Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
IP13064.complete Sequence
1914 bp (1914 high quality bases) assembled on 2005-04-11
GenBank Submission: BT022853
> IP13064.complete
ATTTAAATTTTATTCCGTAGCTAGATATTCAGCTTAAACCATGTTGCACT
GCCAAGTGGAAGGGGCAAAAGCAGAGCAACGTGAGTGTCCTGTGATGCAC
TCAGAGAATTCTGCGGAAACTTTCAGTTCGGAGGAATCCCAAGCCAGTGA
CTGTAACCAGCCGTTGGATGTTCAAAGTCCAAAGCTGACAACAAACATAG
AAGAGTCCTTTAAGGTGGACTGTAAGCTTTCGCTGAATACTCTTCTGTCA
CCTATTAATATCACCGATCCATTGCTCATGTGTTCTATATCAGAGTTTAA
CAAAGAGGAACAAACTATGGAGCCGTATTTTATTCAGGAATTAGATATGG
CTTGTGCTGGCCAAGAAGTTGAGCAAGTTGCGGAGGAAAATGTATTCGAA
ACTGGACCACAGTTGAAGCTACCGGAAAATCAACCTATCAACGATTCGAT
AACAACAGAAACTAATGAAACGAAGTTACCGTCAACGGAAGCACTAAATG
TTTTAAATTTAGCAGAATTCAGTGAACCAGTAATGGAAAAATCAAATATA
TCCATTGAAGAAGTCAATCTTACAGGAGCCGAAGAAATAAATGAACCCAT
AAGTGATGAACCAAATAGTCAACTAGTTGAAAGTGCTGCCAAACTACAGC
CAAAATCACTTGGAATTCAAATACCTCCTCTACAGATCGAAGATTTGATT
TCTCCATTAGTAGAACAACCGAAGATAGCAACTAAACTGGGTGTTATTAG
TTTCTTGACAGGAAACAAGTTGGCTTTAACGCCCAGTGTAAGGCTCTCTT
TTGGTGATAGAGTAACGACCAGGACAAACAAAAAATCCAAGGAAATTGTT
CAACAGCAAGCTTCTAAAGCACTAAAGGCGTTAATTTCAGTTTTCACAAT
GCAGCGAAGGCTAGAGGCATCACAGTGTGATAATTCCAATAATAGCCGAT
CGAAACGATTTGAACAACTAAAAAGCTCTTTAACCTTTTCACGAGTATTT
AGGCAGAACATCTTTCAGCCAACTTCGAAGATAGAAAGCCGCCAGCAGAA
TACTGATGCTAACTCACTGGAGTCTGGGGAACCCAATTTTAAAAGTACAA
GCGCATACAAAGAACCACTACCCATACCCTACCGACAAGATGCTGGCGAA
GGACTAACTTGTAATGGCTTGAACGTAAGCAAGGATTCAGTTTTTAGTGA
GGTTTCCGAAAGTGATGTATCGGAGACGCACAATAAGTTATTTGCGATGA
AAAAAACACAGGAGGGGCTTAGTTCGACCAGATCGATTGGCGAACTAAGT
AACATTCTGAACAATGGTAGGGTATTGTTCAGCCAGCCCGTTAGACTTTT
CTGTTTTAACAAATTGAAGGAGTGGAAACGGCAAGGTAAAGTACCACGTT
TCCATGAGAGTCCTTACCGTTCCCCCTCCTTCTCAGGCGAGGGTCAAATC
GAGGTGATCGAGCACCACGGATCATACTACATAGTACTCCATGACAAGGT
CAGCGGGGAGCTCATCATCCACATGCGGGTGGACGAGAAGTGGCGCATCG
ACTACATGACCAAGAGTTCCTATAGCTGCCGTTGGACCAACATCAACTAC
GCCAACTGCCGCGATGGCACCCTGGAGAGGATCGCCTGCTCCTTCCGTGA
ACCCAGCCACGCTGCTGAGTTTGTCGCCCGGATCCGGAATAGTGCACTCC
AATCACGCCTCGAATGCAGTTCCTAATTTGTAATGATTTCTTTTCAATGC
CTTCTAGTTGATTTCCTTGGAAATTCCTTGGCGTTTCTCGCATTCGAGAG
CGTGTTTAAGCTGGCCATAAATTATTGTGCGATCTTTGAATATATTTTGT
AAATATTGCGATTTGAATATTAAAAAATTATAGCTAAAAACAAAAAAAAA
AAAAAAAAAAAAAA
IP13064.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:37:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14128-RE | 1898 | CG14128-RE | 8..1898 | 1..1891 | 9455 | 100 | Plus |
CG14128-RC | 1847 | CG14128-RC | 8..1393 | 1..1386 | 6930 | 100 | Plus |
CG14128-RB | 1901 | CG14128-RB | 337..1447 | 276..1386 | 5555 | 100 | Plus |
CG14128-RC | 1847 | CG14128-RC | 1391..1847 | 1435..1891 | 2285 | 100 | Plus |
CG14128-RB | 1901 | CG14128-RB | 1445..1901 | 1435..1891 | 2285 | 100 | Plus |
CG14128-RB | 1901 | CG14128-RB | 8..282 | 1..275 | 1375 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:44:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 11871016..11871978 | 929..1891 | 4740 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 11870306..11870963 | 276..933 | 3275 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 11869977..11870251 | 1..275 | 1360 | 99.6 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:18:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:44:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11880220..11881185 | 929..1894 | 4830 | 100 | Plus |
3L | 28110227 | 3L | 11879510..11880167 | 276..933 | 3275 | 99.8 | Plus |
3L | 28110227 | 3L | 11879181..11879455 | 1..275 | 1375 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:27:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 11873320..11874285 | 929..1894 | 4830 | 100 | Plus |
3L | 28103327 | 3L | 11872610..11873267 | 276..933 | 3275 | 99.8 | Plus |
3L | 28103327 | 3L | 11872281..11872555 | 1..275 | 1375 | 100 | Plus |
Blast to na_te.dros performed 2019-03-15 20:44:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 9551..9613 | 1855..1787 | 115 | 68.1 | Minus |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 1034..1096 | 1855..1787 | 115 | 68.1 | Minus |
IP13064.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:45:11 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 11869991..11870251 | 15..275 | 99 | -> | Plus |
chr3L | 11870306..11870959 | 276..929 | 100 | -> | Plus |
chr3L | 11871017..11871978 | 930..1891 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:54:17 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14128-RA | 1..235 | 41..275 | 100 | -> | Plus |
CG14128-RA | 290..1740 | 276..1726 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:02:38 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14128-RE | 1..1686 | 41..1726 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:10:55 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14128-RE | 1..1686 | 41..1726 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:46:30 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14128-RA | 1..235 | 41..275 | 100 | -> | Plus |
CG14128-RA | 290..1740 | 276..1726 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:42:32 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14128-RE | 1..1686 | 41..1726 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:47:41 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14128-RA | 1..235 | 41..275 | 100 | -> | Plus |
CG14128-RA | 290..1740 | 276..1726 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:02:38 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14128-RE | 8..1898 | 1..1891 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:10:55 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14128-RE | 8..1898 | 1..1891 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:46:30 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14128-RA | 1..235 | 41..275 | 100 | -> | Plus |
CG14128-RA | 290..1740 | 276..1726 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:42:32 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14128-RE | 8..1898 | 1..1891 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:45:11 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11879181..11879455 | 1..275 | 100 | -> | Plus |
3L | 11879510..11880163 | 276..929 | 100 | -> | Plus |
3L | 11880221..11881182 | 930..1891 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:45:11 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11879181..11879455 | 1..275 | 100 | -> | Plus |
3L | 11879510..11880163 | 276..929 | 100 | -> | Plus |
3L | 11880221..11881182 | 930..1891 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:45:11 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11879181..11879455 | 1..275 | 100 | -> | Plus |
3L | 11879510..11880163 | 276..929 | 100 | -> | Plus |
3L | 11880221..11881182 | 930..1891 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:10:55 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11872281..11872555 | 1..275 | 100 | -> | Plus |
arm_3L | 11872610..11873263 | 276..929 | 100 | -> | Plus |
arm_3L | 11873321..11874282 | 930..1891 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:22:21 Download gff for
IP13064.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11872281..11872555 | 1..275 | 100 | -> | Plus |
3L | 11872610..11873263 | 276..929 | 100 | -> | Plus |
3L | 11873321..11874282 | 930..1891 | 100 | | Plus |
IP13064.pep Sequence
Translation from 40 to 1725
> IP13064.pep
MLHCQVEGAKAEQRECPVMHSENSAETFSSEESQASDCNQPLDVQSPKLT
TNIEESFKVDCKLSLNTLLSPINITDPLLMCSISEFNKEEQTMEPYFIQE
LDMACAGQEVEQVAEENVFETGPQLKLPENQPINDSITTETNETKLPSTE
ALNVLNLAEFSEPVMEKSNISIEEVNLTGAEEINEPISDEPNSQLVESAA
KLQPKSLGIQIPPLQIEDLISPLVEQPKIATKLGVISFLTGNKLALTPSV
RLSFGDRVTTRTNKKSKEIVQQQASKALKALISVFTMQRRLEASQCDNSN
NSRSKRFEQLKSSLTFSRVFRQNIFQPTSKIESRQQNTDANSLESGEPNF
KSTSAYKEPLPIPYRQDAGEGLTCNGLNVSKDSVFSEVSESDVSETHNKL
FAMKKTQEGLSSTRSIGELSNILNNGRVLFSQPVRLFCFNKLKEWKRQGK
VPRFHESPYRSPSFSGEGQIEVIEHHGSYYIVLHDKVSGELIIHMRVDEK
WRIDYMTKSSYSCRWTNINYANCRDGTLERIACSFREPSHAAEFVARIRN
SALQSRLECSS*
IP13064.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:18:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF25299-PA | 648 | GF25299-PA | 121..648 | 84..558 | 736 | 37.4 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:18:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG15538-PA | 582 | GG15538-PA | 1..581 | 1..556 | 2134 | 71.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sprn-PE | 561 | CG14128-PE | 1..561 | 1..561 | 2869 | 100 | Plus |
Sprn-PF | 579 | CG14128-PF | 1..579 | 1..561 | 2837 | 96.7 | Plus |
Sprn-PC | 544 | CG14128-PC | 1..544 | 1..561 | 2747 | 97 | Plus |
Sprn-PB | 562 | CG14128-PB | 1..562 | 1..561 | 2715 | 93.8 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:18:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI11506-PA | 315 | GI11506-PA | 222..309 | 465..550 | 221 | 47.7 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:18:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM25305-PA | 576 | GM25305-PA | 1..576 | 1..561 | 2527 | 84.6 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:18:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD14336-PA | 576 | GD14336-PA | 1..576 | 1..561 | 2444 | 82 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:18:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK25233-PA | 112 | GK25233-PA | 11..93 | 466..545 | 215 | 45.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:18:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE21860-PA | 573 | GE21860-PA | 1..572 | 1..560 | 1999 | 67.3 | Plus |
IP13064.hyp Sequence
Translation from 40 to 1725
> IP13064.hyp
MLHCQVEGAKAEQRECPVMHSENSAETFSSEESQASDCNQPLDVQSPKLT
TNIEESFKVDCKLSLNTLLSPINITDPLLMCSISEFNKEEQTMEPYFIQE
LDMACAGQEVEQVAEENVFETGPQLKLPENQPINDSITTETNETKLPSTE
ALNVLNLAEFSEPVMEKSNISIEEVNLTGAEEINEPISDEPNSQLVESAA
KLQPKSLGIQIPPLQIEDLISPLVEQPKIATKLGVISFLTGNKLALTPSV
RLSFGDRVTTRTNKKSKEIVQQQASKALKALISVFTMQRRLEASQCDNSN
NSRSKRFEQLKSSLTFSRVFRQNIFQPTSKIESRQQNTDANSLESGEPNF
KSTSAYKEPLPIPYRQDAGEGLTCNGLNVSKDSVFSEVSESDVSETHNKL
FAMKKTQEGLSSTRSIGELSNILNNGRVLFSQPVRLFCFNKLKEWKRQGK
VPRFHESPYRSPSFSGEGQIEVIEHHGSYYIVLHDKVSGELIIHMRVDEK
WRIDYMTKSSYSCRWTNINYANCRDGTLERIACSFREPSHAAEFVARIRN
SALQSRLECSS*
IP13064.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:54:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14128-PE | 561 | CG14128-PE | 1..561 | 1..561 | 2869 | 100 | Plus |
CG14128-PF | 579 | CG14128-PF | 1..579 | 1..561 | 2837 | 96.7 | Plus |
CG14128-PC | 544 | CG14128-PC | 1..544 | 1..561 | 2747 | 97 | Plus |
CG14128-PB | 562 | CG14128-PB | 1..562 | 1..561 | 2715 | 93.8 | Plus |