Clone IP13211 Report

Search the DGRC for IP13211

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:132
Well:11
Vector:pOT2
Associated Gene/TranscriptCG15534-RA
Protein status:IP13211.pep: validated not full length
Preliminary Size:2001
Sequenced Size:2177

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15534 2005-01-01 Successful iPCR screen
CG15534 2008-04-29 Release 5.5 accounting
CG15534 2008-08-15 Release 5.9 accounting
CG15534 2008-12-18 5.12 accounting

Clone Sequence Records

IP13211.complete Sequence

2177 bp (2177 high quality bases) assembled on 2005-03-28

GenBank Submission: BT022820

> IP13211.complete
TTGATCCGGGGCACAACTCTTTTGGGCATCGGCATATTATTCGTCGGGTG
CGGGGCGTTCAGCCTGCCCTCCGTTTACGATGTCCTGTCTAAGGATCAGC
AGGCCACATCCTTTGTATCAGCCAGCATAGCGGAAGAGATAAGCCGTGAG
TACCTGAAGTACCACCGAACTGGCATCGAGACGGAGAGGCTTCGCCAGCT
GGGAAAGGACATCCGGAGTAGTCACAGCAAGAAGGCCATTTTCACGGAAT
CCATGGCCGATCTCACCTCAACGGACCAGTTCTTCGTCTGCACCCTGTGC
AGATCTACCATCAACGTGTTTGCTCGAACTTTCACCGAGGGCGAGCTGAG
TGGTCCGGAAAGGGATGATGAGGCGAAGAAATTGATGCTGGGCATGTGTG
ACTACTTTGCTATCAGCACCCAGGAGGTGTGCTCCGGATTATTCGATCTC
AACTGGCCGATTCTGGACTTTATTCTGAACGAAACTGTGGCAAAGTCGAA
CACCTTTTGCAGCATGCTGCCCATCCCAATTTGTCAGGTGAAACAGGATG
AGTACAATCTCACCTTGTCCATCCAGGGAGACTTGCCCCAGGAATCGAAC
TCCAACTTGCCCGCCAAGACCTCCGAGGATATTCTTGTCCTGCACCTGAC
CGACATCCACTACGATCCTGAATACGCCGAGGGCAGCAATGCAGCTTGCG
ATGAGCCCATGTGCTGCAGAAATTCCCTGCCCGAAGGATCTGACTCGTCG
GCAGCTGCTGGCTTTTGGTCTGATTACCGTGATTGTGACTGCCCCAAACG
CCTCATCCTTAGTGCTTTCGAGCACATCAAGGAAAACCACAAGATCGAGT
GGATATACCATACTGGAGATGTGCCGCCCCACAACGTGTGGTCCACCACC
AGACAGGGCAACCTGGATATGTTGTCCGAAATCGACGAACTGCTGGCCAA
GTATTTCCCGGACACGCCCATCTACCCATGTCTTGGAAACCACGAGCCAC
ATCCAGCAAATGTTTTCGGAAACGACGAGATTCCCAGCTCCCTTAGAGTT
GACTGGTTGTATGAGCACGTGTGGAGTTTGTGGTCCAAGTGGTTGCCCGC
CGAGGCGGAGGAGACTGTTCTTCGAGGAGGATATTACACTGCATCCCCGA
GCAAAGGACACAGGATTGTGGCCCTGAACAGCATGGACTGCTACCTGTAC
AACTGGTGGTTGTTCTATAATGCCACGTTGATTCAGGAGCAGCTGCAGTG
GTTCCACGACACTCTATTGTCTGCGGAGGAGGCGGGAGAATCGGTCCACA
TCCTGACCCATATTCCCGCTGGAGATGGAGACTGCTGGTGTAACTGGTCT
CAAGAATACAATAGGGTTCTCACCCGATTCAATGGCATCATCACTGGAGT
CTTCAGTGGTCACACCCACAAGGACGAGATGAACTTGCATTACTCCGAGG
ACGGCTATGCCACGGTGGTCAACTGGAATGGCGGTAGTCTGACCTCCTAC
TCGAACAAGAACCCCAACTACCGGCTGTACGAACTCCACCCGGAGAACTG
GCAGGTCCTGGACCACCACACGTACACATTCAACCTGACGGAGGCCAACC
TGACGCCCGACGAGCAGCCCAAGTGGGAGCTGGAGTACCAGTTCACCAAG
GAGTACACCGAGGACACCAGTCCCGCGGGAATCGATCGCTTGCTGTTGGA
AATGGCTGAGAAGCCCGACTTGCTAAGGAAGTTCTGGAGGAACAAGTTCA
CCAACTCCGATCCCAAGCTGGCAGAGGGCTGTGATAACGCATGTTTGAGC
AAGACGATTTGCAGGATAGCCACCAGTAATTACCAGGAGCGCACTCGCTG
CAAGGAACTCCAGGCCATCCTGGCTGAGAGCTTGGAAAACGAGCCGGATA
CGGATGATAATAATGGCGGAGGTGCTGCTGGACTATCTGCCCTCAGTTTG
GCCTCCCTGCTGGCGCTTTTGGCTGCATCTAAGCTCCTTGGATAAGCCTT
ATCAATGCCCCCCGTCTATTCTTAACCCCTGTTATCAACGTCGATAATCG
CAGCCCATAAAATGGGTTATAAAACAGTATAAAAAAGACCCAAAGTCTTT
ACAGATTATGGAATACCAAGAGAAATAAACACACACGTTTCTTGTAGTCA
ACACTCAGAAAAAAAAAAAAAAAAAAA

IP13211.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:50:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG15534-RA 2281 CG15534-RA 116..2275 1..2160 10800 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:02:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 26254973..26255867 119..1013 4280 98.5 Plus
chr3R 27901430 chr3R 26256507..26257374 1014..1881 4205 99 Plus
chr3R 27901430 chr3R 26257434..26257693 1882..2158 1000 92.4 Plus
chr3R 27901430 chr3R 26254635..26254755 1..121 590 99.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:19:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:02:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30432408..30433302 119..1013 4475 100 Plus
3R 32079331 3R 30433936..30434803 1014..1881 4340 100 Plus
3R 32079331 3R 30434863..30435141 1882..2160 1395 100 Plus
3R 32079331 3R 30432070..30432190 1..121 605 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:10:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 30173239..30174133 119..1013 4475 100 Plus
3R 31820162 3R 30174767..30175634 1014..1881 4340 100 Plus
3R 31820162 3R 30175694..30175972 1882..2160 1395 100 Plus
3R 31820162 3R 30172901..30173021 1..121 605 100 Plus
Blast to na_te.dros performed on 2019-03-16 01:02:44 has no hits.

IP13211.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:04:10 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 26257434..26257571 1882..2019 98 == Plus
chr3R 26257572..26257693 2036..2158 97   Plus
chr3R 26254635..26254755 1..121 99 -> Plus
chr3R 26254976..26255867 122..1013 98 -> Plus
chr3R 26256507..26257374 1014..1881 98 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:54:34 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
CG15534-RA 7..2001 1..1995 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:46:07 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
CG15534-RA 7..2001 1..1995 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:00:49 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
CG15534-RA 7..2001 1..1995 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:27:06 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
CG15534-RA 7..2001 1..1995 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:20:15 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
CG15534-RA 7..2001 1..1995 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:55:04 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
CG15534-RA 7..2164 1..2158 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:46:07 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
CG15534-RA 7..2164 1..2158 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:00:49 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
CG15534-RA 7..2164 1..2158 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:27:07 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
CG15534-RA 7..2164 1..2158 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:20:15 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
CG15534-RA 7..2164 1..2158 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:04:10 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30432070..30432190 1..121 100 -> Plus
3R 30432411..30433302 122..1013 100 -> Plus
3R 30433936..30434803 1014..1881 100 -> Plus
3R 30434863..30435139 1882..2158 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:04:10 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30432070..30432190 1..121 100 -> Plus
3R 30432411..30433302 122..1013 100 -> Plus
3R 30433936..30434803 1014..1881 100 -> Plus
3R 30434863..30435139 1882..2158 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:04:10 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30432070..30432190 1..121 100 -> Plus
3R 30432411..30433302 122..1013 100 -> Plus
3R 30433936..30434803 1014..1881 100 -> Plus
3R 30434863..30435139 1882..2158 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:00:49 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26257792..26257912 1..121 100 -> Plus
arm_3R 26258133..26259024 122..1013 100 -> Plus
arm_3R 26259658..26260525 1014..1881 100 -> Plus
arm_3R 26260585..26260861 1882..2158 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:00:09 Download gff for IP13211.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30173242..30174133 122..1013 100 -> Plus
3R 30174767..30175634 1014..1881 100 -> Plus
3R 30175694..30175970 1882..2158 100   Plus
3R 30172901..30173021 1..121 100 -> Plus

IP13211.pep Sequence

Translation from 0 to 1994

> IP13211.pep
LIRGTTLLGIGILFVGCGAFSLPSVYDVLSKDQQATSFVSASIAEEISRE
YLKYHRTGIETERLRQLGKDIRSSHSKKAIFTESMADLTSTDQFFVCTLC
RSTINVFARTFTEGELSGPERDDEAKKLMLGMCDYFAISTQEVCSGLFDL
NWPILDFILNETVAKSNTFCSMLPIPICQVKQDEYNLTLSIQGDLPQESN
SNLPAKTSEDILVLHLTDIHYDPEYAEGSNAACDEPMCCRNSLPEGSDSS
AAAGFWSDYRDCDCPKRLILSAFEHIKENHKIEWIYHTGDVPPHNVWSTT
RQGNLDMLSEIDELLAKYFPDTPIYPCLGNHEPHPANVFGNDEIPSSLRV
DWLYEHVWSLWSKWLPAEAEETVLRGGYYTASPSKGHRIVALNSMDCYLY
NWWLFYNATLIQEQLQWFHDTLLSAEEAGESVHILTHIPAGDGDCWCNWS
QEYNRVLTRFNGIITGVFSGHTHKDEMNLHYSEDGYATVVNWNGGSLTSY
SNKNPNYRLYELHPENWQVLDHHTYTFNLTEANLTPDEQPKWELEYQFTK
EYTEDTSPAGIDRLLLEMAEKPDLLRKFWRNKFTNSDPKLAEGCDNACLS
KTICRIATSNYQERTRCKELQAILAESLENEPDTDDNNGGGAAGLSALSL
ASLLALLAASKLLG*

IP13211.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:38:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22902-PA 669 GF22902-PA 3..633 1..631 2691 77.2 Plus
Dana\GF18835-PA 695 GF18835-PA 12..648 8..640 1618 46.5 Plus
Dana\GF18837-PA 687 GF18837-PA 7..685 7..662 1611 44.3 Plus
Dana\GF11387-PA 697 GF11387-PA 147..680 97..626 786 32.8 Plus
Dana\GF24679-PA 474 GF24679-PA 46..433 261..623 266 25.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:38:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11750-PA 666 GG11750-PA 3..634 1..632 3172 90.3 Plus
Dere\GG11749-PA 687 GG11749-PA 7..665 7..642 1608 46 Plus
Dere\GG22956-PA 728 GG22956-PA 151..684 97..626 768 32.6 Plus
Dere\GG15414-PA 479 GG15414-PA 29..458 246..659 284 26.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14065-PA 662 GH14065-PA 9..655 7..657 2361 63.9 Plus
Dgri\GH14054-PA 663 GH14054-PA 4..661 12..662 1613 45.2 Plus
Dgri\GH14043-PA 663 GH14043-PA 4..661 12..662 1557 44.8 Plus
Dgri\GH20981-PA 620 GH20981-PA 44..577 97..626 801 32.6 Plus
Dgri\GH15435-PA 497 GH15435-PA 16..452 215..623 288 25.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG15534-PA 666 CG15534-PA 3..666 1..664 3589 100 Plus
CG15533-PA 692 CG15533-PA 16..690 14..662 1650 45.8 Plus
CG3376-PB 708 CG3376-PB 158..691 97..626 800 32.8 Plus
CG3376-PD 726 CG3376-PD 158..691 97..626 800 32.8 Plus
CG3376-PA 735 CG3376-PA 158..691 97..626 800 32.8 Plus
CG3376-PC 764 CG3376-PC 187..720 97..626 800 32.8 Plus
CG32052-PE 509 CG32052-PE 16..487 201..658 309 25.4 Plus
CG32052-PD 509 CG32052-PD 16..487 201..658 309 25.4 Plus
CG32052-PC 509 CG32052-PC 16..487 201..658 309 25.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:38:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24855-PA 665 GI24855-PA 19..664 17..663 2372 65.4 Plus
Dmoj\GI24854-PA 664 GI24854-PA 11..662 14..662 1704 46.6 Plus
Dmoj\GI21317-PA 716 GI21317-PA 148..681 97..626 784 32 Plus
Dmoj\GI13036-PA 499 GI13036-PA 1..469 191..627 268 24.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:38:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13458-PA 666 GL13458-PA 3..665 1..663 2648 73.6 Plus
Dper\GL13457-PA 675 GL13457-PA 1..638 2..634 1663 46.5 Plus
Dper\GL20005-PA 471 GL20005-PA 135..456 97..418 555 35.5 Plus
Dper\GL16296-PA 499 GL16296-PA 54..473 254..659 276 25.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:38:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13792-PA 666 GA13792-PA 3..665 1..663 2651 73.8 Plus
Dpse\GA13791-PA 675 GA13791-PA 1..638 2..634 1662 46.5 Plus
Dpse\GA17413-PB 711 GA17413-PB 154..687 97..626 769 32.8 Plus
Dpse\GA17413-PA 735 GA17413-PA 154..687 97..626 768 32.8 Plus
Dpse\GA17413-PC 776 GA17413-PC 195..728 97..626 767 32.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:38:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12879-PA 666 GM12879-PA 3..666 1..664 3519 97.6 Plus
Dsec\GM12878-PA 690 GM12878-PA 7..688 7..662 1608 45.6 Plus
Dsec\GM11849-PA 632 GM11849-PA 159..588 203..626 721 36.2 Plus
Dsec\GM25187-PA 479 GM25187-PA 29..458 246..659 290 26.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:38:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21518-PA 444 GD21518-PA 3..444 1..442 2322 96.6 Plus
Dsim\GD21517-PA 446 GD21517-PA 1..444 237..662 1226 51.1 Plus
Dsim\GD21519-PA 188 GD21519-PA 1..188 477..664 968 96.8 Plus
Dsim\GD11848-PA 708 GD11848-PA 158..691 97..626 768 32.6 Plus
Dsim\GD14219-PA 479 GD14219-PA 29..458 246..659 286 26.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:38:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24499-PA 668 GJ24499-PA 21..665 19..663 2434 65.7 Plus
Dvir\GJ24498-PA 667 GJ24498-PA 4..647 7..644 1659 46.6 Plus
Dvir\GJ21587-PA 748 GJ21587-PA 180..713 97..626 799 32.6 Plus
Dvir\GJ12131-PA 440 GJ12131-PA 4..378 277..627 256 25.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:38:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14134-PA 674 GK14134-PA 8..632 6..628 2297 64.4 Plus
Dwil\GK14133-PA 687 GK14133-PA 9..685 7..662 1599 45.4 Plus
Dwil\GK22200-PA 719 GK22200-PA 151..684 97..626 784 32 Plus
Dwil\GK11001-PA 498 GK11001-PA 28..467 215..623 265 24.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:38:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10877-PA 666 GE10877-PA 3..666 1..664 3292 91.3 Plus
Dyak\GE10876-PA 691 GE10876-PA 7..650 7..643 1607 46.1 Plus
Dyak\GE14393-PA 735 GE14393-PA 157..690 97..626 763 32.6 Plus
Dyak\GE21722-PA 497 GE21722-PA 12..470 215..659 294 26 Plus

IP13211.hyp Sequence

Translation from 0 to 1994

> IP13211.hyp
LIRGTTLLGIGILFVGCGAFSLPSVYDVLSKDQQATSFVSASIAEEISRE
YLKYHRTGIETERLRQLGKDIRSSHSKKAIFTESMADLTSTDQFFVCTLC
RSTINVFARTFTEGELSGPERDDEAKKLMLGMCDYFAISTQEVCSGLFDL
NWPILDFILNETVAKSNTFCSMLPIPICQVKQDEYNLTLSIQGDLPQESN
SNLPAKTSEDILVLHLTDIHYDPEYAEGSNAACDEPMCCRNSLPEGSDSS
AAAGFWSDYRDCDCPKRLILSAFEHIKENHKIEWIYHTGDVPPHNVWSTT
RQGNLDMLSEIDELLAKYFPDTPIYPCLGNHEPHPANVFGNDEIPSSLRV
DWLYEHVWSLWSKWLPAEAEETVLRGGYYTASPSKGHRIVALNSMDCYLY
NWWLFYNATLIQEQLQWFHDTLLSAEEAGESVHILTHIPAGDGDCWCNWS
QEYNRVLTRFNGIITGVFSGHTHKDEMNLHYSEDGYATVVNWNGGSLTSY
SNKNPNYRLYELHPENWQVLDHHTYTFNLTEANLTPDEQPKWELEYQFTK
EYTEDTSPAGIDRLLLEMAEKPDLLRKFWRNKFTNSDPKLAEGCDNACLS
KTICRIATSNYQERTRCKELQAILAESLENEPDTDDNNGGGAAGLSALSL
ASLLALLAASKLLG*

IP13211.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:56:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG15534-PA 666 CG15534-PA 3..666 1..664 3589 100 Plus
CG15533-PA 692 CG15533-PA 16..690 14..662 1650 45.8 Plus
CG3376-PB 708 CG3376-PB 158..691 97..626 800 32.8 Plus
CG3376-PD 726 CG3376-PD 158..691 97..626 800 32.8 Plus
CG3376-PA 735 CG3376-PA 158..691 97..626 800 32.8 Plus