Clone IP12463 Report

Search the DGRC for IP12463

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:124
Well:63
Vector:pOT2
Associated Gene/TranscriptCG7194-RA
Protein status:IP12463.pep: gold
Preliminary Size:1341
Sequenced Size:1340

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7194 2005-01-01 Successful iPCR screen
CG7194 2008-04-29 Release 5.5 accounting
CG7194 2008-08-15 Release 5.9 accounting
CG7194 2008-12-18 5.12 accounting

Clone Sequence Records

IP12463.complete Sequence

1340 bp assembled on 2006-11-09

GenBank Submission: BT022230

> IP12463.complete
TTCAACGTTAGGCTTCTGTGAAAAAATGAGTACCGCTAATCATTTTCAAA
GAATTCTTGAGAAATTGTCAATCTCTGACAATGAAAGGGCCGTATATACC
AAGGAAGCCGAGGAAATTCAAAACTATGTAGTTGACGAACTTAAGCGGGT
AGACAAAACCTTTCGCCAGGTATTCGACGGACTCAGTCTTGGAGGAAGTT
ACTTGGATCGCGTCAAGCTAAATTTGCCCGATGAATTTGATCTGCACATG
AAACTAAAGTTTCCATTTGATATCCGACCGACTCGGATCGACCAAGGGTT
TATTTATTTAGAGGCTGATCTCACCGTAATCAATCCCCAACGCATCCATC
GTATTGTACTTCAAGACTGGCTACGCAATGCATTCCGCAAGGTATTCAGG
TCTAATCAGACAATTGCCACTACCAGTAATCGAGTCTACAAATTAACCTA
TACTCTTGAGGGGTATGGTTGTGCCCATACCATTTTAGCCGTTTGTGGTA
GTCGCTCGATATCTTTTGATTTGGTACCAGCATTCGAATTCTCTGGAAGC
CAATGGCCGTTTGATATTTGCCCGGTTCCTGCTGATGTTAGCAATAATTG
GCCATGGTTCGCCATTCCGCAACAGAAGAAGAAGTCGGCTAAACCGAGAA
CCACATTCATGGTTTGTGCACCACATTGGGAGCGCGAAATTATGAAGGGC
AAGGATAATTTGAAGAACGTTCTACGGCTGATGAAAGGATTGCGGGATGC
CCACGCCAGGAAATTGCCTCACTTGTCCAGCTACATGTTGAAAACAGTTT
TGCTTCATCGCCTCGAAAGTGCTGACTGGGAAAGAGACCTGGGCACCCTA
TTGGTTGAGATGTGGAGTCATTTGGTGGATCATCTACGCGCTCGTAGACT
GGAGTTCTTTTTGGCTAAGGATCATAATGTATTCAATCGTATGAATCAAA
ATGAAATCAAGATATGTCTAGAAAACGCAAGCACTCTGCTAAGAAAGCTT
TGTATTGCTCAGACATGCGGTGGTAGCTACCATCATGTGGCCCAACTATT
CAATATTCCAAATTAAGAAGAATTTAATTTCAAAACAATACCGAGCCTTT
TTCATGCCATTTGCAGAAAGGAAAAAGCGTACATGCACACATTTGGCTCA
TTCACAAGGGCGCAGAACAAATATTCGATTATATCCGAGGCTGAATAAGC
ACATATCTTGCTGAGTAACAGAACTTTAGTGGAAGAAAAAAGAAGTTGAA
TCAAAAGTCATTTCGGCCGCACATTTGATTGTTTACATTGTCCCTGAACT
TTGTTTAAAAATAAAGCTACGAAAAAAAAAAAAAAAAAAA

IP12463.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:49:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG7194-RA 1365 CG7194-RA 45..1365 1..1321 6605 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:38:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 8294367..8295495 1321..193 5600 99.7 Minus
chr3L 24539361 chr3L 8295832..8296026 195..1 960 99.5 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:15:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:38:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8302356..8303492 1329..193 5685 100 Minus
3L 28110227 3L 8303821..8304015 195..1 975 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:08:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 8295456..8296592 1329..193 5685 100 Minus
3L 28103327 3L 8296921..8297115 195..1 975 100 Minus
Blast to na_te.dros performed on 2019-03-15 23:38:51 has no hits.

IP12463.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:39:28 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 8294367..8295493 195..1321 99 <- Minus
chr3L 8295833..8296026 1..194 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:52:42 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
CG7194-RA 1..1041 26..1066 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:44:06 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
CG7194-RA 1..1041 26..1066 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:52:00 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
CG7194-RA 1..1041 26..1066 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:24:49 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
CG7194-RA 1..1041 26..1066 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:44:12 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
CG7194-RA 1..1041 26..1066 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:52:02 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
CG7194-RA 45..1365 1..1321 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:44:06 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
CG7194-RA 45..1365 1..1321 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:52:00 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
CG7194-RA 45..1365 1..1321 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:24:49 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
CG7194-RA 21..1341 1..1321 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:44:12 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
CG7194-RA 45..1365 1..1321 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:39:28 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8302364..8303490 195..1321 100 <- Minus
3L 8303822..8304015 1..194 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:39:28 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8302364..8303490 195..1321 100 <- Minus
3L 8303822..8304015 1..194 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:39:28 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8302364..8303490 195..1321 100 <- Minus
3L 8303822..8304015 1..194 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:52:00 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8295464..8296590 195..1321 100 <- Minus
arm_3L 8296922..8297115 1..194 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:57:54 Download gff for IP12463.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8295464..8296590 195..1321 100 <- Minus
3L 8296922..8297115 1..194 100   Minus

IP12463.hyp Sequence

Translation from 0 to 1065

> IP12463.hyp
STLGFCEKMSTANHFQRILEKLSISDNERAVYTKEAEEIQNYVVDELKRV
DKTFRQVFDGLSLGGSYLDRVKLNLPDEFDLHMKLKFPFDIRPTRIDQGF
IYLEADLTVINPQRIHRIVLQDWLRNAFRKVFRSNQTIATTSNRVYKLTY
TLEGYGCAHTILAVCGSRSISFDLVPAFEFSGSQWPFDICPVPADVSNNW
PWFAIPQQKKKSAKPRTTFMVCAPHWEREIMKGKDNLKNVLRLMKGLRDA
HARKLPHLSSYMLKTVLLHRLESADWERDLGTLLVEMWSHLVDHLRARRL
EFFLAKDHNVFNRMNQNEIKICLENASTLLRKLCIAQTCGGSYHHVAQLF
NIPN*

IP12463.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:47:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG7194-PA 346 CG7194-PA 1..346 9..354 1835 100 Plus
CG12970-PC 378 CG12970-PC 23..336 29..318 191 26.7 Plus

IP12463.pep Sequence

Translation from 25 to 1065

> IP12463.pep
MSTANHFQRILEKLSISDNERAVYTKEAEEIQNYVVDELKRVDKTFRQVF
DGLSLGGSYLDRVKLNLPDEFDLHMKLKFPFDIRPTRIDQGFIYLEADLT
VINPQRIHRIVLQDWLRNAFRKVFRSNQTIATTSNRVYKLTYTLEGYGCA
HTILAVCGSRSISFDLVPAFEFSGSQWPFDICPVPADVSNNWPWFAIPQQ
KKKSAKPRTTFMVCAPHWEREIMKGKDNLKNVLRLMKGLRDAHARKLPHL
SSYMLKTVLLHRLESADWERDLGTLLVEMWSHLVDHLRARRLEFFLAKDH
NVFNRMNQNEIKICLENASTLLRKLCIAQTCGGSYHHVAQLFNIPN*

IP12463.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:33:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23564-PA 373 GF23564-PA 1..334 1..344 989 56.7 Plus
Dana\GF11501-PA 543 GF11501-PA 20..337 18..310 232 26.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:33:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15096-PA 344 GG15096-PA 1..341 1..345 1388 75.9 Plus
Dere\GG15095-PA 344 GG15095-PA 1..341 1..345 1388 75.9 Plus
Dere\GG20550-PA 445 GG20550-PA 17..320 14..295 206 27.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:33:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15966-PA 362 GH15966-PA 18..342 11..325 381 30.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG7194-PA 346 CG7194-PA 1..346 1..346 1835 100 Plus
CG12970-PC 378 CG12970-PC 23..336 21..310 191 26.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:33:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13277-PA 302 GI13277-PA 1..291 1..284 732 50.5 Plus
Dmoj\GI20448-PA 473 GI20448-PA 19..323 18..295 217 28.1 Plus
Dmoj\GI22722-PA 387 GI22722-PA 7..358 6..330 197 25.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:33:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13280-PA 351 GL13280-PA 1..349 1..344 922 51 Plus
Dper\GL22662-PA 344 GL22662-PA 1..344 1..344 885 50.7 Plus
Dper\GL26590-PA 285 GL26590-PA 42..270 107..331 363 38 Plus
Dper\GL10891-PA 382 GL10891-PA 18..366 6..329 226 26.8 Plus
Dper\GL11768-PA 532 GL11768-PA 206..469 58..295 212 29.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20172-PA 351 GA20172-PA 1..349 1..344 914 50.1 Plus
Dpse\GA23373-PA 344 GA23373-PA 1..344 1..344 876 50.7 Plus
Dpse\GA23679-PA 285 GA23679-PA 42..270 107..331 365 37.6 Plus
Dpse\GA30264-PA 385 GA30264-PA 20..322 18..295 265 29.4 Plus
Dpse\GA15837-PA 382 GA15837-PA 18..366 6..329 214 26.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:33:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13003-PA 343 GD13003-PA 1..343 1..346 1637 86.7 Plus
Dsim\GD24904-PA 383 GD24904-PA 23..338 14..322 172 25.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:33:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21980-PA 344 GJ21980-PA 30..330 31..337 167 24.2 Plus
Dvir\GJ23449-PA 317 GJ23449-PA 7..285 6..265 165 24.9 Plus
Dvir\GJ20118-PA 387 GJ20118-PA 19..338 18..310 153 23.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:33:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23874-PA 227 GK23874-PA 46..222 107..279 306 37.9 Plus
Dwil\GK20853-PA 567 GK20853-PA 61..321 57..295 178 26.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:33:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21318-PA 345 GE21318-PA 1..345 1..346 1434 78 Plus
Dyak\GE20848-PA 344 GE20848-PA 1..344 1..344 944 55.8 Plus
Dyak\GE11736-PA 520 GE11736-PA 17..322 14..295 230 28.9 Plus
Dyak\GE11395-PA 413 GE11395-PA 21..362 14..325 179 26.8 Plus