Clone IP12857 Report

Search the DGRC for IP12857

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:128
Well:57
Vector:pOT2
Associated Gene/TranscriptCG34056-RA
Protein status:IP12857.pep: gold
Preliminary Size:2043
Sequenced Size:1302

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG34056 2008-04-29 Picked prior to 5.5
CG34056 2008-08-15 Release 5.9 accounting
CG34056 2008-12-18 5.12 accounting

Clone Sequence Records

IP12857.complete Sequence

1302 bp assembled on 2008-06-09

GenBank Submission: BT033053

> IP12857.complete
CGGCGATGAGCGACACCGCGAAATGCATTCGCTGTGCCCCCGGCTCGTTT
TGTAAGAGCTCCACTCCAGTGCCCTCCATTTCCCCACAGCGGAATCGCCA
AATGCCAGCTGGAGCTGGTTAGTTGCAGCCAGGAACACTCTCGCCATGTA
TCGCAATATACTCTGCCTGGTGCTGGGCCTCATCATTGGCATTCAACTGA
CAGACTTCTTAGAGTACTTTCAGCTGACCGATAGTCAGTTCGCCAGCACG
TCCATTACGCAGCTGGAGGAAGGGGCCAGCCAGCTGGCGACGGAGGAGGA
ACTGGCCTTGTGGCTCCATAACGAGACACGGGTACTCTGCATGGTGCTAA
CCCTGCCAAAGAATCACCAATCAAGAGTGAGACGAGTTAAGGGCACATGG
GGCAGGCGCTGCAACAAGCTGATCTTCATCAGCAGCCAGGAGGATCGGGA
ACTGGGCGTCATTGATGTGGGCGTGCCCGAGGATCGAAACAACCTGTATC
TCAAAATGAGGAAGGCCCTAGAGTATGTGTACCGGAACCATGGAGAAGAC
TACGACTGGTTCCTCAAGGCAGATGATGACACCTTTGTGATAATGGAAAA
CCTGCGCTTCCTGCTCTATCCCTATGATCCCGAGGCAGCGCTCTACTTTG
GCCACAGATTCCGCACCACCTTTCCGCAGGGCTACATGTCCGGAGGAGCT
GGCTATGTGATGAGTCGGGATGCACTGCGTCGGCTCAATCTCTTTGCCTT
CAACAACAGCCAATTCTGCCCGATTAACAACAATTCAGAGGACAGGCAGA
TTGGCTTCTGCCTGCAAAATGTGGGAGTAGTTGCAGGGGATTCGCGGGAT
GAGGAAGGCCGGGATCGGTTTCTGCCCTTGTCTCTCAAATTTATGCTGCC
TACCTTTCCCACCGACAATTGGCTGCCCAAACTGACATTTTATGAACCAG
TGAATGAAACTGGCTCGACTTCGGGAATCAGCTTTCACTATGTCAAAATC
CACGAGTTCGAAATGTATGAATACCTGCTATATCGATTGCACATTTTTGG
AACTCCCTTGTCCCAGAGAACGCTGCCACCCCGACTGGGTCCCGATGAAC
TGCAGAATCAGCTGAATCAGTGGGCTCAAGAAAATAGCACGAATTCAAAC
GCGTGGCTGAAACAAGAATAATATATATAGTATATTAGTACATATTTAAG
ACTCATTTTAACATACCGACAGTCAAATAGAATTAGTTTTTAAACTCTTA
AGAATATCATTAAATAGAAAACAATTGTTTTTATAAAAAAAAAAAAAAAA
AA

IP12857.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:33:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG34056-RA 1402 CG34056-RA 110..1394 1..1285 6425 100 Plus
CG34056.a 1238 CG34056.a 167..1238 213..1284 5360 100 Plus
CG34056.a 1238 CG34056.a 20..166 1..147 735 100 Plus
CG2975.a 1564 CG2975.a 502..565 393..456 185 85.9 Plus
CG2975.a 1564 CG2975.a 660..716 551..607 165 85.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:37:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 895770..896353 1..582 2720 98.1 Plus
chr3L 24539361 chr3L 896410..896778 583..951 1710 97.6 Plus
chr3L 24539361 chr3L 896832..897166 950..1284 1630 99.1 Plus
chr2L 23010047 chr2L 2840998..2841061 393..456 185 85.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:17:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:37:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 895970..896551 1..582 2910 100 Plus
3L 28110227 3L 896608..896976 583..951 1845 100 Plus
3L 28110227 3L 897030..897365 950..1285 1680 100 Plus
2L 23513712 2L 2841313..2841376 393..456 185 85.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:29:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 895970..896551 1..582 2910 100 Plus
3L 28103327 3L 896608..896976 583..951 1845 100 Plus
3L 28103327 3L 897030..897365 950..1285 1680 100 Plus
3L 28103327 3L 898126..898204 677..755 140 78.4 Plus
Blast to na_te.dros performed 2019-03-16 01:37:11
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy7 5486 gypsy7 GYPSY7 5486bp 3148..3222 1198..1272 113 66.2 Plus

IP12857.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:38:20 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 895770..896353 1..582 98 -> Plus
chr3L 896410..896776 583..949 97 -> Plus
chr3L 896832..897166 950..1284 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:53:39 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
CG34056-RA 1..1026 146..1171 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:02:22 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
CG34056-RA 1..1026 146..1171 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:08:01 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
CG34056-RA 1..1026 146..1171 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:47:46 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
CG34056-RA 1..1026 146..1171 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:38:12 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
CG34056-RA 1..1026 146..1171 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:48:48 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
CG34056-RA 20..1303 1..1284 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:02:22 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
CG34056-RA 20..1303 1..1284 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:08:01 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
CG34056-RA 20..1303 1..1284 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:47:46 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
CG34056-RA 20..1303 1..1284 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:38:12 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
CG34056-RA 20..1303 1..1284 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:38:20 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
3L 895970..896551 1..582 100 -> Plus
3L 896608..896974 583..949 100 -> Plus
3L 897030..897364 950..1284 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:38:20 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
3L 895970..896551 1..582 100 -> Plus
3L 896608..896974 583..949 100 -> Plus
3L 897030..897364 950..1284 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:38:20 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
3L 895970..896551 1..582 100 -> Plus
3L 896608..896974 583..949 100 -> Plus
3L 897030..897364 950..1284 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:08:01 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 895970..896551 1..582 100 -> Plus
arm_3L 896608..896974 583..949 100 -> Plus
arm_3L 897030..897364 950..1284 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:54:20 Download gff for IP12857.complete
Subject Subject Range Query Range Percent Splice Strand
3L 895970..896551 1..582 100 -> Plus
3L 896608..896974 583..949 100 -> Plus
3L 897030..897364 950..1284 100   Plus

IP12857.pep Sequence

Translation from 145 to 1170

> IP12857.pep
MYRNILCLVLGLIIGIQLTDFLEYFQLTDSQFASTSITQLEEGASQLATE
EELALWLHNETRVLCMVLTLPKNHQSRVRRVKGTWGRRCNKLIFISSQED
RELGVIDVGVPEDRNNLYLKMRKALEYVYRNHGEDYDWFLKADDDTFVIM
ENLRFLLYPYDPEAALYFGHRFRTTFPQGYMSGGAGYVMSRDALRRLNLF
AFNNSQFCPINNNSEDRQIGFCLQNVGVVAGDSRDEEGRDRFLPLSLKFM
LPTFPTDNWLPKLTFYEPVNETGSTSGISFHYVKIHEFEMYEYLLYRLHI
FGTPLSQRTLPPRLGPDELQNQLNQWAQENSTNSNAWLKQE*

IP12857.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:55:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24418-PA 341 GF24418-PA 1..338 1..335 1323 70.1 Plus
Dana\GF24419-PA 337 GF24419-PA 1..333 1..333 899 50.4 Plus
Dana\GF15693-PA 390 GF15693-PA 20..377 3..333 668 39.9 Plus
Dana\GF14985-PA 384 GF14985-PA 74..364 49..335 654 45.4 Plus
Dana\GF14913-PA 452 GF14913-PA 21..362 3..314 581 36.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:55:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14745-PA 342 GG14745-PA 1..342 1..341 1747 94.7 Plus
Dere\GG14746-PA 339 GG14746-PA 5..337 1..333 868 50.9 Plus
Dere\GG24047-PA 388 GG24047-PA 20..375 3..332 681 41 Plus
Dere\GG24890-PA 386 GG24890-PA 13..329 5..302 674 45.5 Plus
Dere\GG10669-PA 453 GG10669-PA 21..354 3..314 601 38.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:55:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16869-PA 334 GH16869-PA 1..333 1..333 1056 56.9 Plus
Dgri\GH25082-PA 347 GH25082-PA 48..329 53..330 661 46.5 Plus
Dgri\GH25123-PA 389 GH25123-PA 20..379 3..335 651 37.8 Plus
Dgri\GH25083-PA 339 GH25083-PA 33..315 53..330 650 45.1 Plus
Dgri\GH10852-PA 339 GH10852-PA 33..315 53..330 649 44.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG34056-PA 341 CG34056-PA 1..341 1..341 1819 100 Plus
CG34057-PA 355 CG34057-PA 21..355 1..335 900 49.6 Plus
CG34057-PB 344 CG34057-PB 55..344 47..335 837 51.7 Plus
C1GalTA-PA 388 CG9520-PA 20..376 3..333 669 40.9 Plus
C1GalTA-PC 388 CG9520-PC 20..376 3..333 669 40.9 Plus
C1GalTA-PB 388 CG9520-PB 20..376 3..333 669 40.9 Plus
CG2975-PA 385 CG2975-PA 76..338 53..313 650 50.8 Plus
CG8708-PC 444 CG8708-PC 15..346 3..314 588 39.3 Plus
CG8708-PD 450 CG8708-PD 21..352 3..314 588 39.3 Plus
CG8708-PB 450 CG8708-PB 21..352 3..314 588 39.3 Plus
tgy-PE 373 CG7440-PE 40..363 10..319 517 36.4 Plus
tgy-PC 373 CG7440-PC 40..363 10..319 517 36.4 Plus
CG2983-PB 344 CG2983-PB 26..327 3..322 477 35.8 Plus
CG18558-PB 588 CG18558-PB 310..584 51..322 470 38.4 Plus
CG3119-PA 355 CG3119-PA 8..330 3..319 457 35.3 Plus
CG34452-PC 318 CG34452-PC 53..312 62..315 371 34.7 Plus
CG34452-PB 318 CG34452-PB 53..312 62..315 371 34.7 Plus
CG34451-PC 253 CG34451-PC 2..245 70..305 305 31.2 Plus
CG34451-PA 253 CG34451-PA 2..245 70..305 305 31.2 Plus
CG3119-PB 184 CG3119-PB 8..173 3..171 291 38.6 Plus
CG34451-PB 166 CG34451-PB 7..158 160..305 178 30.9 Plus
CG18558-PB 588 CG18558-PB 19..297 8..311 172 24.3 Plus
CG9109-PA 535 CG9109-PA 278..442 67..230 156 27.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:55:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11429-PA 336 GI11429-PA 1..329 1..331 1028 54.2 Plus
Dmoj\GI12045-PA 391 GI12045-PA 20..363 3..319 661 40.4 Plus
Dmoj\GI17446-PA 390 GI17446-PA 13..345 5..314 603 39.7 Plus
Dmoj\GI12068-PA 352 GI12068-PA 46..327 53..335 591 43.2 Plus
Dmoj\GI12057-PA 440 GI12057-PA 46..271 53..277 574 48.2 Plus
Dmoj\GI12057-PA 440 GI12057-PA 231..411 152..319 261 36.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:55:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16899-PA 341 GL16899-PA 1..337 1..333 1197 66.1 Plus
Dper\GL15447-PA 379 GL15447-PA 65..354 39..326 668 47.5 Plus
Dper\GL25549-PA 390 GL25549-PA 20..375 3..332 665 39.3 Plus
Dper\GL26713-PA 452 GL26713-PA 21..360 3..314 589 38.8 Plus
Dper\GL14674-PA 303 GL14674-PA 25..290 49..309 490 40.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23793-PA 340 GA23793-PA 1..337 1..333 1176 65.5 Plus
Dpse\GA21851-PA 390 GA21851-PA 20..375 3..332 665 39.3 Plus
Dpse\GA28803-PA 347 GA28803-PA 65..339 39..311 650 48.6 Plus
Dpse\GA29031-PA 452 GA29031-PA 21..360 3..314 589 38.8 Plus
Dpse\GA20354-PA 369 GA20354-PA 43..359 8..319 521 37.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14363-PA 340 GM14363-PA 1..339 1..338 1773 97.1 Plus
Dsec\GM14364-PA 335 GM14364-PA 1..335 1..335 853 49.6 Plus
Dsec\GM12650-PA 379 GM12650-PA 11..367 3..333 688 40.6 Plus
Dsec\GM18370-PA 383 GM18370-PA 78..336 54..313 649 51.3 Plus
Dsec\GM20714-PA 446 GM20714-PA 21..355 3..314 598 38.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:55:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13582-PA 333 GD13582-PA 1..333 1..335 1473 85.4 Plus
Dsim\GD22375-PA 388 GD22375-PA 20..376 3..333 686 40.6 Plus
Dsim\GD23186-PA 386 GD23186-PA 78..354 54..333 667 49.5 Plus
Dsim\GD10181-PA 446 GD10181-PA 21..355 3..314 602 38.8 Plus
Dsim\GD24465-PA 373 GD24465-PA 39..363 3..319 516 36.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:55:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13625-PA 339 GJ13625-PA 1..334 1..334 1072 57.6 Plus
Dvir\GJ14135-PA 386 GJ14135-PA 20..384 3..340 669 38.6 Plus
Dvir\GJ14139-PA 441 GJ14139-PA 16..348 3..314 623 39 Plus
Dvir\GJ14138-PA 335 GJ14138-PA 12..327 4..324 600 39.4 Plus
Dvir\GJ15256-PA 373 GJ15256-PA 84..366 46..320 555 41.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:55:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17363-PA 355 GK17363-PA 1..349 1..341 998 54.3 Plus
Dwil\GK14790-PA 390 GK14790-PA 20..376 3..332 653 38.7 Plus
Dwil\GK14791-PA 371 GK14791-PA 20..363 3..319 649 39 Plus
Dwil\GK24753-PA 440 GK24753-PA 21..360 3..319 632 40.4 Plus
Dwil\GK24754-PA 403 GK24754-PA 33..362 5..330 615 40.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:55:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21107-PA 342 GE21107-PA 1..340 1..339 1735 95 Plus
Dyak\GE21108-PA 339 GE21108-PA 5..337 1..333 873 49.9 Plus
Dyak\GE10709-PA 388 GE10709-PA 20..376 3..333 692 40.9 Plus
Dyak\GE18184-PA 385 GE18184-PA 76..338 53..313 663 51.1 Plus
Dyak\GE23251-PA 451 GE23251-PA 21..355 3..314 618 39.4 Plus

IP12857.hyp Sequence

Translation from 145 to 1170

> IP12857.hyp
MYRNILCLVLGLIIGIQLTDFLEYFQLTDSQFASTSITQLEEGASQLATE
EELALWLHNETRVLCMVLTLPKNHQSRVRRVKGTWGRRCNKLIFISSQED
RELGVIDVGVPEDRNNLYLKMRKALEYVYRNHGEDYDWFLKADDDTFVIM
ENLRFLLYPYDPEAALYFGHRFRTTFPQGYMSGGAGYVMSRDALRRLNLF
AFNNSQFCPINNNSEDRQIGFCLQNVGVVAGDSRDEEGRDRFLPLSLKFM
LPTFPTDNWLPKLTFYEPVNETGSTSGISFHYVKIHEFEMYEYLLYRLHI
FGTPLSQRTLPPRLGPDELQNQLNQWAQENSTNSNAWLKQE*

IP12857.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:51:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG34056-PA 341 CG34056-PA 1..341 1..341 1819 100 Plus
CG34057-PA 355 CG34057-PA 21..355 1..335 900 49.6 Plus
CG34057-PB 344 CG34057-PB 55..344 47..335 837 51.7 Plus
C1GalTA-PA 388 CG9520-PA 20..376 3..333 669 40.9 Plus
C1GalTA-PC 388 CG9520-PC 20..376 3..333 669 40.9 Plus