Clone IP12582 Report

Search the DGRC for IP12582

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:125
Well:82
Vector:pOT2
Associated Gene/Transcriptmsta-RA
Protein status:IP12582.pep: gold
Preliminary Size:1497
Sequenced Size:1675

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
msta 2008-04-29 Picked prior to 5.5
CG9642 2008-05-05 Release 5.5 accounting
msta 2008-12-18 5.12 accounting

Clone Sequence Records

IP12582.complete Sequence

1675 bp assembled on 2008-08-28

GenBank Submission: BT044457.1

> IP12582.complete
CGTAGTCCGCCCAGCTGCGCGGAGACATCTTCACTCGCCGAGTTGCCGCG
CGTCGCGTTGGTTCGCCGCAGTTCCGACCGACCTCCCACCGCAGTCGCCA
TGTCTACTGCTGCCCAGTGCCCGCCTCCTCGCCCAGGCGGTGGTGGAGGA
GACACCACACTGGCCGCCCTGAGCGCTCACATGGCCCCTTGTCGCGACAC
CACGCCCGAGCAGCTGGCGCAGCTGATAGACGTCCACTTGGGGGATCTGC
GCCAAGAGCAGCCCAACTGGACCATCAGCTCCTCCACGGTGGCAGGTCGT
GGGGTGTTTGCCACCCGAGACATAGCCGCCGGCGAGCTGATCTTCCAGGA
GCGAGCCCTAGTCACCGGTCCGACGGCGAGAAAGGGCCAACTGAGCAGCT
GCATCTGCTGTCATGAGACCCTGCCGCAAACGGGATTCCTTTGCCGGCAT
CGCTGCACCCTGCCCGTATGCGAAACCTGTTCGGATTCCGAGGAGCACCA
GGCGGAGTGCGAGCACTTCCGTCGCTGGCAGCCCAAAGACGTGGATGCGG
AGCAGGAGCAGGTGAATCCTATGTCGCTGAGGATCCTCACCGCAGTGAGG
GTCTTCCACTTGGGCAAGGAACAGCGGCATCTGGTGGACGCCATGCAAGC
GAATGCGGAGCGCGCTTACCGGCGGGAGATCATCCAGGCGGCCCAATGCT
TCCGGAACTTCCCCACCACGGATCGGGTGTTCATGGACCAGCTGTTCCGG
ATCGTGGGCGTGCTCAATACAAATGCCTTCGAGGCTCCTTGCCGCTCTGG
CGGCCACGAGACGCTACTGCGGGGTCTGTTCCCGCTCACGGCGATCATGA
ACCACGAGTGCACCCCGAACGCTAGTCACTACTTCGAAAACGGTCGACTG
GCGGTGGTTCGGGCTGCGCGCGATATTCCCAAGGGCGGTGAGATTACCAC
GACCTACACCAAGATCCTCTGGGGCAACCTCACCCGGAATATCTTCCTCA
AGATGACCAAGCACTTTGCCTGCGACTGCGTGAGGTGTCACGACAATACT
GAAAACGGCACCTACTTGTCGGCGCTTTTCTGCCGGGAACAGGGCTGCCG
TGGCCTGGTGATTCCCGTCCAGACTCGGACACTGCAGCCGGACTGGCGGT
GCATCACTTGCGAGAACGTGTTCCCGCACGCAAAGATGGCCAAGTACCAG
GACTTCGCGCTGAACACCATCAATAACCGTATCAACTCGTGCAGTGTCCA
GGACATGATCCACTTCATCAACGAGCTGTGTCCGCGCTTCTGTCCCTCCT
CGAACTACGTGCTGATCGAGGCCAAGCTGAATGTGATCTGGAGGATGACG
CGGTTCGACCACGAGGAGTACACTCCGGAGGAGATGGGCCACATGGATCG
CTACCGCGAGGAAGTGTTGGCCATCCTCCACAAGCTGGGAGCCGGAGAGT
GTACCCTAAAGAAGCTGATCACCGGGGAGATTCAGTGATTCATATTTAGC
TTCAAAACTTCATTTTTTTTTTTTTAGGTGTGAATGAGTGAGTGCTTTTG
TGAATGCGTACTTTTCGGGGTGGCGTGAATCGCATCCGAGCCCTTTGTTG
CTATTTTATTCGTAGTCACTTAAGAATCCAATAAACACCGAATCCTTTCG
AACTAAAAAAAAAAAAAAAAAAAAA

IP12582.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:08:48
Subject Length Description Subject Range Query Range Score Percent Strand
msta-RA 2167 msta-RA 199..1853 1..1655 8275 100 Plus
msta-RB 2051 msta-RB 1133..1737 1051..1655 3025 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:54:28
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 2101473..2102523 1051..1 5255 100 Minus
chrX 22417052 chrX 2099800..2100403 1654..1051 3005 99.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:16:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:54:26
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2207533..2208583 1051..1 5255 100 Minus
X 23542271 X 2205859..2206463 1655..1051 3025 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:26:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 2215631..2216681 1051..1 5255 100 Minus
X 23527363 X 2213957..2214561 1655..1051 3025 100 Minus
Blast to na_te.dros performed on 2019-03-16 06:54:26 has no hits.

IP12582.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:55:10 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 2099800..2100403 1051..1654 99 <- Minus
chrX 2101474..2102523 1..1050 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:53:04 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
msta-RA 1..1389 100..1488 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:12:51 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
msta-RA 1..1389 100..1488 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:34:17 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
msta-RA 1..1389 100..1488 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:22:42 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
msta-RA 1..1389 100..1488 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:50:37 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
msta-RA 96..1749 1..1654 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:12:51 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
msta-RA 96..1749 1..1654 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:34:17 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
msta-RA 96..1749 1..1654 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-28 18:08:49 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
msta-RA 96..1749 1..1654 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:22:42 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
msta-RA 96..1749 1..1654 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:55:10 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
X 2205860..2206463 1051..1654 100 <- Minus
X 2207534..2208583 1..1050 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:55:10 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
X 2205860..2206463 1051..1654 100 <- Minus
X 2207534..2208583 1..1050 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:55:10 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
X 2205860..2206463 1051..1654 100 <- Minus
X 2207534..2208583 1..1050 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:34:17 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2099893..2100496 1051..1654 100 <- Minus
arm_X 2101567..2102616 1..1050 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:43:23 Download gff for IP12582.complete
Subject Subject Range Query Range Percent Splice Strand
X 2213958..2214561 1051..1654 100 <- Minus
X 2215632..2216681 1..1050 100   Minus

IP12582.hyp Sequence

Translation from 0 to 1487

> IP12582.hyp
RSPPSCAETSSLAELPRVALVRRSSDRPPTAVAMSTAAQCPPPRPGGGGG
DTTLAALSAHMAPCRDTTPEQLAQLIDVHLGDLRQEQPNWTISSSTVAGR
GVFATRDIAAGELIFQERALVTGPTARKGQLSSCICCHETLPQTGFLCRH
RCTLPVCETCSDSEEHQAECEHFRRWQPKDVDAEQEQVNPMSLRILTAVR
VFHLGKEQRHLVDAMQANAERAYRREIIQAAQCFRNFPTTDRVFMDQLFR
IVGVLNTNAFEAPCRSGGHETLLRGLFPLTAIMNHECTPNASHYFENGRL
AVVRAARDIPKGGEITTTYTKILWGNLTRNIFLKMTKHFACDCVRCHDNT
ENGTYLSALFCREQGCRGLVIPVQTRTLQPDWRCITCENVFPHAKMAKYQ
DFALNTINNRINSCSVQDMIHFINELCPRFCPSSNYVLIEAKLNVIWRMT
RFDHEEYTPEEMGHMDRYREEVLAILHKLGAGECTLKKLITGEIQ*

IP12582.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:49:01
Subject Length Description Subject Range Query Range Score Percent Strand
msta-PD 462 CG33548-PD 1..462 34..495 2499 100 Plus
msta-PA 462 CG33548-PA 1..462 34..495 2499 100 Plus
msta-PB 448 CG33548-PB 24..448 70..495 1537 66 Plus
CG12119-PB 500 CG12119-PB 4..421 69..487 891 40.7 Plus
CG12119-PA 500 CG12119-PA 4..421 69..487 891 40.7 Plus

IP12582.pep Sequence

Translation from 0 to 1487

> IP12582.pep
RSPPSCAETSSLAELPRVALVRRSSDRPPTAVAMSTAAQCPPPRPGGGGG
DTTLAALSAHMAPCRDTTPEQLAQLIDVHLGDLRQEQPNWTISSSTVAGR
GVFATRDIAAGELIFQERALVTGPTARKGQLSSCICCHETLPQTGFLCRH
RCTLPVCETCSDSEEHQAECEHFRRWQPKDVDAEQEQVNPMSLRILTAVR
VFHLGKEQRHLVDAMQANAERAYRREIIQAAQCFRNFPTTDRVFMDQLFR
IVGVLNTNAFEAPCRSGGHETLLRGLFPLTAIMNHECTPNASHYFENGRL
AVVRAARDIPKGGEITTTYTKILWGNLTRNIFLKMTKHFACDCVRCHDNT
ENGTYLSALFCREQGCRGLVIPVQTRTLQPDWRCITCENVFPHAKMAKYQ
DFALNTINNRINSCSVQDMIHFINELCPRFCPSSNYVLIEAKLNVIWRMT
RFDHEEYTPEEMGHMDRYREEVLAILHKLGAGECTLKKLITGEIQ*

IP12582.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:02:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21975-PA 445 GF21975-PA 3..445 53..495 2127 87.1 Plus
Dana\GF19100-PA 499 GF19100-PA 4..421 69..487 891 40.6 Plus
Dana\GF21974-PA 364 GF21974-PA 29..308 70..350 742 49.5 Plus
Dana\GF13486-PA 517 GF13486-PA 9..439 64..483 312 24.3 Plus
Dana\GF20287-PA 528 GF20287-PA 45..463 90..494 303 25.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:02:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12639-PA 462 GG12639-PA 1..462 34..495 2460 98.1 Plus
Dere\GG18992-PA 503 GG18992-PA 4..421 69..487 896 40.2 Plus
Dere\GG12637-PA 309 GG12637-PA 24..303 70..350 736 48.1 Plus
Dere\GG13432-PA 530 GG13432-PA 43..358 84..387 308 29.5 Plus
Dere\GG10833-PA 553 GG10833-PA 55..402 99..423 301 27.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:02:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12314-PA 611 GH12314-PA 287..611 171..495 1472 82.2 Plus
Dgri\GH17754-PA 499 GH17754-PA 4..421 69..487 898 40.4 Plus
Dgri\GH12314-PA 611 GH12314-PA 19..300 70..350 717 49.1 Plus
Dgri\GH16955-PA 529 GH16955-PA 47..373 90..405 312 30.6 Plus
Dgri\GH19808-PA 515 GH19808-PA 43..395 90..443 286 24.5 Plus
Dgri\GH20950-PA 557 GH20950-PA 56..393 99..411 285 26.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:21:14
Subject Length Description Subject Range Query Range Score Percent Strand
SmydA-8-PD 462 CG33548-PD 1..462 34..495 2499 100 Plus
SmydA-8-PA 462 CG33548-PA 1..462 34..495 2499 100 Plus
SmydA-8-PB 448 CG33548-PB 24..448 70..495 1537 66 Plus
SmydA-9-PB 500 CG12119-PB 4..421 69..487 891 40.7 Plus
SmydA-9-PA 500 CG12119-PA 4..421 69..487 891 40.7 Plus
SmydA-8-PC 158 CG33548-PC 13..158 350..495 791 99.3 Plus
SmydA-5-PA 553 CG14590-PA 55..402 99..423 337 28.4 Plus
SmydA-2-PA 530 CG18136-PA 43..358 84..387 317 28.9 Plus
SmydA-1-PA 513 CG8503-PA 7..342 64..387 297 25.4 Plus
SmydA-4-PA 532 CG11160-PA 49..467 90..494 290 25.7 Plus
SmydA-3-PC 503 CG43129-PC 6..315 92..387 286 30.5 Plus
SmydA-4-PB 403 CG11160-PB 49..399 90..431 260 26.1 Plus
SmydA-3-PE 507 CG43129-PE 17..319 95..387 259 29.3 Plus
SmydA-3-PD 507 CG17086-PA 17..319 95..387 259 29.3 Plus
SmydA-4-PC 369 CG11160-PC 14..304 207..494 230 27.2 Plus
SmydA-7-PB 488 CG9640-PB 17..363 99..445 222 23.9 Plus
SmydA-7-PA 488 CG9640-PA 17..363 99..445 222 23.9 Plus
SmydA-6-PA 498 CG9642-PA 14..308 92..385 215 24.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:02:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21459-PA 460 GI21459-PA 7..460 53..495 1975 80.2 Plus
Dmoj\GI15088-PA 492 GI15088-PA 4..421 69..487 898 40.9 Plus
Dmoj\GI21458-PA 302 GI21458-PA 22..301 70..350 727 49.1 Plus
Dmoj\GI11814-PA 527 GI11814-PA 47..361 90..392 325 30.3 Plus
Dmoj\GI16059-PA 526 GI16059-PA 35..459 88..494 314 25.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:02:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13396-PA 787 GL13396-PA 345..787 53..495 2108 85.6 Plus
Dper\GL26796-PA 498 GL26796-PA 4..421 69..487 881 40 Plus
Dper\GL13396-PA 787 GL13396-PA 34..312 71..350 702 48.2 Plus
Dper\GL10122-PA 515 GL10122-PA 43..344 90..389 289 26.4 Plus
Dper\GL11805-PA 528 GL11805-PA 31..368 97..411 286 28.7 Plus
Dper\GL21959-PA 532 GL21959-PA 48..392 90..423 285 27.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:02:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22855-PA 844 GA22855-PA 402..844 53..495 2106 85.6 Plus
Dpse\GA11413-PA 496 GA11413-PA 4..421 69..487 879 40 Plus
Dpse\GA22855-PA 844 GA22855-PA 34..312 71..350 701 48.2 Plus
Dpse\GA25085-PA 515 GA25085-PA 43..344 90..389 289 26.4 Plus
Dpse\GA14810-PA 532 GA14810-PA 48..392 90..423 285 27 Plus
Dpse\GA13100-PA 549 GA13100-PA 52..389 97..411 285 29 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:02:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18906-PA 302 GM18906-PA 1..282 191..472 1526 98.9 Plus
Dsec\GM11659-PA 496 GM11659-PA 4..421 69..487 879 39.5 Plus
Dsec\GM14901-PA 530 GM14901-PA 43..358 84..387 313 29.3 Plus
Dsec\GM21522-PA 514 GM21522-PA 32..342 82..387 287 26.9 Plus
Dsec\GM16483-PA 486 GM16483-PA 33..315 99..361 266 30.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:02:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16076-PA 497 GD16076-PA 4..421 69..487 902 40.5 Plus
Dsim\GD12310-PA 530 GD12310-PA 43..358 84..387 314 29 Plus
Dsim\GD10336-PA 531 GD10336-PA 33..380 99..423 311 28.7 Plus
Dsim\GD16997-PA 532 GD16997-PA 49..467 90..494 285 25.9 Plus
Dsim\GD23739-PA 325 GD23739-PA 1..137 249..387 215 39.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:02:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16480-PA 600 GJ16480-PA 275..600 171..495 1472 83.1 Plus
Dvir\GJ18896-PA 506 GJ18896-PA 4..421 69..487 905 40.2 Plus
Dvir\GJ16480-PA 600 GJ16480-PA 8..289 70..351 733 48.8 Plus
Dvir\GJ13517-PA 528 GJ13517-PA 41..369 84..401 319 29.8 Plus
Dvir\GJ20068-PA 515 GJ20068-PA 43..437 90..483 299 25 Plus
Dvir\GJ15632-PA 527 GJ15632-PA 41..462 88..494 292 25.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:02:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16970-PA 766 GK16970-PA 317..766 53..495 2010 82 Plus
Dwil\GK25543-PA 503 GK25543-PA 4..429 69..495 883 39.7 Plus
Dwil\GK16970-PA 766 GK16970-PA 13..297 66..350 734 48.5 Plus
Dwil\GK23578-PA 128 GK23578-PA 2..126 225..350 366 52.4 Plus
Dwil\GK20779-PA 515 GK20779-PA 32..407 82..455 321 26 Plus
Dwil\GK12548-PA 534 GK12548-PA 48..366 90..395 309 29.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:02:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15465-PA 497 GE15465-PA 4..421 69..487 897 40.5 Plus
Dyak\GE10999-PA 150 GE10999-PA 6..150 351..495 790 98.6 Plus
Dyak\GE16967-PA 306 GE16967-PA 25..304 70..350 746 48.8 Plus
Dyak\GE22530-PA 530 GE22530-PA 43..454 84..482 302 27.2 Plus
Dyak\GE13567-PA 514 GE13567-PA 32..407 82..455 296 24.9 Plus