BDGP Sequence Production Resources |
Search the DGRC for IP12630
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 126 |
Well: | 30 |
Vector: | pOT2 |
Associated Gene/Transcript | comm3-RD |
Protein status: | IP12630.pep: gold |
Preliminary Size: | 1272 |
Sequenced Size: | 1539 |
Gene | Date | Evidence |
---|---|---|
CG33209 | 2005-01-01 | Successful iPCR screen |
comm3 | 2008-04-29 | Stopped prior to 5.5 |
1539 bp assembled on 2011-09-08
GenBank Submission: BT128880.1
> IP12630.complete TTTTCAGTCGCGCAATGAAGCTCCAGCATCGCGGCTGAGTTTAAGAAAGA AATATATACGAAAGCACATGTGCCGACTGTACTAAAACTAGTGACAAATA AATATTACAGAATATATATAATTCTGAAAGATGGCTGATTTACTAAAGGC TCTGAATATTACGGGCAACCTGCTGGCAGGCCTCGAAGATGCCGGCAATC TAACGATTGCAACTGCCACAACCACAACTTTAAGTGAAGGCCTTAATGGC AATGCAACGACCTTGGATGCCGCAGCATCCACCAGTAGTGGCGAAAAACT CGATCTTGGCGGCTTCGATCTGCCCGGCAACTACTCCATACTCATTAACA AACTGGAGCAGCTGGCCTTGGGCTTGGATTCGGCCTTGGGAAATTTCACC ATCGATCGCCAGGAGGTCGAGATCAATTTGAGCGGCGCAGCCACGGCCAA CGACGTTGCCGATGTAGCCGACGATCTCTTTGATGTCCTGCCAGCTGCTC GGGCACCTCCGCCGCATATAGCACACGGATCAAGGATATATACCGGCGAC GATGGCCAGGACTTTGCCCACGTGGTCAGCGATATCTGGATTGGAGTCAT CCTTACACTGCTCATCGTCTTTGTGATATTCTTCATATGCGCTTGCTTCG TTTACCACAAATTCCAGCAGTGGAAGAACTCATACCGTGCCAATCACAGT GATCCCACGATCGAGATCTGCCGCCGCTGTCCGCCGGACTACGAGGCGGA GTCCCTGCCCTCGTACACGATTGTTTCCGGACTGCCGACGTACGATGATG CACTGGAGGAGTTCCGCAAGGCGGGCATTATCCTCACACCCGCCATGGTG CCCATCATCAAGATCTTCGAGTGCAACGAGACCGGCAAGGAGCAGGCGGT GGGCTACAGCCTGGTGGAGACGAACATAGCGAGTGCGGATGCTGCCGCGG ATAATGTGTCGCTGGCCTCGACCACCTGCAATTGTGGCAACTCCTCGCCC ACCTCATCGCTGCCCAGTTACAGTGCCGCCACGGCGGCTGTGATGGCAGC GGCGGCTGCTGCTCCTCCCCAGGTGATCGAACTATCACCGGAACACCTGG CCTCGTTGTCCCAGAAGCGTCTCTCCCTGCAGATCTCATTCAATAACTCG GTGCGCCGGCAGTCGCCGCTCAGGAATCATCTGCTGAGATCCCGAGCGGT GGGAAATACCGCCGGTGTTGGTCCATCGGAGGCAGCCGGTCCTGCCATTC ACGGGTCGGGAGCTCACGGAGTCCATGGCGGCGGAGGTGCAACCATTCTG CCCGTTCTGCATCGCTCCTCCTCTACAATTTCACTGTCCAACGAACGCCA GTTGCTGGATCAACGCCTCAGGCATTTGCATCATCGCGGTTCCCTCTACT GAGAACCCATATAGAGCATTCAAACTGCCTGACTAATCCTTCCTAAAGGG TATTCCCTATGTTAATCATATGCCAAGAGTTGTTAGTTTTAAGACACAGA CATAATAAACATGCGTTGTTTTTGAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15603110..15603950 | 684..1524 | 99 | <- | Minus |
chr3L | 15621828..15622510 | 1..683 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RD | 1..1272 | 131..1402 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RD | 1..1272 | 131..1402 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RD | 1..1272 | 131..1402 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RD | 1..1522 | 1..1522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RD | 1..1522 | 1..1522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RD | 1..1522 | 1..1522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15613182..15614022 | 684..1524 | 100 | <- | Minus |
3L | 15631898..15632580 | 1..683 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15613182..15614022 | 684..1524 | 100 | <- | Minus |
3L | 15631898..15632580 | 1..683 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15613182..15614022 | 684..1524 | 100 | <- | Minus |
3L | 15631898..15632580 | 1..683 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15606282..15607122 | 684..1524 | 100 | <- | Minus |
arm_3L | 15624998..15625680 | 1..683 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15606282..15607122 | 684..1524 | 100 | <- | Minus |
3L | 15624998..15625680 | 1..683 | 100 | Minus |
Translation from 130 to 1401
> IP12630.hyp MADLLKALNITGNLLAGLEDAGNLTIATATTTTLSEGLNGNATTLDAAAS TSSGEKLDLGGFDLPGNYSILINKLEQLALGLDSALGNFTIDRQEVEINL SGAATANDVADVADDLFDVLPAARAPPPHIAHGSRIYTGDDGQDFAHVVS DIWIGVILTLLIVFVIFFICACFVYHKFQQWKNSYRANHSDPTIEICRRC PPDYEAESLPSYTIVSGLPTYDDALEEFRKAGIILTPAMVPIIKIFECNE TGKEQAVGYSLVETNIASADAAADNVSLASTTCNCGNSSPTSSLPSYSAA TAAVMAAAAAAPPQVIELSPEHLASLSQKRLSLQISFNNSVRRQSPLRNH LLRSRAVGNTAGVGPSEAAGPAIHGSGAHGVHGGGGATILPVLHRSSSTI SLSNERQLLDQRLRHLHHRGSLY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
comm3-PE | 423 | CG42334-PE | 1..423 | 1..423 | 2158 | 100 | Plus |
comm3-PD | 423 | CG42334-PD | 1..423 | 1..423 | 2158 | 100 | Plus |
comm3-PC | 378 | CG42334-PC | 141..378 | 186..423 | 1213 | 100 | Plus |
comm2-PA | 343 | CG7554-PA | 113..286 | 144..310 | 222 | 30.2 | Plus |
Translation from 130 to 1401
> IP12630.pep MADLLKALNITGNLLAGLEDAGNLTIATATTTTLSEGLNGNATTLDAAAS TSSGEKLDLGGFDLPGNYSILINKLEQLALGLDSALGNFTIDRQEVEINL SGAATANDVADVADDLFDVLPAARAPPPHIAHGSRIYTGDDGQDFAHVVS DIWIGVILTLLIVFVIFFICACFVYHKFQQWKNSYRANHSDPTIEICRRC PPDYEAESLPSYTIVSGLPTYDDALEEFRKAGIILTPAMVPIIKIFECNE TGKEQAVGYSLVETNIASADAAADNVSLASTTCNCGNSSPTSSLPSYSAA TAAVMAAAAAAPPQVIELSPEHLASLSQKRLSLQISFNNSVRRQSPLRNH LLRSRAVGNTAGVGPSEAAGPAIHGSGAHGVHGGGGATILPVLHRSSSTI SLSNERQLLDQRLRHLHHRGSLY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10387-PA | 200 | GF10387-PA | 1..186 | 1..185 | 784 | 82.3 | Plus |
Dana\GF10388-PA | 254 | GF10388-PA | 6..159 | 185..336 | 540 | 77.9 | Plus |
Dana\GF10377-PA | 329 | GF10377-PA | 106..219 | 144..252 | 209 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13532-PA | 425 | GG13532-PA | 1..425 | 1..423 | 2181 | 97.6 | Plus |
Dere\GG13522-PA | 342 | GG13522-PA | 113..229 | 144..255 | 203 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23316-PA | 431 | GH23316-PA | 1..431 | 1..423 | 1451 | 71.7 | Plus |
Dgri\GH10048-PA | 253 | GH10048-PA | 7..253 | 184..423 | 744 | 70.1 | Plus |
Dgri\GH14476-PA | 338 | GH14476-PA | 115..226 | 144..247 | 198 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
comm3-PE | 423 | CG42334-PE | 1..423 | 1..423 | 2158 | 100 | Plus |
comm3-PD | 423 | CG42334-PD | 1..423 | 1..423 | 2158 | 100 | Plus |
comm3-PC | 378 | CG42334-PC | 141..378 | 186..423 | 1213 | 100 | Plus |
comm2-PA | 343 | CG7554-PA | 113..286 | 144..310 | 222 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13626-PA | 435 | GI13626-PA | 1..435 | 1..423 | 1410 | 71.4 | Plus |
Dmoj\GI13622-PA | 333 | GI13622-PA | 113..224 | 144..247 | 199 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25498-PA | 209 | GL25498-PA | 1..182 | 1..184 | 737 | 82 | Plus |
Dper\GL25481-PA | 344 | GL25481-PA | 101..289 | 130..312 | 217 | 28.6 | Plus |
Dper\GL25499-PA | 68 | GL25499-PA | 1..68 | 351..423 | 201 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17371-PA | 422 | GA17371-PA | 1..422 | 1..423 | 1661 | 80.2 | Plus |
Dpse\GA20435-PA | 348 | GA20435-PA | 101..289 | 130..312 | 217 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24476-PA | 423 | GM24476-PA | 1..423 | 1..423 | 2212 | 99.3 | Plus |
Dsec\GM24466-PA | 274 | GM24466-PA | 113..235 | 144..268 | 224 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12549-PA | 241 | GD12549-PA | 4..241 | 186..423 | 1227 | 98.3 | Plus |
Dsim\GD12539-PA | 339 | GD12539-PA | 113..229 | 144..255 | 207 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13964-PA | 439 | GJ13964-PA | 1..439 | 1..423 | 1448 | 71.7 | Plus |
Dvir\GJ13958-PA | 334 | GJ13958-PA | 112..225 | 144..252 | 206 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20752-PA | 455 | GK20752-PA | 1..455 | 1..423 | 1505 | 72.2 | Plus |
Dwil\GK20674-PA | 361 | GK20674-PA | 138..230 | 144..230 | 202 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19827-PA | 423 | GE19827-PA | 1..423 | 1..423 | 2169 | 97.2 | Plus |
Dyak\GE22836-PA | 186 | GE22836-PA | 1..185 | 1..185 | 944 | 96.8 | Plus |
Dyak\GE19814-PA | 341 | GE19814-PA | 113..229 | 144..255 | 202 | 32.2 | Plus |
Dyak\GE22823-PA | 339 | GE22823-PA | 113..229 | 144..255 | 202 | 32.2 | Plus |