BDGP Sequence Production Resources |
Search the DGRC for IP12904
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 129 |
Well: | 4 |
Vector: | pOT2 |
Associated Gene/Transcript | prt-RB |
Protein status: | IP12904.pep: gold |
Preliminary Size: | 1677 |
Sequenced Size: | 2164 |
Gene | Date | Evidence |
---|---|---|
CG10251 | 2005-01-01 | Successful iPCR screen |
CG10251 | 2008-04-29 | Release 5.5 accounting |
CG10251 | 2008-08-15 | Release 5.9 accounting |
CG10251 | 2008-12-18 | 5.12 accounting |
2164 bp assembled on 2007-04-18
GenBank Submission: BT030447
> IP12904.complete GCAGCACCACCACCTGTTGCCACTCCGGATAGATACACTCGGGAGCATAC TTTGTGGCGCGTATCGCGAGCCATATGGCAGCCTAATTTGGCGCTATCAG TGTGCCGTCCAATTAGCCATGTCGGAGAAATCGAACCGTGCTCAAATACA CTCCAACTCCCGATCGAAATCCCAAAACCAAGCGGCTGTTCAACTGAATG CCCCGGGCAGACGCAGCTCCACTCCATCCGGAGCCAATGGCTCCTCCAAT CGCTGCCTGATTGCCGTGATTGTTTACCTGGCCCTGCTGCTAGATAACAT GCTGCTAACCGTAATTGTGCCCATCCTGCCGGATTATCTGGCCAGCCTGG AGGCGGATACATCGTCCGCGGTAGTGCTGAGTCTGGAGGACACATCGTCA TTCTCGAAACTTGGCTATCGGTCTGGAGAATCGCCAGGCGGCGGTCATCC TCAACTGTACATTTCTAAGCATCCGATTCCGGGCAAATCAATGGTTAACT TCACACTGCTCCAGCTGTCCACAGAAGCCACAACCACGACCACCAGCATC GCCACAACGACCAACTCCCCGCACAATTCTACGTCCATGCAATCGCCTCC AAAGCTGACGGTTGGCCAGTCGGGCGGCACTAATGTCACTGGAATTGGGC ACAAGAGCAGGAACAGGAAGCTGGCCTCCGGCCATCCCCCCACCCACGAC AACAGCAGCAATGACAACAGCAACAAGGAGCTGACCTTGACGCAGGAGAA TGGCTCCATCGGCCTGTTGCTGGCCATGAAGGCTCTGGTCCAATTAATTT TCAATCCGATTGTCGGCAATGCGTCCAGCAAGTTTGGTTACCGCCTTCCC ATTGTGGTCGGCACCTTCTTCCTGCTCCTCTCCTCGCTGGTTTTCACCGT TGGTGAATCCTACTGGGCTCTCCTGGTGGCCCGGGCTGTGCAGGGCGTGG GATCCGCTTGCATCAACATATGCGGCATGAGCCTGGTGGCCCAGCATTAT CCGGAGGAGGCACGTCGTTCCAAGGTGATGGGCATCATCCTGGGCAGCAT CGCATTGGGTGTGCTGCTGGGCTATCCATTCGGTGGAATTCTGTATGACC TAATGGGCAAATCGGCGCCTTTTATCATTCTCTCCACTCTGATGTTCCTA AGTTTGGGCCTCCAGCTCCTGACCATGGATCTGACGGTGCAACCGGAGGT TGTGGTGGAGGATAGACCCAAGTGGCGATCGCTGCTCGAATGCAAAATGA TCCTGGCCATTGTGCTGGCCATTTGGTTTTCAACCTCAACAATGGCCATG CTGGAGCCCTGTCTGCCCATCTGGCTAATCCAGTATCTAAAGCCTAACAA GTGGCAGCTGGGCACCGTTTTCATTCCAGACTCTGTGGGCTACTTTGTGG GCACGAACTTCTTCGGCAGCATTGCCTACAAATATGGTCAGGTTAAGGTG TCCTGTATCAGTTTGTTGCTGGTGGGAGTAGCCTCTATTCTGATACCCAG TGCTACAACGGTGGCCCAACTATTGCTGCCCCATTTTGCCTTGGGACTGG GTATTGGAGTAATCGATGCCGCATTGGTTCCACTCTTGGCCACCTTTGTG GATGCAACACTGGCTCAGGAGGATCAGGGTGAGGGCAGCAGTTCCATGTC CAGCTACGGAACAGTCTATGCTATCCAGCAGACCTCTGTCAGTCTGGCTT ATTGCTTAGCTCCCCTGATTGGCGGGGAGTTGGCCCAGACCTTTGGATTT GCTTGGCTGATGCGCATTGTCGGCATTTTCAATATGATTTATGGCCCAAT ATTGGTCTACTTGCATCAGAAATACGATCCAAAGGCCCTTAGGGAACAGC ATAATGATATGCTGCTCCAAAGCAGCGGGCGGGGATCTAGGTATAAACAA CTTTACAACTCCATGGATGTGGAATAAGCTGTACTGCCCAGTTGTCCAGC AAAATAGCAAACAACCTTGAGTGTGCAAATAAGGCGTTCCTTTGGCTCAA TAAAGCAATATATCTGGAGCTGATTTTCGTAAACAATTTATTTTTCCGAT AAAATTCGAATCTCCTATTATTAAAATCACTTTGCCATGTCTTGAAGTAA CTTAGGTTATTATGATCAAATTTTCGGAATAAAAAGAATTACGTAATTAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10251-RB | 2192 | CG10251-RB | 45..2192 | 1..2148 | 10740 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19520640..19521242 | 1492..890 | 2955 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 19521460..19522033 | 890..317 | 2810 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 19519789..19520104 | 2148..1833 | 1580 | 100 | Minus |
chr3R | 27901430 | chr3R | 19522095..19522411 | 317..1 | 1540 | 99.1 | Minus |
chr3R | 27901430 | chr3R | 19520357..19520574 | 1709..1492 | 1075 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 19520168..19520296 | 1835..1707 | 645 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23697223..23697825 | 1492..890 | 3015 | 100 | Minus |
3R | 32079331 | 3R | 23698046..23698619 | 890..317 | 2870 | 100 | Minus |
3R | 32079331 | 3R | 23696370..23696687 | 2150..1833 | 1590 | 100 | Minus |
3R | 32079331 | 3R | 23698682..23698998 | 317..1 | 1585 | 100 | Minus |
3R | 32079331 | 3R | 23696940..23697157 | 1709..1492 | 1090 | 100 | Minus |
3R | 32079331 | 3R | 23696751..23696879 | 1835..1707 | 645 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23438054..23438656 | 1492..890 | 3015 | 100 | Minus |
3R | 31820162 | 3R | 23438877..23439450 | 890..317 | 2870 | 100 | Minus |
3R | 31820162 | 3R | 23437201..23437518 | 2150..1833 | 1590 | 100 | Minus |
3R | 31820162 | 3R | 23439513..23439829 | 317..1 | 1585 | 100 | Minus |
3R | 31820162 | 3R | 23437771..23437988 | 1709..1492 | 1090 | 100 | Minus |
3R | 31820162 | 3R | 23437582..23437710 | 1835..1707 | 645 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
roo | 9092 | roo DM_ROO 9092bp | 1050..1150 | 623..726 | 143 | 62.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2796..2854 | 691..750 | 135 | 71.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2289..2396 | 621..726 | 130 | 59.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2790..2816 | 700..726 | 117 | 92.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6754..6830 | 651..727 | 115 | 61 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2408 | 624..726 | 114 | 60.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19520169..19520293 | 1710..1834 | 100 | <- | Minus |
chr3R | 19520357..19520573 | 1493..1709 | 99 | <- | Minus |
chr3R | 19519789..19520102 | 1835..2148 | 100 | <- | Minus |
chr3R | 19520640..19521241 | 891..1492 | 99 | <- | Minus |
chr3R | 19521460..19522032 | 318..890 | 99 | <- | Minus |
chr3R | 19522095..19522411 | 1..317 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10251-RB | 1..1809 | 119..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10251-RB | 1..1809 | 119..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prt-RB | 1..1809 | 119..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10251-RB | 1..1809 | 119..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prt-RB | 1..1809 | 119..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10251-RB | 30..2167 | 1..2138 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10251-RB | 30..2167 | 1..2138 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prt-RB | 30..2177 | 1..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10251-RB | 30..2167 | 1..2138 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
prt-RB | 30..2177 | 1..2148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23696940..23697156 | 1493..1709 | 100 | <- | Minus |
3R | 23696372..23696685 | 1835..2148 | 100 | <- | Minus |
3R | 23696752..23696876 | 1710..1834 | 100 | <- | Minus |
3R | 23697223..23697824 | 891..1492 | 100 | <- | Minus |
3R | 23698046..23698618 | 318..890 | 100 | <- | Minus |
3R | 23698682..23698998 | 1..317 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23696940..23697156 | 1493..1709 | 100 | <- | Minus |
3R | 23696372..23696685 | 1835..2148 | 100 | <- | Minus |
3R | 23696752..23696876 | 1710..1834 | 100 | <- | Minus |
3R | 23697223..23697824 | 891..1492 | 100 | <- | Minus |
3R | 23698046..23698618 | 318..890 | 100 | <- | Minus |
3R | 23698682..23698998 | 1..317 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23696940..23697156 | 1493..1709 | 100 | <- | Minus |
3R | 23696372..23696685 | 1835..2148 | 100 | <- | Minus |
3R | 23696752..23696876 | 1710..1834 | 100 | <- | Minus |
3R | 23697223..23697824 | 891..1492 | 100 | <- | Minus |
3R | 23698046..23698618 | 318..890 | 100 | <- | Minus |
3R | 23698682..23698998 | 1..317 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19522094..19522407 | 1835..2148 | 100 | <- | Minus |
arm_3R | 19522474..19522598 | 1710..1834 | 100 | <- | Minus |
arm_3R | 19522662..19522878 | 1493..1709 | 100 | <- | Minus |
arm_3R | 19522945..19523546 | 891..1492 | 100 | <- | Minus |
arm_3R | 19523768..19524340 | 318..890 | 100 | <- | Minus |
arm_3R | 19524404..19524720 | 1..317 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23437771..23437987 | 1493..1709 | 100 | <- | Minus |
3R | 23437203..23437516 | 1835..2148 | 100 | <- | Minus |
3R | 23437583..23437707 | 1710..1834 | 100 | <- | Minus |
3R | 23438054..23438655 | 891..1492 | 100 | <- | Minus |
3R | 23438877..23439449 | 318..890 | 100 | <- | Minus |
3R | 23439513..23439829 | 1..317 | 100 | Minus |
Translation from 0 to 1926
> IP12904.hyp QHHHLLPLRIDTLGSILCGAYREPYGSLIWRYQCAVQLAMSEKSNRAQIH SNSRSKSQNQAAVQLNAPGRRSSTPSGANGSSNRCLIAVIVYLALLLDNM LLTVIVPILPDYLASLEADTSSAVVLSLEDTSSFSKLGYRSGESPGGGHP QLYISKHPIPGKSMVNFTLLQLSTEATTTTTSIATTTNSPHNSTSMQSPP KLTVGQSGGTNVTGIGHKSRNRKLASGHPPTHDNSSNDNSNKELTLTQEN GSIGLLLAMKALVQLIFNPIVGNASSKFGYRLPIVVGTFFLLLSSLVFTV GESYWALLVARAVQGVGSACINICGMSLVAQHYPEEARRSKVMGIILGSI ALGVLLGYPFGGILYDLMGKSAPFIILSTLMFLSLGLQLLTMDLTVQPEV VVEDRPKWRSLLECKMILAIVLAIWFSTSTMAMLEPCLPIWLIQYLKPNK WQLGTVFIPDSVGYFVGTNFFGSIAYKYGQVKVSCISLLLVGVASILIPS ATTVAQLLLPHFALGLGIGVIDAALVPLLATFVDATLAQEDQGEGSSSMS SYGTVYAIQQTSVSLAYCLAPLIGGELAQTFGFAWLMRIVGIFNMIYGPI LVYLHQKYDPKALREQHNDMLLQSSGRGSRYKQLYNSMDVE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
prt-PB | 602 | CG10251-PB | 1..602 | 40..641 | 3047 | 100 | Plus |
Vmat-PC | 610 | CG33528-PC | 202..577 | 216..604 | 701 | 34.7 | Plus |
Vmat-PE | 610 | CG33528-PE | 202..577 | 216..604 | 701 | 34.7 | Plus |
Vmat-PF | 610 | CG33528-PF | 202..577 | 216..604 | 701 | 34.7 | Plus |
Vmat-PD | 646 | CG33528-PD | 202..577 | 216..604 | 701 | 34.7 | Plus |
Translation from 1 to 1926
> IP12904.pep QHHHLLPLRIDTLGSILCGAYREPYGSLIWRYQCAVQLAMSEKSNRAQIH SNSRSKSQNQAAVQLNAPGRRSSTPSGANGSSNRCLIAVIVYLALLLDNM LLTVIVPILPDYLASLEADTSSAVVLSLEDTSSFSKLGYRSGESPGGGHP QLYISKHPIPGKSMVNFTLLQLSTEATTTTTSIATTTNSPHNSTSMQSPP KLTVGQSGGTNVTGIGHKSRNRKLASGHPPTHDNSSNDNSNKELTLTQEN GSIGLLLAMKALVQLIFNPIVGNASSKFGYRLPIVVGTFFLLLSSLVFTV GESYWALLVARAVQGVGSACINICGMSLVAQHYPEEARRSKVMGIILGSI ALGVLLGYPFGGILYDLMGKSAPFIILSTLMFLSLGLQLLTMDLTVQPEV VVEDRPKWRSLLECKMILAIVLAIWFSTSTMAMLEPCLPIWLIQYLKPNK WQLGTVFIPDSVGYFVGTNFFGSIAYKYGQVKVSCISLLLVGVASILIPS ATTVAQLLLPHFALGLGIGVIDAALVPLLATFVDATLAQEDQGEGSSSMS SYGTVYAIQQTSVSLAYCLAPLIGGELAQTFGFAWLMRIVGIFNMIYGPI LVYLHQKYDPKALREQHNDMLLQSSGRGSRYKQLYNSMDVE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18748-PA | 581 | GF18748-PA | 1..581 | 40..641 | 2241 | 78.5 | Plus |
Dana\GF11179-PA | 611 | GF11179-PA | 203..580 | 216..606 | 699 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12415-PA | 592 | GG12415-PA | 1..592 | 40..641 | 2530 | 86 | Plus |
Dere\GG22485-PA | 613 | GG22485-PA | 205..582 | 216..606 | 699 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13912-PA | 567 | GH13912-PA | 2..567 | 53..641 | 2061 | 73.3 | Plus |
Dgri\GH17299-PA | 619 | GH17299-PA | 221..588 | 229..606 | 712 | 35.5 | Plus |
Dgri\GH23496-PA | 573 | GH23496-PA | 73..480 | 229..641 | 521 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
prt-PB | 602 | CG10251-PB | 1..602 | 40..641 | 3047 | 100 | Plus |
Vmat-PC | 610 | CG33528-PC | 202..577 | 216..604 | 701 | 34.7 | Plus |
Vmat-PE | 610 | CG33528-PE | 202..577 | 216..604 | 701 | 34.7 | Plus |
Vmat-PF | 610 | CG33528-PF | 202..577 | 216..604 | 701 | 34.7 | Plus |
Vmat-PD | 646 | CG33528-PD | 202..577 | 216..604 | 701 | 34.7 | Plus |
VAChT-PA | 578 | CG32848-PA | 73..480 | 229..641 | 537 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24831-PA | 538 | GI24831-PA | 2..538 | 53..641 | 1831 | 64.5 | Plus |
Dmoj\GI21330-PA | 621 | GI21330-PA | 146..590 | 82..606 | 756 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13834-PA | 563 | GL13834-PA | 4..563 | 50..641 | 2049 | 76 | Plus |
Dper\GL17068-PA | 615 | GL17068-PA | 207..584 | 216..606 | 710 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10193-PB | 586 | GA10193-PB | 4..586 | 50..641 | 2263 | 80.8 | Plus |
Dpse\GA24351-PA | 616 | GA24351-PA | 208..585 | 216..606 | 710 | 35 | Plus |
Dpse\GA17179-PB | 581 | GA17179-PB | 73..480 | 229..641 | 538 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23549-PA | 491 | GM23549-PA | 219..491 | 343..641 | 1124 | 76.9 | Plus |
Dsec\GM23549-PA | 491 | GM23549-PA | 1..275 | 40..309 | 1063 | 89.2 | Plus |
Dsec\GM20272-PA | 578 | GM20272-PA | 205..413 | 216..426 | 377 | 37 | Plus |
Dsec\GM20272-PA | 578 | GM20272-PA | 404..521 | 488..614 | 170 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18364-PA | 571 | GD18364-PA | 1..571 | 40..628 | 2593 | 91.3 | Plus |
Dsim\GD25754-PA | 613 | GD25754-PA | 205..582 | 216..606 | 698 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24475-PA | 533 | GJ24475-PA | 2..533 | 53..641 | 1943 | 69.6 | Plus |
Dvir\GJ19675-PA | 614 | GJ19675-PA | 215..583 | 231..606 | 709 | 36 | Plus |
Dvir\GJ14407-PA | 562 | GJ14407-PA | 73..480 | 229..641 | 513 | 30.7 | Plus |