Clone IP13102 Report

Search the DGRC for IP13102

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:131
Well:2
Vector:pOT2
Associated Gene/TranscriptCG10164-RA
Protein status:IP13102.pep: gold
Preliminary Size:2059
Sequenced Size:1914

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10164 2005-01-01 Successful iPCR screen
CG10164 2008-04-29 Release 5.5 accounting
CG10164 2008-04-29 Picked prior to 5.5
CG10164 2008-08-15 Release 5.9 accounting
CG10164 2008-12-18 5.12 accounting

Clone Sequence Records

IP13102.complete Sequence

1914 bp assembled on 2007-09-17

GenBank Submission: BT030843

> IP13102.complete
AAGACACTCCCACACCAGCTGTGTGTATGCGGTTTAGTTGGCCAACCGCA
AAATTCTTGGCAAACAAAATAAAGAAAACTAACTTGGGCCGAAGCAGAGC
AGATCCAAGCGGCAACGGAAATTGTTAACCTTTGGGGATATCAAACATTT
ACGATTGCGTGGCAGCGGCAGCAACATTTAAGTTTTTATCAGCACAAAAT
AAAGTTTTGGTTTACGGATTGTGTTCCTGTCCGCCAACGCTCCTCCTACT
ATCCACCACTTTTTGGCCAGAGGCAGCTACAAGTGCCCAGGAGCCAAGAC
AGGAGCAAAATTCAGGAGCAGAAGCTGGATCAGGGGCTGAAGGTTCGTCC
CTGTTGATTCTGGGGCACGCAAAACTTTTATCCTTTTCAATTTCGTTTTT
CTTCGCCGAGTACTTTTGAGGGATTTAAATTTCTGTTTGCAGCCGAGCCA
ACAGCGAAACAACAACCGTGGGAGTGGCAGCATCGAGTTCGTGGCGACCA
GCCGTCATGAAGAAGAAGAGTCGTAGAGATCGGACACCAAAAGTAGAACA
ACCTGAACCATCGAGAGTTGTCAACACGGAGCCTATTCGACTGAACGTGG
AACCCCAATCCCAAGAGATAGATGACCAGGCTGCACCATTTATTTTGGTA
GACTGTGCGAAATATGAGGATCGTTCAGATTTGGAAGCAATGCTTAGTTC
CATAGAAAAGGAACGGATGAAAAAGGTTCAGGCAGATATAGAGCAGCAAT
ATTTTCCCCTCCTGGAGGATGAAGAACCACCTCCAGAATTAGATATGCCT
ATAAACCTAAGCTCTCAAGCATTGGCTGTACTGAATGATGCAGATAATGA
GCGCCGCTTTAAAGAGGATCTGGAGAGCCTTAGTATTGCTGGACTGGAAG
AGAAAGATACATCCATTAGCATTACCAACATGAAAATAGAAGACAGCAAA
CTATTGTTTCGGACTATGCCAGGTATGAATCAGATTTGCTGCACGCTAGA
GCAGATGAAAAATGTTCATGGGAAAATTGGACCAGCAGAACCAACTCCAC
AGGCACGTTGCACCAGCTTGATTCCACTTTCAGGCCTTCGCCGGCAAGAC
ACCTTCGAAATTAAACGTAAAAAGAACCAAAAGATTAGATATCCCGAGGT
TTCCACCAAATCAGCAATTAGCGAAAGGAAACATCTACCATTAATTGCCA
AGGGAGGAAAATGTGAGAAAGTTATCTCAGAGACTGATAAGATTTTCAGC
CAGATTGGCGATCTTCTCGTGAAACTGCAGCTCCAACACGAGGGCAGCAA
AGTCCTGAACAAGGGATCCTCTTATTCCTACATGGTGAACATTAAGCCAG
CTGGAGGTGCATCCAATTGTTCAGTTTATGCGCTTACAAAACTCAAATCG
CACGAAGTAGAGGAGACGCATGCCGAAAATCTAAGAACTTCTCACGCTCC
ATTGATCAACATTTTATACCCTGGTCGTGGTGGACTTATGGAGACTTCTG
AGTTGTCCACGACCGCACGATGTATCGATGGAAGCTCCATTGGGTCGATG
TCCCTTCGCGAAACGCCGTCCTCCAAGATCAAACCATCATTTTTACGCAA
AAGGCCCAGTTCCCATCTAAGGGCACCTAACCCTGTCAAATTTTGCCACG
GCAGGAAGAAAAATTAGGCCGCTTGGTAACCATTCCGCAAATTATTTGTT
CGAAAGCCATTTATTTTCTATCGACATTGGAATCTCCAAATAATGCTTAC
AAATTCATATGTTGGTCATTCAAAAGGATCTTGAATGGATATTTTATGCA
AAAATATATCAGTTGCCAGAGTCTAATGAACGGTAATAATTCAACAAATG
CATACAATGCGGCCATAATATAAAATATTAAGTGATACAAAACAAAAAAA
AAAAAAAAAAAAAA

IP13102.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:37:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG10164-RA 1959 CG10164-RA 41..1936 1..1896 9480 100 Plus
CG10164.b 2464 CG10164.b 274..2169 1..1896 9480 100 Plus
CG10164.a 2192 CG10164.a 274..2169 1..1896 9480 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:11:17
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19377994..19379388 1893..499 6915 99.7 Minus
chr3R 27901430 chr3R 19379606..19380105 501..1 2395 99 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:18:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:11:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23554618..23556015 1896..499 6990 100 Minus
3R 32079331 3R 23556233..23556733 501..1 2505 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:34:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 23295449..23296846 1896..499 6990 100 Minus
3R 31820162 3R 23297064..23297564 501..1 2505 100 Minus
Blast to na_te.dros performed on 2019-03-15 15:11:16 has no hits.

IP13102.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:12:07 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19377994..19379385 502..1893 99 <- Minus
chr3R 19379606..19380105 1..501 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:54:20 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
CG10164-RA 1..1161 507..1667 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:07:56 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
CG10164-RB 1..1161 507..1667 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:06:15 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
CG10164-RA 1..1161 507..1667 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:54:28 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
CG10164-RA 1..1161 507..1667 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:30:30 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
CG10164-RA 1..1161 507..1667 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:05:04 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
CG10164-RA 43..1935 1..1893 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:07:56 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
CG10164-RB 41..1933 1..1893 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:06:15 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
CG10164-RA 41..1933 1..1893 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:54:28 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
CG10164-RA 43..1935 1..1893 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:30:30 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
CG10164-RA 41..1933 1..1893 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:12:07 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23554621..23556012 502..1893 100 <- Minus
3R 23556233..23556733 1..501 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:12:07 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23554621..23556012 502..1893 100 <- Minus
3R 23556233..23556733 1..501 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:12:07 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23554621..23556012 502..1893 100 <- Minus
3R 23556233..23556733 1..501 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:06:15 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19380343..19381734 502..1893 100 <- Minus
arm_3R 19381955..19382455 1..501 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:00:13 Download gff for IP13102.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23295452..23296843 502..1893 100 <- Minus
3R 23297064..23297564 1..501 100   Minus

IP13102.hyp Sequence

Translation from 506 to 1666

> IP13102.hyp
MKKKSRRDRTPKVEQPEPSRVVNTEPIRLNVEPQSQEIDDQAAPFILVDC
AKYEDRSDLEAMLSSIEKERMKKVQADIEQQYFPLLEDEEPPPELDMPIN
LSSQALAVLNDADNERRFKEDLESLSIAGLEEKDTSISITNMKIEDSKLL
FRTMPGMNQICCTLEQMKNVHGKIGPAEPTPQARCTSLIPLSGLRRQDTF
EIKRKKNQKIRYPEVSTKSAISERKHLPLIAKGGKCEKVISETDKIFSQI
GDLLVKLQLQHEGSKVLNKGSSYSYMVNIKPAGGASNCSVYALTKLKSHE
VEETHAENLRTSHAPLINILYPGRGGLMETSELSTTARCIDGSSIGSMSL
RETPSSKIKPSFLRKRPSSHLRAPNPVKFCHGRKKN*

IP13102.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:55:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG10164-PB 386 CG10164-PB 1..386 1..386 1975 100 Plus
CG10164-PA 386 CG10164-PA 1..386 1..386 1975 100 Plus

IP13102.pep Sequence

Translation from 506 to 1666

> IP13102.pep
MKKKSRRDRTPKVEQPEPSRVVNTEPIRLNVEPQSQEIDDQAAPFILVDC
AKYEDRSDLEAMLSSIEKERMKKVQADIEQQYFPLLEDEEPPPELDMPIN
LSSQALAVLNDADNERRFKEDLESLSIAGLEEKDTSISITNMKIEDSKLL
FRTMPGMNQICCTLEQMKNVHGKIGPAEPTPQARCTSLIPLSGLRRQDTF
EIKRKKNQKIRYPEVSTKSAISERKHLPLIAKGGKCEKVISETDKIFSQI
GDLLVKLQLQHEGSKVLNKGSSYSYMVNIKPAGGASNCSVYALTKLKSHE
VEETHAENLRTSHAPLINILYPGRGGLMETSELSTTARCIDGSSIGSMSL
RETPSSKIKPSFLRKRPSSHLRAPNPVKFCHGRKKN*

IP13102.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:59:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19951-PA 446 GF19951-PA 35..446 30..386 498 35.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:59:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12423-PA 401 GG12423-PA 4..401 2..386 1392 68.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG10164-PB 386 CG10164-PB 1..386 1..386 1975 100 Plus
CG10164-PA 386 CG10164-PA 1..386 1..386 1975 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:59:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23557-PA 355 GM23557-PA 1..355 1..386 1464 75.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:59:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18374-PA 355 GD18374-PA 1..355 1..386 1444 74.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:59:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13414-PA 455 GK13414-PA 48..338 42..288 153 23.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:59:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23945-PA 401 GE23945-PA 4..401 2..386 1301 65.6 Plus