Clone IP13133 Report

Search the DGRC for IP13133

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:131
Well:33
Vector:pOT2
Associated Gene/TranscriptCG12594-RA
Protein status:IP13133.pep: gold
Preliminary Size:2061
Sequenced Size:3311

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12594 2005-01-01 Successful iPCR screen
CG12594 2008-04-29 Release 5.5 accounting
CG12594 2008-08-15 Release 5.9 accounting
CG12594 2008-12-18 5.12 accounting

Clone Sequence Records

IP13133.complete Sequence

3311 bp (3311 high quality bases) assembled on 2005-04-11

GenBank Submission: BT022856

> IP13133.complete
CCAGTCCGGAAAATTTCACAAAGCGGAAATACTTGGAAAACCATACTTGG
TTTAACTTCAAACTCGAACTCGCTTGTTGATATTACGGCAAAGCTATAAA
AACTGTAATTAGTTTGCGCTTGTGGGTTCGCAAAATTTAATCAGCCAGCC
ATGTGGTGAAAAGTGGGAAATAAATAAACAAACCCTTCGCAAGTGCATAA
TTACAATGCTAACGAACAAAAGAAACAATATAAACGAAATGCCAATACCG
AATAGTTAGTCCAACAAAGTGACCACAAAGCAATCTAGTTTGCGTTGCCA
ATATAAATCAAATTGAAATCAGATTACAAGCTTAAATAGTTCAATGATTT
GGCTTTCGTCGGACGAACAATGGTCACTAGTTATTTGAAGTGAGAAATTT
ATGCAAAACATCGCAAAATCTAAAATGTATAATTACATTTAACGAATCAA
CGTGTTTTTATTAAGTGAACCAGTATTAAATAAAATAAATAATTATAATC
CGCAGTGTTTGTCTAATAAAAAAAAAAGAAGTGATTATCAATTATCTAGG
CCAACGATGAATGCAGGTGCTGTGTGAAAGTGCCTCTGTTCCTGGAGAGG
GACGGATCCAAGTTGAATCAAAGCCGGAACGTGACTTTTGCCGAAAGTAA
ATTGAGCCACCGCAGCGATAAAAGCTGCCATGCCAACCGGCGAGTGGCGC
TAGGACACTCGTAAAGATAAAGGATCCATGGCTCGGCCGAATCCAGGTGC
ACCCGTGATGAGAGGCGATGACATCTATTCGCGGGTGCACTCCGCCACCC
CTCTGCCCCTGCCCCTACACCTGGTCCTCCTGCTCTTCCTGCTCGTGCTG
CAGCTCCTGGCACCGGCTGCAGCGACTCCCGTGAATCCCTGTCCCCACAA
GGGCATGGCCGAACTGATTCGCAACAGTCCGGTAATTGTCAAGGCCCTCG
TCGCACGGATCTTCGCCGATGAGCCGGAGGGACCGGTGCAGTCCCTCGCA
CAGGACACGATTTTAATAACATTAACGCCGGAAACGATATACAAGGGTGC
CTCGCTGCTGAAAGTGGCCAACGGCAATACCGATGCCGGGAATCCCATGT
CGCCGAGGGTGGGAGGTCTCATGTCCTGGAGCTCGGGCCATCGCAGCAGA
GGTGGCAGCGCTGGATCCGCGGGCAGCGGTGGCACCTGGAGTGGCGCTGA
GTCAGCCTTTCAGTACGAGGGGCAGTTGAATGCGACCCTCCAGCCACTGC
GTTGTTTCGATAATAACATGCTGAAAATGCTGCCGGCGGAGTTAATTGCC
TTTGGCAAACTGCTGCCCGCTGCGACGGCATCCACCGGAGGCAGTCCGCA
GACCGCACGACAGCTTCAACGACCGCCCGTGGGTGGCGCCACCGATGTGC
TGCAAGTCAGCGTCAACGGTCTGCATCGCTGGACGCCGCAGTTCGAGAAT
CATATCTGGAAGCATTTGGGCTGGGACGATTGGAGCGACTTCACCTTGTG
CAGTGTCACCTGCGGTCAGGGGGTGCAGCAGCGTTTCCGGCGCTGTCTAC
TCGACAATCCGCTGGTGGACATCAACATGAACATCAATCTGGAGGAGGAC
GACGACGACGACGACGAGGATGAACAGGCTCAGGGTGCAGACGATGCGGG
CGCAGTTGCCCAACTGTCCAAGGAGACGGACGTTTTCGGCGATGGCAACA
ACGATCTGCTGGCAGATGAGGATGAGAACGAGCTGCTCATAATGCGAGCA
AGTGGCGACGAGTCATTGCATAAATTTGACCAGGCAACGACGACGATTAC
GCCGCAGACCAGTGTCCGTGCCCATGCCCATCCGAGCGCCAGTCCCCCGG
CACCTGACCCCATGGGAGAGACAAGCGGCGGTAATGAACCACCAAGTGAT
GATGAAGGAGCAGGCGTTGGAGGAGCTGGCGAAAGTGTCAGGTTTGTGCC
GAGTGCGCACAATGACCGGTCTGGAAACGAAGTGGGAGCTGGAGCGGCGA
CTGGCTCCAGTGCTGGGACCAGGAAGGCACGTGCCAGCAATCAGCACAAG
AAACGCAAGCCCACCAAGAGCGTGGCCCTGTCGACGCTCCTCTGCGAGGG
CTACAACATCGAGCAGCGCAACTGCAACAGTTTCGAGTGCAGCGATGACA
TAAGCGATCTGCTAAAGTTCTACAAGAAGCTGCCGATGGGTGAGGATTTG
CCAACTCAAGCTTCGGATGCTTCGCTTGCCCCTTCCTACCCGGATGCATA
TTCAAATTTGGACCTCACCACGGCGGGTCTGATGGGCACTGCATTCAGTC
CAACGCCCTCGACGCCCTACAACATGGGCTACATTCGCAGCTGGAGGAAC
CTCCTTAACTTCACCCTTATGGTCACATTAAGGGCTAAGAACGACACCAA
GAGCACGGCGACCATATTCTCCATAAGAAACGCCACTCACAATCTTTATC
TGGAGGCCTGCAAGGACGGACTGCGTTTGTATTTGGAGCGGGACAATACG
ACGGAAATGTTGCCGGTGAAATTCAATTTATACGATTATCGCTGGCATCA
AGTGGCCATCAGCATACAGAACGGCGATTTCATATCGATTTACGTCGATT
GCGCGTGGACAAACAGTTTCGTTGTCTCCAAGCGACTTTTTACGTTGCCC
GTGGACGCGGATGTCGAAATCGGACGCGGCTTCAATGGTGAACTGCAGCA
ACTGCTCGTGCTGCCGGAAAATCAGGAACGGCTGCAGTGCAGCAACAAGC
GCACCTCCATCAACGAGGTGAAGCGCTATATCATCGACACATTCATCGAG
GACTACAATGGCAACTGAGGCCAACGCCAATCGACCGAATGCCACTAAAT
ATGCATATATATTATGTGGCAGCAAGTCCGCTCGAAATCCGATTACAAAT
TCGGCAAATCAAAACTGCATAGATTTATGATTATTCATTTAATTTGCATA
CATCTGCATACATATGTATGTATTAGGCCTAGAATGTATGTATGTGCAAA
TTGACATACTAATATTACGCATACGCCATGTGATTTATGCGCTAGCAAAC
AGCGCACTCCACCACAGAAGCCATAACCAGTCAGTAAAATTCGATTGCGG
ACACATTATGGATGTCATCATTCGCATTCCAATCGAGGGAATGTGCTCGG
TATTTGTAATAATTAAGCTAATTTGACGGAATACAATAATTGTAAACGCA
GAAATTAAAATAATTTGCATAGCGAAAGTTAAATGCAAAAATGGAAAGAC
GAAGAGTAAGATCAAATATAACGCAACTATGTATATGGTAAAACAAAAAA
AAAAAAAAAAA

IP13133.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:37:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG12594.e 3368 CG12594.e 71..3368 1..3298 16490 100 Plus
CG12594-RA 3368 CG12594-RA 71..3368 1..3298 16490 100 Plus
CG12594.c 3170 CG12594.c 1..2562 1..2562 12810 100 Plus
CG12594.c 3170 CG12594.c 2563..3170 2687..3294 3040 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:09:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 7552524..7553198 548..1222 3375 100 Plus
chr3R 27901430 chr3R 7554809..7555488 1469..2148 3340 99.4 Plus
chr3R 27901430 chr3R 7557393..7558000 2687..3294 3010 99.7 Plus
chr3R 27901430 chr3R 7547315..7547864 1..550 2720 99.6 Plus
chr3R 27901430 chr3R 7553295..7553544 1221..1470 1250 100 Plus
chr3R 27901430 chr3R 7555605..7555850 2144..2389 1215 99.6 Plus
chr3R 27901430 chr3R 7555909..7556083 2388..2562 860 99.4 Plus
chr3R 27901430 chr3R 7556855..7556982 2560..2687 640 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:18:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:09:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11729282..11729961 1469..2148 3385 99.9 Plus
3R 32079331 3R 11727013..11727687 548..1222 3375 100 Plus
3R 32079331 3R 11731872..11732484 2687..3299 3065 100 Plus
3R 32079331 3R 11721804..11722353 1..550 2750 100 Plus
3R 32079331 3R 11727784..11728033 1221..1470 1250 100 Plus
3R 32079331 3R 11730078..11730323 2144..2389 1230 100 Plus
3R 32079331 3R 11730382..11730556 2388..2562 875 100 Plus
3R 32079331 3R 11731330..11731457 2560..2687 640 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 11470113..11470792 1469..2148 3385 99.8 Plus
3R 31820162 3R 11467844..11468518 548..1222 3375 100 Plus
3R 31820162 3R 11472703..11473315 2687..3299 3065 100 Plus
3R 31820162 3R 11462635..11463184 1..550 2750 100 Plus
3R 31820162 3R 11468615..11468864 1221..1470 1250 100 Plus
3R 31820162 3R 11470909..11471154 2144..2389 1230 100 Plus
3R 31820162 3R 11471213..11471387 2388..2562 875 100 Plus
3R 31820162 3R 11472161..11472288 2560..2687 640 100 Plus
Blast to na_te.dros performed on 2019-03-15 18:09:13 has no hits.

IP13133.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:09:49 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 7555606..7555850 2145..2389 99 -> Plus
chr3R 7555911..7556083 2390..2562 99 -> Plus
chr3R 7556858..7556981 2563..2686 100 -> Plus
chr3R 7547315..7547863 1..549 94 -> Plus
chr3R 7552526..7553197 550..1221 100 -> Plus
chr3R 7553296..7553543 1222..1469 100 -> Plus
chr3R 7554810..7555484 1470..2144 96 -> Plus
chr3R 7557393..7558000 2687..3294 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:48:38 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
CG12594-RA 1..2061 758..2818 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:02:42 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
CG12594-RA 1..2061 758..2818 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:54:46 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
CG12594-RA 1..2061 758..2818 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:46:39 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
CG12594-RA 1..2061 758..2818 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:54:29 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
CG12594-RA 1..2061 758..2818 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:48:38 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
CG12594-RA 1..3294 1..3294 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:02:42 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
CG12594-RA 1..3294 1..3294 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:54:46 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
CG12594-RA 71..3364 1..3294 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:46:39 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
CG12594-RA 1..3294 1..3294 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:54:29 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
CG12594-RA 71..3364 1..3294 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:09:49 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11721804..11722352 1..549 100 -> Plus
3R 11727015..11727686 550..1221 100 -> Plus
3R 11727785..11728032 1222..1469 100 -> Plus
3R 11729283..11729957 1470..2144 100 -> Plus
3R 11730079..11730323 2145..2389 100 -> Plus
3R 11730384..11730556 2390..2562 100 -> Plus
3R 11731333..11731456 2563..2686 100 -> Plus
3R 11731872..11732479 2687..3294 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:09:49 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11721804..11722352 1..549 100 -> Plus
3R 11727015..11727686 550..1221 100 -> Plus
3R 11727785..11728032 1222..1469 100 -> Plus
3R 11729283..11729957 1470..2144 100 -> Plus
3R 11730079..11730323 2145..2389 100 -> Plus
3R 11730384..11730556 2390..2562 100 -> Plus
3R 11731333..11731456 2563..2686 100 -> Plus
3R 11731872..11732479 2687..3294 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:09:49 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11721804..11722352 1..549 100 -> Plus
3R 11727015..11727686 550..1221 100 -> Plus
3R 11727785..11728032 1222..1469 100 -> Plus
3R 11729283..11729957 1470..2144 100 -> Plus
3R 11730079..11730323 2145..2389 100 -> Plus
3R 11730384..11730556 2390..2562 100 -> Plus
3R 11731333..11731456 2563..2686 100 -> Plus
3R 11731872..11732479 2687..3294 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:54:46 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7547526..7548074 1..549 100 -> Plus
arm_3R 7552737..7553408 550..1221 100 -> Plus
arm_3R 7553507..7553754 1222..1469 100 -> Plus
arm_3R 7555005..7555679 1470..2144 100 -> Plus
arm_3R 7555801..7556045 2145..2389 100 -> Plus
arm_3R 7556106..7556278 2390..2562 100 -> Plus
arm_3R 7557055..7557178 2563..2686 100 -> Plus
arm_3R 7557594..7558201 2687..3294 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:22:26 Download gff for IP13133.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11462635..11463183 1..549 100 -> Plus
3R 11467846..11468517 550..1221 100 -> Plus
3R 11468616..11468863 1222..1469 100 -> Plus
3R 11470114..11470788 1470..2144 100 -> Plus
3R 11470910..11471154 2145..2389 100 -> Plus
3R 11471215..11471387 2390..2562 100 -> Plus
3R 11472164..11472287 2563..2686 100 -> Plus
3R 11472703..11473310 2687..3294 100   Plus

IP13133.pep Sequence

Translation from 727 to 2817

> IP13133.pep
MARPNPGAPVMRGDDIYSRVHSATPLPLPLHLVLLLFLLVLQLLAPAAAT
PVNPCPHKGMAELIRNSPVIVKALVARIFADEPEGPVQSLAQDTILITLT
PETIYKGASLLKVANGNTDAGNPMSPRVGGLMSWSSGHRSRGGSAGSAGS
GGTWSGAESAFQYEGQLNATLQPLRCFDNNMLKMLPAELIAFGKLLPAAT
ASTGGSPQTARQLQRPPVGGATDVLQVSVNGLHRWTPQFENHIWKHLGWD
DWSDFTLCSVTCGQGVQQRFRRCLLDNPLVDINMNINLEEDDDDDDEDEQ
AQGADDAGAVAQLSKETDVFGDGNNDLLADEDENELLIMRASGDESLHKF
DQATTTITPQTSVRAHAHPSASPPAPDPMGETSGGNEPPSDDEGAGVGGA
GESVRFVPSAHNDRSGNEVGAGAATGSSAGTRKARASNQHKKRKPTKSVA
LSTLLCEGYNIEQRNCNSFECSDDISDLLKFYKKLPMGEDLPTQASDASL
APSYPDAYSNLDLTTAGLMGTAFSPTPSTPYNMGYIRSWRNLLNFTLMVT
LRAKNDTKSTATIFSIRNATHNLYLEACKDGLRLYLERDNTTEMLPVKFN
LYDYRWHQVAISIQNGDFISIYVDCAWTNSFVVSKRLFTLPVDADVEIGR
GFNGELQQLLVLPENQERLQCSNKRTSINEVKRYIIDTFIEDYNGN*

IP13133.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:18:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18396-PA 670 GF18396-PA 45..670 55..696 2376 72.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:18:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18421-PA 690 GG18421-PA 1..690 1..696 3027 91.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:18:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18270-PA 743 GH18270-PA 61..743 55..696 1909 58.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:17:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG12594-PB 686 CG12594-PB 1..686 11..696 3603 100 Plus
CG12594-PA 686 CG12594-PA 1..686 11..696 3603 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24077-PA 690 GI24077-PA 47..690 55..696 1833 58.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:18:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12386-PA 685 GL12386-PA 41..685 55..696 2056 64.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:18:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11710-PA 664 GA11710-PA 41..664 55..696 1974 63 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23976-PA 560 GM23976-PA 1..237 11..247 975 95.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18781-PA 693 GD18781-PA 1..693 1..696 3581 96.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:18:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10897-PA 702 GJ10897-PA 51..702 55..696 1897 60.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:18:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11102-PA 676 GK11102-PA 60..676 55..696 1829 61.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:18:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24199-PA 698 GE24199-PA 1..698 1..696 2909 86.1 Plus

IP13133.hyp Sequence

Translation from 727 to 2817

> IP13133.hyp
MARPNPGAPVMRGDDIYSRVHSATPLPLPLHLVLLLFLLVLQLLAPAAAT
PVNPCPHKGMAELIRNSPVIVKALVARIFADEPEGPVQSLAQDTILITLT
PETIYKGASLLKVANGNTDAGNPMSPRVGGLMSWSSGHRSRGGSAGSAGS
GGTWSGAESAFQYEGQLNATLQPLRCFDNNMLKMLPAELIAFGKLLPAAT
ASTGGSPQTARQLQRPPVGGATDVLQVSVNGLHRWTPQFENHIWKHLGWD
DWSDFTLCSVTCGQGVQQRFRRCLLDNPLVDINMNINLEEDDDDDDEDEQ
AQGADDAGAVAQLSKETDVFGDGNNDLLADEDENELLIMRASGDESLHKF
DQATTTITPQTSVRAHAHPSASPPAPDPMGETSGGNEPPSDDEGAGVGGA
GESVRFVPSAHNDRSGNEVGAGAATGSSAGTRKARASNQHKKRKPTKSVA
LSTLLCEGYNIEQRNCNSFECSDDISDLLKFYKKLPMGEDLPTQASDASL
APSYPDAYSNLDLTTAGLMGTAFSPTPSTPYNMGYIRSWRNLLNFTLMVT
LRAKNDTKSTATIFSIRNATHNLYLEACKDGLRLYLERDNTTEMLPVKFN
LYDYRWHQVAISIQNGDFISIYVDCAWTNSFVVSKRLFTLPVDADVEIGR
GFNGELQQLLVLPENQERLQCSNKRTSINEVKRYIIDTFIEDYNGN*

IP13133.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:55:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG12594-PB 686 CG12594-PB 1..686 11..696 3603 100 Plus
CG12594-PA 686 CG12594-PA 1..686 11..696 3603 100 Plus