus
Dgri\GH19935-PA 519 GH19935-PA 1..495 10..473 967 42.8 Plus
Dgri\GH18004-PA 306 GH18004-PA 1..306 1..305 857 54.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG6034-PA 479 CG6034-PA 1..479 1..479 2545 100 Plus
CG7460-PC 486 CG7460-PC 10..484 11..478 1404 56 Plus
CG7460-PB 486 CG7460-PB 10..484 11..478 1404 56 Plus
CG5653-PA 476 CG5653-PA 3..469 12..473 1167 48.3 Plus
CG7737-PA 509 CG7737-PA 4..496 11..473 959 42.1 Plus
CG7737-PB 543 CG7737-PB 38..530 11..473 959 42.1 Plus
CG8032-PB 583 CG8032-PB 27..555 3..469 441 28.5 Plus
CG8032-PA 583 CG8032-PA 27..555 3..469 441 28.5 Plus
CG10561-PA 504 CG10561-PA 36..497 14..473 407 27.3 Plus
Su(var)3-3-PC 870 CG17149-PC 580..810 248..475 226 32.4 Plus
Su(var)3-3-PB 890 CG17149-PB 600..830 248..475 226 32.4 Plus
Su(var)3-3-PA 890 CG17149-PA 600..830 248..475 226 32.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:20:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12948-PA 494 GI12948-PA 15..480 12..473 1445 55.7 Plus
Dmoj\GI12947-PA 480 GI12947-PA 2..480 4..478 1358 55.4 Plus
Dmoj\GI12393-PA 478 GI12393-PA 4..475 13..477 1322 55 Plus
Dmoj\GI19892-PA 508 GI19892-PA 1..497 10..473 994 43.7 Plus
Dmoj\GI19893-PA 452 GI19893-PA 3..438 50..473 624 36.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:20:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11895-PA 472 GL11895-PA 3..469 12..474 1310 53.4 Plus
Dper\GL19976-PA 508 GL19976-PA 11..500 18..479 959 42.3 Plus
Dper\GL25224-PA 176 GL25224-PA 26..176 327..477 612 70.9 Plus
Dper\GL23965-PA 596 GL23965-PA 49..567 17..469 466 29.1 Plus
Dper\GL25222-PA 162 GL25222-PA 1..153 1..144 387 60.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:20:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19311-PA 482 GA19311-PA 1..482 1..477 1613 64.6 Plus
Dpse\GA20369-PA 486 GA20369-PA 1..485 1..479 1413 57.5 Plus
Dpse\GA19035-PA 472 GA19035-PA 3..469 12..474 1317 53.4 Plus
Dpse\GA20553-PA 508 GA20553-PA 11..500 18..479 963 42.5 Plus
Dpse\GA20779-PA 596 GA20779-PA 49..567 17..469 465 29.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:20:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24313-PA 479 GM24313-PA 1..479 1..479 2303 91.2 Plus
Dsec\GM24902-PA 476 GM24902-PA 1..469 10..473 1188 48.5 Plus
Dsec\GM21259-PA 509 GM21259-PA 11..496 18..473 957 43.1 Plus
Dsec\GM23747-PA 583 GM23747-PA 27..555 3..469 456 28.3 Plus
Dsec\GM17327-PA 504 GM17327-PA 32..497 10..473 434 26.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:20:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12383-PA 479 GD12383-PA 1..479 1..479 2323 91.9 Plus
Dsim\GD12952-PA 476 GD12952-PA 1..469 10..473 1183 48.6 Plus
Dsim\GD10773-PA 509 GD10773-PA 11..496 18..473 957 43.1 Plus
Dsim\GD18558-PA 583 GD18558-PA 27..555 3..469 454 28.1 Plus
Dsim\GD24185-PA 465 GD24185-PA 36..458 14..473 310 24.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13090-PA 487 GJ13090-PA 1..480 1..473 1471 57.8 Plus
Dvir\GJ13089-PA 476 GJ13089-PA 5..475 12..478 1448 58.4 Plus
Dvir\GJ12284-PA 486 GJ12284-PA 1..485 1..479 1345 54.4 Plus
Dvir\GJ15061-PA 505 GJ15061-PA 1..494 10..473 978 43.5 Plus
Dvir\GJ15062-PA 513 GJ15062-PA 34..510 15..474 744 34.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12329-PA 490 GK12329-PA 7..490 1..479 1424 56.6 Plus
Dwil\GK12302-PA 486 GK12302-PA 9..482 10..476 1370 57.1 Plus
Dwil\GK19228-PA 473 GK19228-PA 1..470 10..473 1353 57.1 Plus
Dwil\GK12300-PA 469 GK12300-PA 1..467 10..473 1232 52 Plus
Dwil\GK19151-PA 467 GK19151-PA 1..465 10..473 1111 49.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22127-PA 477 GE22127-PA 1..477 1..479 2159 84.8 Plus
Dyak\GE21272-PA 476 GE21272-PA 1..474 10..478 1172 47.8 Plus
Dyak\GE12859-PA 509 GE12859-PA 11..496 18..473 947 42.7 Plus
Dyak\GE25891-PA 583 GE25891-PA 41..555 18..469 462 28.4 Plus
Dyak\GE13233-PA 504 GE13233-PA 35..497 13..473 439 27.1 Plus