Clone IP12784 Report

Search the DGRC for IP12784

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:127
Well:84
Vector:pOT2
Associated Gene/TranscriptCG9777-RA
Protein status:IP12784.pep: gold
Preliminary Size:1259
Sequenced Size:1535

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9777 2005-01-01 Successful iPCR screen
CG9777 2008-04-29 Release 5.5 accounting
CG9777 2008-08-15 Release 5.9 accounting
CG9777 2008-12-18 5.12 accounting

Clone Sequence Records

IP12784.complete Sequence

1535 bp (1535 high quality bases) assembled on 2005-04-11

GenBank Submission: BT022870

> IP12784.complete
ACCAAACGAAACGCATCTCAACTGTCTAACAAAACAAGATTTGACAAAGT
GTTAAAAAATTTGAAAAAAAAAAAATTACAATACAATAATCATGTACAAT
TTGATAAAAAGTCGCACACTCTCCGACTACTTAAAGAAGCCAATGCCGCC
AAATTCTTTGAATAATGGCGGCAAAACAAACAATTCCGTGGGTAATACCA
ACAATCCGGCCGGAAATCTAAGTCCTGTTGCCGAAGAATGTGTGCCGCAT
CCAAAGAACAAAGAGCGTACGCTCGTTGAGGATTTGGCCAAAATAAATAA
ACTGTTCGAGTATCTGGAGGCTTCAGCTACGGACGATATGGATTTAGATA
ATTCAACTGTCGAGGATGTGGGAAAGGAAAGTTTATCGAATACGGTGCAG
GCATGGAAAGAAGTTCCCAATATAAAAAATAAATATTTTATCGGAGAACA
GGTGCCTGTGATGGATACTTCCGACTTTATGCTTATTTCTCGCAACAAGG
CAAAGAAGACTTTGCGTGCCAGGCAAATGCGTCTTGAGCAGGAAAGAAAG
GTGGCTCTGGAAGCCGCGAAATTGACCGAACAAAAAGGCATGGGGGATCC
TTCTTCGGTTCCAGGCAACGATAGCAACGATAATGAAGCCCAGCCAGTTG
TGCATCTGTCTCGTTCGCCCATCAAATATTCTATGGATGAACGCACTGGA
GTCAATCGCATGCGAGCCACCAAAAAGAAGCAGATCGAGCGTGCTCTTTT
CTCTGAGAATTCGATGCAATTGGATCAGGAGCAGATGCAACTAGCTGTCG
AAGAAGACGAAAACCAAAAGGCTGACGGTCCGGTGGCCGCTTTGACTCAC
AAAAGATATATACCCACCCACAAGGAATGGGAAGAGCAGCGTCGTCTTAA
AGCCGAAAACTCGCAAACCACAGTGGACCAGATGACTCCGGCCACCACGA
TGACCGCCAAAAGATACATACCCACCACCAAGGAATGGGACGAACAGCGT
CGTTTCAAGCTTAAGGCCAAGATGGAAACTAAAAAGAACGCCACTTCGGC
CAATTCAACTAACGAACTTGGGGCGGAGAAACGCAAAGGGAATAGCACTC
ATTATGGAGCAAATATTGATTGGACAAACTTAACTCGTACAAATAATAAT
TTTCAAAAGATGGCAAGTCAGCCAATGCCAATTGAAGGCGAGCAGAAAGA
TCGTCAAGTGAAGAAAGGAAATGTTATACGTTATACTATTGATGAATTGC
TGAAGTTGGAACCGCAACCAGACGATCTTGATGTGCCTGCTGAAGTTGCC
TTGATTGATAAAAAGTTACTGAAGGGCAATTAATATGATAACCACGCACA
ATTCTACGCAACTTGTTGGGCTTACATTTTGATTCGATTTATATTCGATT
TGGATCAGTTTCTATTTGTAATTTGTATTCTACCAACCTATGTATTTTTT
ATTACTTAAATTTGTCATTCTAAATAATAAAAAATATCATTGTTAGCCCA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP12784.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:37:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG9777-RA 1500 CG9777-RA 1..1500 1..1500 7500 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:46:37
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16520344..16521408 1499..435 5310 99.9 Minus
chrX 22417052 chrX 16521473..16521906 434..1 2170 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:16:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:46:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16630672..16631737 1500..435 5330 100 Minus
X 23542271 X 16631802..16632235 434..1 2170 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:27:52
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16638770..16639835 1500..435 5330 100 Minus
X 23527363 X 16639900..16640333 434..1 2170 100 Minus
Blast to na_te.dros performed 2019-03-15 17:46:35
Subject Length Description Subject Range Query Range Score Percent Strand
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 5132..5211 490..402 136 67.4 Minus
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 697..773 29..109 125 65.4 Plus
hobo 2959 hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). 2493..2561 1483..1418 121 68.1 Minus

IP12784.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:47:49 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16520344..16521408 435..1499 99 <- Minus
chrX 16521473..16521906 1..434 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:53:28 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
CG9777-RA 1..1242 92..1333 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:03:02 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
CG9777-RA 1..1242 92..1333 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:46:28 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
CG9777-RA 1..1242 92..1333 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:47:27 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
CG9777-RA 1..1242 92..1333 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:47:02 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
CG9777-RA 1..1242 92..1333 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:48:23 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
CG9777-RA 1..1499 1..1499 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:03:02 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
CG9777-RA 1..1499 1..1499 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:46:28 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
CG9777-RA 1..1499 1..1499 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:47:28 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
CG9777-RA 1..1499 1..1499 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:47:02 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
CG9777-RA 1..1499 1..1499 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:47:49 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
X 16630673..16631737 435..1499 100 <- Minus
X 16631802..16632235 1..434 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:47:49 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
X 16630673..16631737 435..1499 100 <- Minus
X 16631802..16632235 1..434 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:47:49 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
X 16630673..16631737 435..1499 100 <- Minus
X 16631802..16632235 1..434 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:46:28 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16524706..16525770 435..1499 100 <- Minus
arm_X 16525835..16526268 1..434 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:22:47 Download gff for IP12784.complete
Subject Subject Range Query Range Percent Splice Strand
X 16638771..16639835 435..1499 100 <- Minus
X 16639900..16640333 1..434 100   Minus

IP12784.pep Sequence

Translation from 91 to 1332

> IP12784.pep
MYNLIKSRTLSDYLKKPMPPNSLNNGGKTNNSVGNTNNPAGNLSPVAEEC
VPHPKNKERTLVEDLAKINKLFEYLEASATDDMDLDNSTVEDVGKESLSN
TVQAWKEVPNIKNKYFIGEQVPVMDTSDFMLISRNKAKKTLRARQMRLEQ
ERKVALEAAKLTEQKGMGDPSSVPGNDSNDNEAQPVVHLSRSPIKYSMDE
RTGVNRMRATKKKQIERALFSENSMQLDQEQMQLAVEEDENQKADGPVAA
LTHKRYIPTHKEWEEQRRLKAENSQTTVDQMTPATTMTAKRYIPTTKEWD
EQRRFKLKAKMETKKNATSANSTNELGAEKRKGNSTHYGANIDWTNLTRT
NNNFQKMASQPMPIEGEQKDRQVKKGNVIRYTIDELLKLEPQPDDLDVPA
EVALIDKKLLKGN*

IP12784.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:21:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15113-PA 444 GF15113-PA 1..430 1..399 303 28.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:21:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18241-PA 1786 GG18241-PA 150..521 1..315 540 40.1 Plus
Dere\GG21759-PA 448 GG21759-PA 46..435 76..410 330 29.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:44:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG9777-PA 413 CG9777-PA 1..413 1..413 2132 100 Plus
CG6304-PB 422 CG6304-PB 46..409 76..410 306 29.6 Plus
CG6304-PA 422 CG6304-PA 46..409 76..410 306 29.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:21:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14283-PA 532 GI14283-PA 213..526 147..411 157 24.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:21:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16045-PA 522 GL16045-PA 171..386 147..325 185 30.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:21:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26113-PA 524 GA26113-PA 171..390 147..325 179 29.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:21:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13385-PA 990 GM13385-PA 154..488 14..403 1038 59.1 Plus
Dsec\GM17143-PA 431 GM17143-PA 46..423 76..410 267 28.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:21:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21884-PA 322 GD21884-PA 46..221 76..219 162 31.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:21:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16242-PA 477 GJ16242-PA 181..463 147..399 204 30.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:21:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23795-PA 435 GK23795-PA 1..421 1..399 263 28.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:21:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15957-PA 1885 GE15957-PA 150..621 1..346 591 37.4 Plus
Dyak\GE13149-PA 438 GE13149-PA 46..406 76..387 285 28.9 Plus

IP12784.hyp Sequence

Translation from 91 to 1332

> IP12784.hyp
MYNLIKSRTLSDYLKKPMPPNSLNNGGKTNNSVGNTNNPAGNLSPVAEEC
VPHPKNKERTLVEDLAKINKLFEYLEASATDDMDLDNSTVEDVGKESLSN
TVQAWKEVPNIKNKYFIGEQVPVMDTSDFMLISRNKAKKTLRARQMRLEQ
ERKVALEAAKLTEQKGMGDPSSVPGNDSNDNEAQPVVHLSRSPIKYSMDE
RTGVNRMRATKKKQIERALFSENSMQLDQEQMQLAVEEDENQKADGPVAA
LTHKRYIPTHKEWEEQRRLKAENSQTTVDQMTPATTMTAKRYIPTTKEWD
EQRRFKLKAKMETKKNATSANSTNELGAEKRKGNSTHYGANIDWTNLTRT
NNNFQKMASQPMPIEGEQKDRQVKKGNVIRYTIDELLKLEPQPDDLDVPA
EVALIDKKLLKGN*

IP12784.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:50:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG9777-PA 413 CG9777-PA 1..413 1..413 2132 100 Plus
CG6304-PB 422 CG6304-PB 46..409 76..410 306 29.6 Plus
CG6304-PA 422 CG6304-PA 46..409 76..410 306 29.6 Plus