BDGP Sequence Production Resources |
Search the DGRC for IP12648
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 126 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | sun-RB |
Protein status: | IP12648.pep: gold |
Preliminary Size: | 1566 |
Sequenced Size: | 3735 |
Gene | Date | Evidence |
---|---|---|
CG5917 | 2005-01-01 | Successful iPCR screen |
sun | 2008-04-29 | Release 5.5 accounting |
sun | 2008-08-15 | Release 5.9 accounting |
CG34420 | 2008-08-15 | Release 5.9 accounting |
sun | 2008-12-18 | 5.12 accounting |
CG34420 | 2008-12-18 | 5.12 accounting |
3735 bp (3735 high quality bases) assembled on 2006-09-20
GenBank Submission: BT029092
> IP12648.complete TTTTTTTTTTTTTTTTTTTTATTTTTGTAGAATTTTTCTTTTATTTCCGG TTTATTTTTATGGAAATGCGTGTCGTTCTATTCGAGTGCACGCATTGCTT CTGCTGCATTTTACTTTTATTTTGCGTTTTTTTTTTCGAGTGGTATATAT GTATATATGTAGCTATGCATACACGAACAACATTTCGTTTTTTGATTTTG TTTTTCCGATTTTTCATTTGTGTTTTGTTAACTAACCTAATACAGATATT CAGATGGATTCACATGCAGCCAGGGTGAAAAATCTCATTTTAATTGAATT GCTGGCGTTGCTTACAGTTTTGTATGTTGTTTGACCCTATGATCCTGGCA TAAATGCCAACTGCTGCAATTAATTCGTTTCGATGATTAATACAAGTATT CGTTTGTATTTATGTATGTGTGATGTTTGTGATTAAATATATTGCGCTTA ATTGCGATAATTTGCGTGAATCATTGATGTGTGCCCTACATATATAATAC AGTCACAGGCAAGCCAAGAACGATTTCGGTTTGCGGTTCGGTGCTCGCTG CGTCGCGCATACGCCCCATGGTACAGCAACATCAATAAGTATCCGCATTG TGCATAAATTATGCATTGCCACAACACCAAATAAGTATAGCTGCAAACAA TTATGGGCTAAATACTAGTACATTTATTATTATTATTTATTCATACGCCT ATCAATGCAACCTATGGAAGTAAATTACGAGTACACACTATTTATTCACG AGGTTCGCCACGACAGTTCTTCGTTCACTTTTCGACCAGAGGGGGCAAGT GATGGCAGCACAAAGGATCTAGTTTATGTACATATTGGCTTCTTTAACGA ATTTCCAATTGGCTTTATCAATATGTGTTTCTCATTCCCAAAGAAAATAA TGAAATATTGAATATCTAAAGAAAAAGTATTCCCTTGAAATTGAACTGTT TTAAAGACCCTTCCCGGGTTTTCAGTACCTCAGTAAACGCCCTCCTTTCC CGAAATCTCGGCGAGCCGAACCGCAAGCCAAAATCTCTTATGTTAATTCC AGTTTACTGAAACAGTTCGCTGACCGTAAAACTCGTTGTCGTGGCCGCGA TGACCGCCGGATTGGTGCGATTGGAGACGGAGTCCCTCGACTCCGGACCG CGTTGCCAGAAGTGCTCCCCCGTCAAGGTGGCAGTGGTTCGATTGGCCCG CTCCATGGGCGGCTCATCGCGTCGCTGCCTCACCGCCTGCGCCTGCGGTC ACGAGGACATGTAGGTGCACTGCGTCTTGGGCTGCGGCTCCGTCTGCTCA ATGGGCTGGATGGCCGCTCGCTTCCAGTAATCCCGCACCGTTTCCACCGT TTCCATGATGCGCAGAAAATTCCTGCCCGCGAGCATGGCCACATCCTCCT CGCTCCAGTTGTGATCCTCCAGCAGGGCGGCCAAGAGCTCGGGATATTTG GACACATCCTCCAGTCCCAAGGGCGGCAGCTCGATGCCATCGTATCCGGC TCCCAATCCAATGTGCTGTATGCCGGCAATGGCCCGCACATACTTAATGT GCTCGATCACGTCCTGGAGGCGCGCCTGCCGCCCACATGCCACATCCTCG GAGTCAAAGCTCAGCATGATAAGACCCCCGTTCTCGGCCACCAGGCGTAA GATGTCATCCGGCACATTTCTCGTCGAATTGCACAGCTGGCGGGCGGCGG AATGAGAGAAGATGACCGGAGCGCGGGTCACCTGAAGTACATCCCTGGCC GTGGCATCCGAGCTGTGCGACAGATCTATCATCATGCCCAGCCGGTTCAT CTCACGCACAATCGCCTTGCCAAAGGGCGTGAGTCCCTGTTCCGCCGGCG ATGCACTCGATCCTGCCCATGAGACGTCACAGCGATGGGTCAGGCTGAGA TAGCGTGCGCCCAGTGAGTAAAAGGATCGCAGGACTCCCAGGGAGGAGCC AATCGTGTGGCCACCTTCCACGCCAATTAGCGAGGCCAGGAGTCCCCGGC GATGTGCATCGACAATGTCCTGCGAGGATGTGGCCAGCACCGTTTCCCGG GCGTACATGTCCGACAATCGCCGCACAATGTCGATCTGCTCCAGAGCCAA CTGGACCGCGTCCAAGCCTTGCGCCTCGCACGGCACATATGCTGACCACA CTTGGACGCTGACTAATCCCTGCTTGAGTCGCTCCATGTCCGTTTGCGCC CACGCCGGTCGCGACCACAGTGATTTGTGGTCCACGTCGTGGCTGAGATG GAGTTCGAGGCTGCTGTGGGCGTACTTGCGAACATTCCAGGCATAATTGT TGTGCCCGTCGACCAGCGGCACCTCACGCAGGATTCGACGAACGATTCTC AGTCTTTGGGCATGGGAATTGCGGCTGGGCGCCATAAGGAAGTGCTGGTA GGCCAAAGTGGCGGCGATGGCCAGTAGACAGATGGCGCTGACCAGGGTGA TGGCCACCAGCCAGGATCCTCTCCTGCCCTTCTGTCCGCCATCTGGTCCG GCATTCGCCTTCCTTGACGCCTTTCCCTTCGCTTTACCAGTGGCGCCAGC TCCAGTCGTGGAACCCAGCGATGTGGGCGACTTGGCGTCCAGACCAACTA TATCTCCACCGACGACCACGCCGCCGGCGAGGGGATTGCCAAAGTTCACC TTTGACTTCTGGATGCTGGCTATCTCGCCGCCGGAATCGCTGTTCGAGAT CGAGTTCTGGCGGGACAGTGTGCGGCGGATGTTCGAGTGCTCGGTGACGT CGGGCAATCCACCGAAACCAGTTGTCTGGTAGTCCATGTAGTTGTCGAAG TGCATGTAGGAGCAGCTACCCGCATCTCCCGGTCCACCCGGTATGGGCAG CCCATTCTCGTCTAGCTCAACGGCTGGTGGCGGCGGTGGCGACGGCGGTG GCAGGTTGTCGCCCTTGAAGGAAACCCGCTTAGGTTTGCCCTGACCGCCG GCCAGACGACGGCCCCGACCCAAGGTGCCAGAGCCCATCATGTAGGCCAG CGAACCACAGCCCACCACTGCATCCTGCTGCTGGTGGTGCTGTTGCAGGG ACTGAAGGCCGCACGCTCCGAAGCGAAAGTGCGGAATGCAGGTGGTGGTC ATGCTGCCCGCACCGCATTCACTGCCCTCGAAATCCGACTCGACGTCCGT AACGAAGGCGGCGGGCTGGAAACCGCGCGGCAAAGTAGCCGCCACCGAGG GATTTGGATTGGGATTTATGTTTGGATTATGCCCGCCACCACCCGATGCC GGCATCCTTTGGCGTCCCAGTGTTCCGGTGCACAGGATATTCATTTGCTG TGGATGGGAATATCTTATATATTTTTTGTGTAGCGTGAATATATTTCGAA TAAACCGATCACAATGACTGCCTGGAGAGCTGCCGGAATTACCTACATCC AATACTCCAACATCGCCGCTCGCATTTTGCGCGAGTCCTTGAAGACGGGA CTGCGTGCGGATGCCGCCAAGCGCGACGCGAGCCATGTGAAGTTCACTCC CTGGGCAAATGGCAAGCCAGCTCATGAAAGGGCTTAGGTGTTCCATCGTC AAATTAATAATTTAAAAACTGGCAGCGTCAAACCCAATCGGAATCCTAGA TGCTTTTCAGTGGCCACTCGAGAATGATTCGCAACAACTAAGATCCGCCG AAGCTGCAATGTTGTAAAATCATGAAAAATAAATAAAATTAAATAAATGT AATTTATTTAAACACGATGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34420-RC | 3949 | CG34420-RC | 664..3949 | 3306..22 | 16390 | 99.9 | Minus |
sun-RB | 998 | sun-RB | 147..561 | 3306..3720 | 2075 | 100 | Plus |
sun-RA | 948 | sun-RA | 147..365 | 3306..3524 | 1095 | 100 | Plus |
sun-RA | 948 | sun-RA | 364..511 | 3573..3720 | 740 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11841279..11843407 | 20..2147 | 10415 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 11845030..11845663 | 2145..2778 | 3110 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 11853071..11853601 | 2776..3306 | 2625 | 99.6 | Plus |
chrX | 22417052 | chrX | 15737700..15737845 | 3719..3574 | 730 | 100 | Minus |
chrX | 22417052 | chrX | 15738727..15738857 | 3523..3393 | 655 | 100 | Minus |
chrX | 22417052 | chrX | 15738977..15739063 | 3392..3306 | 435 | 100 | Minus |
chrX | 22417052 | chrX | 15738139..15738188 | 3573..3524 | 250 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11850476..11852604 | 20..2147 | 10595 | 100 | Plus |
3L | 28110227 | 3L | 11854246..11854879 | 2145..2778 | 3170 | 100 | Plus |
3L | 28110227 | 3L | 11862284..11862814 | 2776..3306 | 2655 | 100 | Plus |
X | 23542271 | X | 15847858..15848004 | 3720..3574 | 735 | 100 | Minus |
X | 23542271 | X | 15848886..15849016 | 3523..3393 | 655 | 100 | Minus |
X | 23542271 | X | 15849136..15849222 | 3392..3306 | 435 | 100 | Minus |
X | 23542271 | X | 15848298..15848347 | 3573..3524 | 250 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11843576..11845704 | 20..2147 | 10605 | 99.9 | Plus |
3L | 28103327 | 3L | 11847346..11847979 | 2145..2778 | 3170 | 100 | Plus |
3L | 28103327 | 3L | 11855384..11855914 | 2776..3306 | 2655 | 100 | Plus |
X | 23527363 | X | 15855956..15856102 | 3720..3574 | 735 | 100 | Minus |
X | 23527363 | X | 15856984..15857114 | 3523..3393 | 655 | 100 | Minus |
X | 23527363 | X | 15857234..15857320 | 3392..3306 | 435 | 100 | Minus |
X | 23527363 | X | 15856396..15856445 | 3573..3524 | 250 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11841288..11843406 | 29..2146 | 99 | <- | Plus |
chr3L | 11845032..11845660 | 2147..2775 | 99 | <- | Plus |
chr3L | 11853071..11853601 | 2776..3306 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sun-RB | 1..174 | 3364..3537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sun-RB | 1..174 | 3364..3537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sun-RB | 1..174 | 3364..3537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sun-RB | 1..174 | 3364..3537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sun-RB | 1..174 | 3364..3537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34420-RC | 628..3752 | 188..3311 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34420-RC | 628..3752 | 188..3311 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44837-RC | 628..3746 | 194..3311 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34420-RC | 628..3752 | 188..3311 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG44837-RC | 628..3746 | 194..3311 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11850485..11852603 | 29..2146 | 99 | <- | Plus |
3L | 11854248..11854876 | 2147..2775 | 100 | <- | Plus |
3L | 11862284..11862814 | 2776..3306 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11850485..11852603 | 29..2146 | 99 | <- | Plus |
3L | 11854248..11854876 | 2147..2775 | 100 | <- | Plus |
3L | 11862284..11862814 | 2776..3306 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11850485..11852603 | 29..2146 | 99 | <- | Plus |
3L | 11854248..11854876 | 2147..2775 | 100 | <- | Plus |
3L | 11862284..11862814 | 2776..3306 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11843585..11845703 | 29..2146 | 99 | <- | Plus |
arm_3L | 11847348..11847976 | 2147..2775 | 100 | <- | Plus |
arm_3L | 11855384..11855914 | 2776..3306 | 100 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11843585..11845703 | 29..2146 | 99 | <- | Plus |
3L | 11847348..11847976 | 2147..2775 | 100 | <- | Plus |
3L | 11855384..11855914 | 2776..3306 | 100 | == | Plus |
Translation from 2416 to 2781
> IP12648.hyp MASRQMALTRVMATSQDPLLPFCPPSGPAFAFLDAFPFALPVAPAPVVEP SDVGDLASRPTISPPTTTPPARGLPKFTFDFWMLAISPPESLFEIEFWRD SVRRMFECSVTSGNPPKPVVW*
Translation from 3363 to 3536
> IP12648.pep MTAWRAAGITYIQYSNIAARILRESLKTGLRADAAKRDASHVKFTPWANG KPAHERA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17416-PA | 82 | GF17416-PA | 1..53 | 1..53 | 248 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19366-PA | 61 | GG19366-PA | 1..56 | 1..56 | 277 | 94.6 | Plus |
Dere\GG17423-PA | 64 | GG17423-PA | 1..53 | 1..53 | 208 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12534-PA | 56 | GH12534-PA | 3..56 | 2..55 | 230 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sun-PB | 57 | CG9032-PB | 1..57 | 1..57 | 296 | 100 | Plus |
sun-PA | 61 | CG9032-PA | 1..56 | 1..56 | 275 | 94.6 | Plus |
ATPsynepsilonL-PC | 64 | CG31477-PC | 1..52 | 1..52 | 215 | 76.9 | Plus |
ATPsynepsilonL-PB | 64 | CG31477-PB | 1..52 | 1..52 | 215 | 76.9 | Plus |
ATPsynepsilonL-PA | 64 | CG31477-PA | 1..52 | 1..52 | 215 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11196-PA | 56 | GI11196-PA | 3..56 | 2..55 | 219 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18058-PA | 62 | GL18058-PA | 4..58 | 3..57 | 239 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21492-PA | 62 | GA21492-PA | 4..58 | 3..57 | 239 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22520-PA | 61 | GM22520-PA | 1..56 | 1..56 | 277 | 94.6 | Plus |
Dsec\GM23863-PA | 64 | GM23863-PA | 1..53 | 1..53 | 212 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24676-PA | 61 | GD24676-PA | 1..56 | 1..56 | 277 | 94.6 | Plus |
Dsim\GD18671-PA | 64 | GD18671-PA | 1..53 | 1..53 | 212 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18479-PA | 56 | GJ18479-PA | 4..56 | 3..55 | 236 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19782-PA | 62 | GK19782-PA | 3..54 | 2..53 | 237 | 84.6 | Plus |