Clone IP13061 Report

Search the DGRC for IP13061

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:130
Well:61
Vector:pOT2
Associated Gene/TranscriptCG14077-RB
Protein status:IP13061.pep: gold
Preliminary Size:1884
Sequenced Size:3095

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14076 2005-01-01 Successful iPCR screen
CG14076 2008-04-29 Release 5.5 accounting
CG14076 2008-08-15 Release 5.9 accounting
CG14077 2008-08-15 Release 5.9 accounting
CG14076 2008-12-18 5.12 accounting
CG14077 2008-12-18 5.12 accounting

Clone Sequence Records

IP13061.complete Sequence

3095 bp (3095 high quality bases) assembled on 2005-04-11

GenBank Submission: BT022852.1

> IP13061.complete
ATCAGTTGGCATGTTGGGGAAATTGTAATTTAAAATTGTGTTTCGGAAAT
CTGTCTTTAAAATTATCTTTTAGTAAAAAAATGCGGCACTTACAATTAAT
GAAATATGTAAACCCACGGTTTGCAATCAACACGGTTATTACCCAACGCT
TAATGTCAAAGTCTGATGGAAAATCTTCTGGCACAGGATCAAAAGACGCG
AAGTGTAAAGGTACTAAAGATGCAAAATCTTCAAATGCAGCAAAGAAATC
TACTGAAGCAAAGGCCAAGGCTTCCGATGCGGCAAAGAAAGCGACACCGC
CTAAAGCGGCCAAGGAAACTAAAGTTACGCCGCCAAAGGACGAAACAGCC
ATAGCCGGAGGATCAAAATGCCCGCCAAAAGTCCAACCTGTTGCAGAAAC
TAGTAAAAATAAAAAGAAACTACAATCGTGTGATGAATTGCTACTAGGTA
AAAGTACTCGAAAGCAGAAGAAACCTCTAACAGCGATCCAAGGAGGGGAC
CTTGGCTGTCCTGGCCGGACTGGAAAGAAACCACAAATTGTTGCACAACA
CTCCAAGCTCTGGCAGAAAATCTCGCTCTTCGGAGTCCTGCCGATGATAG
CCATTCTCACCCTTTTGGTTTTTAGCACTCGATCGGAAGAGGAGCGTCTT
GAGTTTAAGAACTATGAGCATATGTACCGGCGGACGAAGCGATACTGGTT
TAAGGATGGAAACCGTACCGCTTTTCACAATAGTCACTTTAATGCTTTGC
CTCCAGCCGGATATGAGGACGAAGTGGACGAGAGTGGGATTGGACAGGAT
CCGGAGACGGACAAGGACAAGAAGGCTCGAATGAAAGAATTCGACAAGGT
CGTCAAGAATTGGCGCAAACACTCGTCTAAAAGGGATGCGCAGCTCAAAA
AGGAGGCAGCCGCTGCTGAAAAAGAGGCTAGAAAACAAGAAGCACAATAA
GCAATGCGGATTTTCGCCTTTGGAAGCTTTGGCAGCACTTCAACCTCAAC
AATTTCTATGTGCAGGTCAGCACGGAGAGCTCGCTGAGGGACCTGCAGCA
TGTCGATGCCCTGGATGAACATAAGGACGCTCCACCGCCGAAGAGTTTCC
ACGCCAACAACTCCACCCACTGGGAGACGTCCTTCCTGCTCCCCGCATTG
CCATACAAAATGGGCATCCTGCTGCTGGAGTTCAGCAGCGAGTGCGCCTT
AAATCTACTCCGCTGGTCTGCGGCCTCGGAACATAATTACTTCACCACCA
ACCGGTTCTGGCTGCTCCTCACCGAAGATCCAGGCGATATCGATTTACTC
GAGGATCCGGAAATATTCATTCCCCCGGATAGTGAGTTGCGGGTCCTTCA
TTATGAAAACGTTGGCAACTTCTCTTGCAGTTTAATCGATCTATACAAGG
TAGCTGCTTGGAAGCCTTTGAAAAGAACCTTGGTGGGGCACAACATTCGA
AATTCGCGGCACGTCATTCATGCCCTGCAGCACTTTGGTTCGGCCATAAC
TTATAGACAGGATCTGGAGGGCATAGTATTCAATTCGGCCATAGTAATTG
CCTTTCCGGATCTATTCACTAACATTGAAGATTTGTCGCTGAGGCATATT
GACACTATATCGAAGGTTAATCATCGCTTAATGCTGGAGCTGGCCAATAG
ATTGAATATGAGGATCGAACACTTTCCATTTCCAGCTACAATACCTACCA
AACAGTGAACTACGGATGGCGACAACCAAATGGATCATTCGATGGTCTCA
TGGGACGTTTTCAACGCTATGAACTGGACTTGGCCCAGCTGGCGATCTTC
ATGAGATTGGATCGTATTGCATTGGTCGATTTTGTGGCTGAGACTTATCG
AGTGAGAGCTGGGATCATGTTTCGGCAGCCACCTCTCTCGGCAGTGGCCA
ATATATTCGCTATGCCCTTTGAGAACGATGTGTGGGTGTCCATTTTGATG
CTACTGATCATCACGACCGTGGTCTTGGTTCTGGAACTCTTCTTTTCGCC
ACACAACCACGACATGTCCTACATGGATACACTAAATTTTGTTTGGGGTG
CTATGTGCCAGCAGGGTTTCTACGTAGAGGTGCGGAACCGATCGGCGAGA
ATCATTGTCTTCACCACATTTGTTGCAGCTCTCTTCTTGTTCACCTCGTT
TTCGGCCAATATTGTGGCCCTGCTGCAAAGTCCGTCGGATGCTATCCAGT
CATTGTCTGATCTGGGACAATCGCCTCTAGAAATCGGAGTTCAGGACACG
CAATATAATAAAATATACTTCACCGAGTCCACAGATCCCGTAACGAAGAA
TCTTTACCACAAAAAGATCGCGTCCAAAGGTGAAAATATCTATATGCGCC
CCTTGCTAGGAATGGAGAAAATGCGAACCGGCTTATTTGCATACCAGGTT
GAACTCCAGGCTGGTTACCAAATCGTCAGCGACACCTTCAGCGAGCCGGA
AAAGTGCGGATTAATGGAACTGGAGCCTTTTCAGCTGCCCATGCTAGCTA
TTCCAACAAGGAAAAACTTTCCTTACAAGGAGCTCATTCGAAGGCAACTA
CGCTGGCAGCGAGAAGTAAGCTTGGTGAATCGCGAGGAGCGAAAGTGGAT
TCCTCAGAAGCCCAAATGCGAGGGCGGAGTTGGCGGATTTGTCTCCATTG
GCATTACAGAATGCCGGTATGCTTTGGGGATCTTTGGGTGTGGAGCTGCT
GTCAGTTTTGTCCTGTTTCTTTTCGAGTTTATCTTCAGACACTTCAAACA
AGTTTATCGCATAATTAAAGGCTATAGAGAAGTGCAGCGCTAGGCTCCAC
GCGTTTAATCCAAACACACTTAAAACTTAGATGGGTATGGATAGCTCCCG
GACAACAGCACGCAGCACCTCAGGTGTCTTGAACTGCCAGTTCTGGATGT
TCTTGCTGACCCGACACCAGGACTCGCCGTGCGTGGGCTCTGCAGAAATG
CACCGATCGAGGACCTCCTGCTGCTGCGCCTCCGTGCCGTGGAGTAATTC
GAACTTGTAGAAATATGCCCAAGCATCACCTAGATCTGGATCGATCTTGA
CCTGAAATAAACAAATGATTAGCTCTGAAAAAAAAAAAAAAAAAA

IP13061.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:37:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14077-RB 3077 CG14077-RB 1..3077 1..3077 15385 100 Plus
Ir75d-RA 2168 Ir75d-RA 775..2168 1684..3077 6970 100 Plus
Ir75d-RA 2168 Ir75d-RA 69..776 955..1662 3540 100 Plus
CG6841.a 3326 CG6841.a 2625..3129 3051..2547 2525 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:43:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 18898655..18899540 2546..1661 4385 99.7 Minus
chr3L 24539361 chr3L 18899611..18900318 1663..956 3540 100 Minus
chr3L 24539361 chr3L 18897891..18898421 3077..2547 2595 99.2 Minus
chr3L 24539361 chr3L 18902664..18903085 956..535 2110 100 Minus
chr3L 24539361 chr3L 18903137..18903381 534..290 1225 100 Minus
chr3L 24539361 chr3L 18903593..18903787 195..1 975 100 Minus
chr3L 24539361 chr3L 18903443..18903540 291..194 490 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:18:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:43:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18909024..18909909 2546..1661 4430 100 Minus
3L 28110227 3L 18909980..18910687 1663..956 3540 100 Minus
3L 28110227 3L 18908258..18908790 3079..2547 2665 100 Minus
3L 28110227 3L 18913027..18913448 956..535 2110 100 Minus
3L 28110227 3L 18913500..18913744 534..290 1225 100 Minus
3L 28110227 3L 18913956..18914150 195..1 975 100 Minus
3L 28110227 3L 18913806..18913903 291..194 490 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:27:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 18902124..18903009 2546..1661 4430 100 Minus
3L 28103327 3L 18903080..18903787 1663..956 3540 100 Minus
3L 28103327 3L 18901358..18901890 3079..2547 2665 100 Minus
3L 28103327 3L 18906127..18906548 956..535 2110 100 Minus
3L 28103327 3L 18906600..18906844 534..290 1225 100 Minus
3L 28103327 3L 18907056..18907250 195..1 975 100 Minus
3L 28103327 3L 18906906..18907003 291..194 490 100 Minus
Blast to na_te.dros performed on 2019-03-15 20:43:09 has no hits.

IP13061.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:43:50 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 18897891..18898421 2547..3077 99 <- Minus
chr3L 18898655..18899538 1663..2546 99 <- Minus
chr3L 18899612..18900317 957..1662 100 <- Minus
chr3L 18902664..18903085 535..956 100 <- Minus
chr3L 18903137..18903379 292..534 100 <- Minus
chr3L 18903443..18903538 196..291 100 <- Minus
chr3L 18903593..18903787 1..195 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:54:16 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG14076-RA 66..769 952..1655 99 == Plus
CG14076-RA 770..1884 1678..2793 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:02:50 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
Ir75d-RA 66..769 952..1655 99 == Plus
Ir75d-RA 770..1884 1678..2793 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:10:40 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
Ir75d-RC 210..913 952..1655 99 == Plus
Ir75d-RC 914..2028 1678..2793 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:46:58 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG14076-RA 66..769 952..1655 99 == Plus
CG14076-RA 770..1884 1678..2793 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:42:12 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
Ir75d-RC 210..913 952..1655 99 == Plus
Ir75d-RC 914..2028 1678..2793 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:48:02 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG14077-RB 1..3077 1..3077 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:02:49 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG14077-RB 1..3077 1..3077 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:10:40 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG14077-RB 1..3077 1..3077 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:46:59 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG14077-RB 1..3077 1..3077 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:42:12 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
CG14077-RB 1..3077 1..3077 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:43:50 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18908260..18908790 2547..3077 100 <- Minus
3L 18909024..18909907 1663..2546 100 <- Minus
3L 18909981..18910686 957..1662 100 <- Minus
3L 18913027..18913448 535..956 100 <- Minus
3L 18913500..18913742 292..534 100 <- Minus
3L 18913806..18913901 196..291 100 <- Minus
3L 18913956..18914150 1..195 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:43:50 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18908260..18908790 2547..3077 100 <- Minus
3L 18909024..18909907 1663..2546 100 <- Minus
3L 18909981..18910686 957..1662 100 <- Minus
3L 18913027..18913448 535..956 100 <- Minus
3L 18913500..18913742 292..534 100 <- Minus
3L 18913806..18913901 196..291 100 <- Minus
3L 18913956..18914150 1..195 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:43:50 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18908260..18908790 2547..3077 100 <- Minus
3L 18909024..18909907 1663..2546 100 <- Minus
3L 18909981..18910686 957..1662 100 <- Minus
3L 18913027..18913448 535..956 100 <- Minus
3L 18913500..18913742 292..534 100 <- Minus
3L 18913806..18913901 196..291 100 <- Minus
3L 18913956..18914150 1..195 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:10:40 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18901360..18901890 2547..3077 100 <- Minus
arm_3L 18902124..18903007 1663..2546 100 <- Minus
arm_3L 18903081..18903786 957..1662 100 <- Minus
arm_3L 18906127..18906548 535..956 100 <- Minus
arm_3L 18906600..18906842 292..534 100 <- Minus
arm_3L 18906906..18907001 196..291 100 <- Minus
arm_3L 18907056..18907250 1..195 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:22:33 Download gff for IP13061.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18901360..18901890 2547..3077 100 <- Minus
3L 18902124..18903007 1663..2546 100 <- Minus
3L 18903081..18903786 957..1662 100 <- Minus
3L 18906127..18906548 535..956 100 <- Minus
3L 18906600..18906842 292..534 100 <- Minus
3L 18906906..18907001 196..291 100 <- Minus
3L 18907056..18907250 1..195 100   Minus

IP13061.pep Sequence

Translation from 80 to 949

> IP13061.pep
MRHLQLMKYVNPRFAINTVITQRLMSKSDGKSSGTGSKDAKCKGTKDAKS
SNAAKKSTEAKAKASDAAKKATPPKAAKETKVTPPKDETAIAGGSKCPPK
VQPVAETSKNKKKLQSCDELLLGKSTRKQKKPLTAIQGGDLGCPGRTGKK
PQIVAQHSKLWQKISLFGVLPMIAILTLLVFSTRSEEERLEFKNYEHMYR
RTKRYWFKDGNRTAFHNSHFNALPPAGYEDEVDESGIGQDPETDKDKKAR
MKEFDKVVKNWRKHSSKRDAQLKKEAAAAEKEARKQEAQ*

IP13061.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:08:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11548-PA 97 GF11548-PA 21..85 160..224 152 43.1 Plus
Dana\GF13063-PA 109 GF13063-PA 27..108 153..229 138 36.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:08:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13442-PA 262 GG13442-PA 1..262 25..289 1160 88.3 Plus
Dere\GG20553-PA 94 GG20553-PA 8..92 146..234 175 42.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:08:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15371-PA 323 GH15371-PA 6..263 55..289 397 38.5 Plus
Dgri\GH21206-PA 109 GH21206-PA 27..109 153..230 141 36.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14077-PB 289 CG14077-PB 1..289 1..289 1497 100 Plus
CG14077-PC 289 CG14077-PC 1..289 1..289 1497 100 Plus
COX6AL-PA 94 CG30093-PA 14..92 155..234 168 43.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12974-PA 218 GI12974-PA 1..129 160..289 357 53.1 Plus
Dmoj\GI20495-PA 109 GI20495-PA 27..108 153..229 146 38.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19036-PA 149 GL19036-PA 3..149 125..280 456 59.4 Plus
Dper\GL19037-PA 226 GL19037-PA 13..182 116..280 447 53.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25317-PA 221 GA25317-PA 28..221 73..280 515 55.2 Plus
Dpse\GA25318-PA 226 GA25318-PA 13..182 116..280 443 53.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14911-PA 256 GM14911-PA 3..256 31..289 1121 91.1 Plus
Dsec\GM21645-PA 94 GM21645-PA 14..92 155..234 172 42.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\CoVIa-PA 260 GD12318-PA 1..260 25..289 1157 92.5 Plus
Dsim\GD11145-PA 94 GD11145-PA 14..92 155..234 176 43.8 Plus
Dsim\GD15452-PA 109 GD15452-PA 27..108 153..229 144 37.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13119-PA 311 GJ13119-PA 16..240 69..287 472 50.2 Plus
Dvir\GJ22345-PA 109 GJ22345-PA 27..108 153..229 144 37.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:09:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18134-PA 388 GK18134-PA 201..311 155..265 308 55.9 Plus
Dwil\GK22192-PA 96 GK22192-PA 23..96 158..231 141 41.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:09:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22540-PA 262 GE22540-PA 1..262 25..289 1132 89.1 Plus
Dyak\GE22798-PA 262 GE22798-PA 1..262 25..289 1129 89.1 Plus
Dyak\GE11738-PA 94 GE11738-PA 14..92 155..234 173 43.8 Plus
Dyak\GE14301-PA 109 GE14301-PA 27..108 153..229 139 36.1 Plus

IP13061.hyp Sequence

Translation from 1749 to 2792

> IP13061.hyp
MGRFQRYELDLAQLAIFMRLDRIALVDFVAETYRVRAGIMFRQPPLSAVA
NIFAMPFENDVWVSILMLLIITTVVLVLELFFSPHNHDMSYMDTLNFVWG
AMCQQGFYVEVRNRSARIIVFTTFVAALFLFTSFSANIVALLQSPSDAIQ
SLSDLGQSPLEIGVQDTQYNKIYFTESTDPVTKNLYHKKIASKGENIYMR
PLLGMEKMRTGLFAYQVELQAGYQIVSDTFSEPEKCGLMELEPFQLPMLA
IPTRKNFPYKELIRRQLRWQREVSLVNREERKWIPQKPKCEGGVGGFVSI
GITECRYALGIFGCGAAVSFVLFLFEFIFRHFKQVYRIIKGYREVQR*

IP13061.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:38:13
Subject Length Description Subject Range Query Range Score Percent Strand
Ir75d-PC 675 CG14076-PC 329..675 1..347 1791 100 Plus
Ir84a-PB 644 CG10101-PB 296..636 1..337 283 27.5 Plus
Ir31a-PC 648 CG31718-PC 280..640 1..332 255 23.4 Plus
Ir31a-PD 629 CG31718-PD 280..600 1..291 237 23.9 Plus
Ir64a-PA 859 CG10633-PA 563..804 91..290 234 28.5 Plus