Clone IP12509 Report

Search the DGRC for IP12509

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:125
Well:9
Vector:pOT2
Associated Gene/TranscriptCG31907-RA
Protein status:IP12509.pep: gold
Preliminary Size:1536
Sequenced Size:1495

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31907 2005-01-01 Successful iPCR screen
CG31907 2008-04-29 Release 5.5 accounting
CG31907 2008-08-15 Release 5.9 accounting
CG31907 2008-12-18 5.12 accounting

Clone Sequence Records

IP12509.complete Sequence

1495 bp (1495 high quality bases) assembled on 2005-03-28

GenBank Submission: BT022894

> IP12509.complete
CCTCAGTCAACACAGAATCGACCTGTACTCCTTACCCAAGTTAATATAAC
TGGAGTCAACAGACTTACATAAAGTACCATGGCACTTTCCGCAACGAAGG
ACACTAGTCCATGGACCAACATGGTGAAGAGGGTAACAGCGAGCAAATAC
GATGTAGTCTCGGTCAAGACGCTGCTGATGTTTATCAACAGCAAACTGGA
TTGCGAATTGCGAGGCTTTGAGGATCTGAAAACAGGAGCAGTATATTGCC
AACTGATGCACAGACTCTTTCCCAATTCGATACAAATTCATAAGGTCAAG
TTTTATACGAACGACATCAGCGACTTTCAGTTAAATTTCCGGTTACTAAA
CAATTGCTTTCAAAAACTAAGAGTAACCGTTTATATGCCAGTGCATGAGT
TAACTCTGGGACACAATCAAGTGGTCTTCTGCAATTGGATATACAAGTTC
TATGAAGCAAACGACAAGGGGAACGAATACGATGCCAGAAAGGTGAGAAA
AGGCTCGCCAATCGGTTTAGACAATAGTTATAAGGTAGCCTCCATCTCAA
CTGGCAGCACCTGTTCAGTGCATAAATGCCAGTCGATGGTCTTTAATTAT
GCAAAAAAGCCCGTCCGATTCGAGAGGCAAAACAGCCTCGATGCTCTATC
ATTCAGACCGGGCATCTTTAAGAGTATTCGTAGGGAGAAGCCAACCGAAC
AGGCGAATCCAGAACCACAGCAGACAAAGAATATCAAAAAGTCCTCACAA
TTCCTTGCCGAGAGCAAGCACGTTTCTCTGCCATCGGATAGCGAAGATGA
GTTGGAACTTAAAGCCCAAAAACGTTATTTGCAAGATCAGTTTGTGAAAA
AGCTCAATAGCAGTAAGAATGATGAGAAGACTGGCACAGACGCAACGTCA
AAAATCTCGGAAATTCCAAGACCAAATCCAGAAAACGAGCAACTAAACAC
TGTATGCGAAAAGTATGAGCAGGAAACGAGTGATCTGCGATCCAATCTTA
ATTTGATCGACAAACTAGAATTACAGCTACAAAACTTACAGATTGATAAG
GAAAAGCTGACCAACAAGTTGTCACGCGTGGAGTCAATATTAAACAAACA
CGATTTAAATCCAGAAAAAGCTGTTCTAAAATTAAGAAAATTGCTATTGA
ACCAAGCACAAACGGCAAGAGTGCATCCGCGTAAAGCGGATACACTTATT
GATGAAGATGAATTAACCAAGAAAGAAGAATTCAAGTCTTGCACGGAATT
TTCTCGTCAGGAAGACGTTAAGTTGACGCCAACTCAAATAAAAAATCAAA
AATCAAATACTAGGTGTTCGCAAACTAAGGTCAGAAAGAGCCTAAAGGTT
TGATGCAAATGTTGCGTCCAATTTAGAATCCACGGAATATACAAACTACG
TGAATGTAGGCATCTAAAGAAGAATTACTCCATCGGATACGATTTTGATT
TTCATACATAACACCTTATGAAAAAAAAAAAAAAAAAAAAAAAAA

IP12509.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:39:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG31907-RA 1500 CG31907-RA 31..1500 1..1470 7350 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:19:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 7058372..7059822 1470..20 7180 99.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:15:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:19:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7059309..7060768 1479..20 7300 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:29:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7059309..7060768 1479..20 7300 100 Minus
Blast to na_te.dros performed on 2019-03-16 02:19:16 has no hits.

IP12509.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:20:01 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 7058372..7059821 21..1470 99 <- Minus
chr2L 7059886..7059905 1..20 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:52:54 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
CG31907-RA 1..1275 79..1353 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:06:06 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
CG31907-RA 1..1275 79..1353 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:02:53 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
CG31907-RA 1..1275 79..1353 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:51:05 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
CG31907-RA 1..1275 79..1353 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:05:31 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
CG31907-RA 1..1275 79..1353 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:54:46 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
CG31907-RA 1..1470 1..1470 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:06:05 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
CG31907-RA 1..1470 1..1470 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:02:53 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
CG31907-RA 1..1470 1..1470 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:51:05 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
CG31907-RA 3..1453 20..1470 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:05:31 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
CG31907-RA 1..1470 1..1470 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:20:01 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7059318..7060767 21..1470 100 <- Minus
2L 7060832..7060851 1..20 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:20:01 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7059318..7060767 21..1470 100 <- Minus
2L 7060832..7060851 1..20 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:20:01 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7059318..7060767 21..1470 100 <- Minus
2L 7060832..7060851 1..20 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:02:53 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7059318..7060767 21..1470 100 <- Minus
arm_2L 7060832..7060851 1..20 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:25:53 Download gff for IP12509.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7059318..7060767 21..1470 100 <- Minus
2L 7060832..7060851 1..20 100   Minus

IP12509.hyp Sequence

Translation from 78 to 1352

> IP12509.hyp
MALSATKDTSPWTNMVKRVTASKYDVVSVKTLLMFINSKLDCELRGFEDL
KTGAVYCQLMHRLFPNSIQIHKVKFYTNDISDFQLNFRLLNNCFQKLRVT
VYMPVHELTLGHNQVVFCNWIYKFYEANDKGNEYDARKVRKGSPIGLDNS
YKVASISTGSTCSVHKCQSMVFNYAKKPVRFERQNSLDALSFRPGIFKSI
RREKPTEQANPEPQQTKNIKKSSQFLAESKHVSLPSDSEDELELKAQKRY
LQDQFVKKLNSSKNDEKTGTDATSKISEIPRPNPENEQLNTVCEKYEQET
SDLRSNLNLIDKLELQLQNLQIDKEKLTNKLSRVESILNKHDLNPEKAVL
KLRKLLLNQAQTARVHPRKADTLIDEDELTKKEEFKSCTEFSRQEDVKLT
PTQIKNQKSNTRCSQTKVRKSLKV*

IP12509.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:48:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG31907-PB 424 CG31907-PB 1..424 1..424 2185 100 Plus
CG31907-PA 424 CG31907-PA 1..424 1..424 2185 100 Plus
Eb1-PE 290 CG3265-PE 20..205 32..222 236 31.1 Plus
Eb1-PG 291 CG3265-PG 20..206 32..222 236 32.1 Plus
Eb1-PA 291 CG3265-PA 20..206 32..222 236 32.1 Plus

IP12509.pep Sequence

Translation from 78 to 1352

> IP12509.pep
MALSATKDTSPWTNMVKRVTASKYDVVSVKTLLMFINSKLDCELRGFEDL
KTGAVYCQLMHRLFPNSIQIHKVKFYTNDISDFQLNFRLLNNCFQKLRVT
VYMPVHELTLGHNQVVFCNWIYKFYEANDKGNEYDARKVRKGSPIGLDNS
YKVASISTGSTCSVHKCQSMVFNYAKKPVRFERQNSLDALSFRPGIFKSI
RREKPTEQANPEPQQTKNIKKSSQFLAESKHVSLPSDSEDELELKAQKRY
LQDQFVKKLNSSKNDEKTGTDATSKISEIPRPNPENEQLNTVCEKYEQET
SDLRSNLNLIDKLELQLQNLQIDKEKLTNKLSRVESILNKHDLNPEKAVL
KLRKLLLNQAQTARVHPRKADTLIDEDELTKKEEFKSCTEFSRQEDVKLT
PTQIKNQKSNTRCSQTKVRKSLKV*

IP12509.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:32:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23323-PA 338 GF23323-PA 26..147 32..151 228 36.1 Plus
Dana\GF11070-PA 434 GF11070-PA 30..140 27..135 210 39.6 Plus
Dana\GF13745-PA 240 GF13745-PA 10..126 19..133 148 26.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:32:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23222-PA 393 GG23222-PA 20..132 32..142 211 38.9 Plus
Dere\GG18930-PA 625 GG18930-PA 24..155 32..158 193 34.1 Plus
Dere\GG18890-PA 209 GG18890-PA 23..133 35..146 158 29.7 Plus
Dere\GG20937-PA 248 GG20937-PA 10..126 19..133 150 28.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:32:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21755-PA 377 GH21755-PA 15..150 27..161 216 36.5 Plus
Dgri\GH12721-PA 149 GH12721-PA 26..145 32..147 190 40 Plus
Dgri\GH11211-PA 145 GH11211-PA 22..121 31..128 172 39 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG31907-PB 424 CG31907-PB 1..424 1..424 2185 100 Plus
CG31907-PA 424 CG31907-PA 1..424 1..424 2185 100 Plus
Eb1-PE 290 CG3265-PE 20..205 32..222 236 31.1 Plus
Eb1-PG 291 CG3265-PG 20..206 32..222 236 32.1 Plus
Eb1-PA 291 CG3265-PA 20..206 32..222 236 32.1 Plus
Eb1-PD 291 CG3265-PD 20..206 32..222 236 32.1 Plus
Eb1-PB 291 CG3265-PB 20..206 32..222 236 32.1 Plus
CG32371-PA 294 CG32371-PA 27..242 32..243 231 32.8 Plus
Eb1-PF 297 CG3265-PF 20..141 32..151 214 38.5 Plus
CG15306-PB 357 CG15306-PB 3..147 13..150 195 34.5 Plus
CG15306-PA 357 CG15306-PA 3..147 13..150 195 34.5 Plus
CG18190-PB 248 CG18190-PB 10..126 19..133 151 28.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:32:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16216-PA 854 GI16216-PA 12..143 16..147 262 34.1 Plus
Dmoj\GI16249-PA 266 GI16249-PA 20..166 32..172 245 37.4 Plus
Dmoj\GI19301-PA 423 GI19301-PA 15..142 27..160 218 38.2 Plus
Dmoj\GI15398-PA 493 GI15398-PA 25..153 32..160 203 36.1 Plus
Dmoj\GI14128-PA 207 GI14128-PA 21..123 28..128 162 36.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:32:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11119-PA 414 GL11119-PA 20..157 32..165 229 38.4 Plus
Dper\GL24349-PA 199 GL24349-PA 16..119 27..128 158 33.7 Plus
Dper\GL10583-PA 257 GL10583-PA 10..126 19..133 148 27.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:32:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17043-PA 381 GA17043-PA 20..157 32..165 231 38.4 Plus
Dpse\GA26582-PA 229 GA26582-PA 16..119 27..128 161 33.7 Plus
Dpse\GA14834-PA 257 GA14834-PA 10..126 19..133 148 27.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:32:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13642-PA 418 GM13642-PA 1..393 1..395 1405 73.6 Plus
Dsec\GM20898-PA 393 GM20898-PA 20..132 32..142 217 39.8 Plus
Dsec\GM19864-PA 246 GM19864-PA 10..126 19..133 152 28.2 Plus
Dsec\GM11276-PA 183 GM11276-PA 3..92 20..109 146 30 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:32:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22515-PA 415 GD22515-PA 1..390 1..395 1393 73.5 Plus
Dsim\GD10423-PA 393 GD10423-PA 20..132 32..142 217 39.8 Plus
Dsim\GD25351-PA 248 GD25351-PA 10..126 19..133 153 28.2 Plus
Dsim\GD24542-PA 183 GD24542-PA 18..92 35..109 148 34.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:32:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15907-PA 1080 GJ15907-PA 13..214 16..223 341 37.2 Plus
Dvir\GJ16253-PA 189 GJ16253-PA 6..144 16..153 276 39.6 Plus
Dvir\GJ22178-PA 384 GJ22178-PA 15..151 27..161 232 36.5 Plus
Dvir\GJ16714-PA 257 GJ16714-PA 15..124 35..142 223 41.8 Plus
Dvir\GJ14795-PA 431 GJ14795-PA 33..174 32..166 207 33.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:32:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18120-PA 260 GK18120-PA 12..148 25..159 209 32.8 Plus
Dwil\GK22141-PA 373 GK22141-PA 15..136 27..146 209 37.7 Plus
Dwil\GK12829-PA 267 GK12829-PA 8..132 20..145 199 35.2 Plus
Dwil\GK24903-PA 479 GK24903-PA 6..133 16..141 189 37.4 Plus
Dwil\GK16192-PA 244 GK16192-PA 11..156 30..168 170 32.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:32:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18379-PA 435 GE18379-PA 1..381 1..392 966 52.9 Plus
Dyak\GE19075-PA 385 GE19075-PA 15..132 27..142 215 39 Plus
Dyak\GE15400-PA 495 GE15400-PA 30..160 32..157 188 33.6 Plus
Dyak\GE18273-PA 546 GE18273-PA 1..116 16..128 161 33.6 Plus
Dyak\GE13874-PA 249 GE13874-PA 10..126 19..133 149 27.4 Plus