Clone IP13384 Report

Search the DGRC for IP13384

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:133
Well:84
Vector:pOT2
Associated Gene/TranscriptCG31805-RB
Protein status:IP13384.pep: gold
Preliminary Size:1734
Sequenced Size:2034

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31805 2005-01-01 Successful iPCR screen
CG31805 2008-04-29 Release 5.5 accounting
CG31805 2008-08-15 Release 5.9 accounting
CG31805 2008-12-18 5.12 accounting

Clone Sequence Records

IP13384.complete Sequence

2034 bp (2034 high quality bases) assembled on 2006-01-20

GenBank Submission: BT024289

> IP13384.complete
ATCTAAAATAAAATGTTTCTGCTTGGGATCTGCTTTATTTGCAGTCTTAA
CCCTTTAGTGCTAAATGCATTTCCTGTGGAATCCCAGGCCGATTCCAAGG
ATTTGAGTGTCCTGAATGCTCCCTTGACCGATCCTGCCGACTATCCCGAC
CTCACAAATGGTCTTACCGATGCGGAGGTACAGGAGAGCCTCAAGGATCT
AACCTTAGATGATCTTAACTCCTTGAACAAGCTACTTGATGAGCGCCTTG
GCCGAGATGAAGATGTCGACTCTGACGCGAGTCTAACAACACATGGTAGA
CAAGCGATGGCCAATATACGCAAGCAGGACTTTCAGTCCATGGAAGTAGG
TCTCGATGATAACTGCCGGGATGAGGAGGATTCCGATGAAACGAAGCCTA
ATTTGTGCACAAAGAGACCCACTTGCCCGACTACCAAGCGTTGCTCAAGG
AAAAGCACTTGTGTGCCGAAAACCACTCGAATGTGCTCAACTAAAAGCGC
CTACGATAGTTGCAAGCCAAAATCCGGTGGCTTTATGGACGACGATCTTA
TAAGCGAAACTACCAAATCTCCGAAGCCAAAGAACAAAAAGTGCAAGAAA
CCTAAGGATGACTTCGAATGCGAGGCAGATGACTTTCTGTGCCAGGCCAG
CAGGCGATCAAGGGGCAAGGAAAGTAGAAACACACTTTTGGATGAAGAAT
ATATTCCAGGGCGGCCGTTGACTGGAAATGCGCAGCTGGGTGATGAGCTC
ACATCAGCATTAAATGATCAAGGTGAACCATTGAATGATGCACAAATGGA
ACTATCAAACTCCGAGTTTGACAACAACTTAGGCCTAGAAAATCCAGATA
GTTTGGAGCAAGGTCAGCCTTTTGACTTAGGAAAGGATAGCAAGATTAAT
ACAGAGCAGAAACATCAAACTAATTTAAAAAACGAGTATAGTCGTGAAAA
TCTTATGCAGGATTACCCCAAAAACTTGAAGCACGAACCTTCAGGCCAAT
TGAAAGAAGAAGATCAGGCCAACTTGGATCAGAACTATAATGCTAAGATT
GATCAAGAACAATCTACTGGCTTAGAGCTAAAAAGCCAGTCCACTTTGGA
TCAAGAAGATCAGTTTAATTTAAACAAGGAATATCAGCCAAACTTAGATT
TTACCAATCCGGTCAATTTCGAGCAGGAGCATCAGTCTAATTTCGATTCA
GAATATCAGAACAACTTTCAAAAAGATCATCTGACCAACTGGGAGAAAGA
ACATCTGGCAAACTTCGATGCTGGACAATCAGCTAGTTTGCATCAAGGTG
AACAGCAGTTCAATCGGAATCAGAAGGCACCTAATGTGGAGGGAGTCGAC
AGGAGTCGACAAAACGAACCGATAGCGAATGAAGCAGATCCGCTTGATCC
TAACGATCGGCATCAGTCCTCCAGGACCTCACTTCGTAAGAGAGAACAAA
CAGAGAAGCAATTTGAGGAGCACATGCCCAATGAAGATGATAATAAACAG
GCGAGTATCAAGGATGAGCTGATGCCACTTAACACTGATCTGCCCAAGCA
GGAACATCTCTTCGATAGCGAAAGTTTTATTGCCAATAATGCTCGGGATC
CACCTCGTTATTTGATTCAAATGCAAGACGACTATATACAAAGTGAAAAT
GATAGTGGCGAGCGTCGATTGCTTGAGGATCGAAGGGAAAGCGAGGCGTT
AAACATGGACAAACTCACCGAGGAGGAGCCCAGAACAATGGAGGAATTCC
ATTTGGATTCCGAGTACAGGAGGAAAAAGCGCGAGAATAAGAATACTGAT
GACTCTCCCGAGAAACATATATAAAGATGCTGATGGACTCTTTTCCGCGG
GATCAGGGTGGCCGGATCAACGCTCATGCGGCATTGAGGCAGTCCAATCT
CGCCCATTTACGCATCAAGCGAAGTTGAATTATATATGTATATTCAACGC
TATACTTGATAATTTCCATTATATATATATTTTATATGCACCCATAAAAT
GATAATCAAACTGCGAAAAAAAAAAAAAAAAAAA

IP13384.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:21:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG31805.a 2210 CG31805.a 66..2081 1..2016 10065 99.9 Plus
CG31805-RB 2104 CG31805-RB 66..2081 1..2016 10065 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:08:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 16897406..16898703 1574..277 6430 99.7 Minus
chr2L 23010047 chr2L 16897102..16897342 1812..1572 1205 100 Minus
chr2L 23010047 chr2L 16896836..16897040 2015..1811 995 99 Minus
chr2L 23010047 chr2L 16898761..16898960 277..78 985 99.5 Minus
chr2L 23010047 chr2L 16899015..16899093 79..1 380 98.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:19:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:08:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16898746..16900043 1574..277 6475 99.9 Minus
2L 23513712 2L 16898441..16898681 1812..1572 1205 100 Minus
2L 23513712 2L 16898174..16898379 2016..1811 1030 100 Minus
2L 23513712 2L 16900101..16900300 277..78 1000 100 Minus
2L 23513712 2L 16900353..16900431 79..1 395 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:13:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16898746..16900043 1574..277 6475 99.9 Minus
2L 23513712 2L 16898441..16898681 1812..1572 1205 100 Minus
2L 23513712 2L 16898174..16898379 2016..1811 1030 100 Minus
2L 23513712 2L 16900101..16900300 277..78 1000 100 Minus
2L 23513712 2L 16900353..16900431 79..1 395 100 Minus
Blast to na_te.dros performed 2019-03-16 15:08:12
Subject Length Description Subject Range Query Range Score Percent Strand
gtwin 7411 gtwin GTWIN 7411bp 5289..5347 556..613 121 69.5 Plus
Doc2-element 4789 Doc2-element DOC2 4789bp 1198..1251 443..496 117 68.5 Plus

IP13384.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:09:13 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 16896836..16897038 1813..2015 99 <- Minus
chr2L 16897102..16897339 1575..1812 100 <- Minus
chr2L 16897406..16898702 278..1574 99 <- Minus
chr2L 16898761..16898959 79..277 99 <- Minus
chr2L 16899016..16899093 1..78 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:55:03 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31805-RB 1..1812 13..1824 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:37:22 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31805-RB 1..1812 13..1824 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:40:55 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31805-RC 1..1926 13..1928 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:12:16 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31805-RB 1..1812 13..1824 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:40:59 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31805-RC 1..1926 13..1928 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:09:08 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31805-RB 1..2015 1..2015 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:37:22 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31805-RB 1..2015 1..2015 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:40:55 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31805-RB 43..2057 1..2015 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:12:17 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31805-RB 1..2015 1..2015 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:40:59 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31805-RB 43..2057 1..2015 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:09:13 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16900101..16900299 79..277 100 <- Minus
2L 16900354..16900431 1..78 100   Minus
2L 16898441..16898678 1575..1812 100 <- Minus
2L 16898175..16898377 1813..2015 100 <- Minus
2L 16898746..16900042 278..1574 99 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:09:13 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16900101..16900299 79..277 100 <- Minus
2L 16900354..16900431 1..78 100   Minus
2L 16898441..16898678 1575..1812 100 <- Minus
2L 16898175..16898377 1813..2015 100 <- Minus
2L 16898746..16900042 278..1574 99 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:09:13 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16900101..16900299 79..277 100 <- Minus
2L 16900354..16900431 1..78 100   Minus
2L 16898441..16898678 1575..1812 100 <- Minus
2L 16898175..16898377 1813..2015 100 <- Minus
2L 16898746..16900042 278..1574 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:40:55 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16898175..16898377 1813..2015 100 <- Minus
arm_2L 16898441..16898678 1575..1812 100 <- Minus
arm_2L 16898746..16900042 278..1574 99 <- Minus
arm_2L 16900101..16900299 79..277 100 <- Minus
arm_2L 16900354..16900431 1..78 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:00:35 Download gff for IP13384.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16898441..16898678 1575..1812 100 <- Minus
2L 16898746..16900042 278..1574 99 <- Minus
2L 16900101..16900299 79..277 100 <- Minus
2L 16900354..16900431 1..78 100   Minus
2L 16898175..16898377 1813..2015 100 <- Minus

IP13384.pep Sequence

Translation from 12 to 1823

> IP13384.pep
MFLLGICFICSLNPLVLNAFPVESQADSKDLSVLNAPLTDPADYPDLTNG
LTDAEVQESLKDLTLDDLNSLNKLLDERLGRDEDVDSDASLTTHGRQAMA
NIRKQDFQSMEVGLDDNCRDEEDSDETKPNLCTKRPTCPTTKRCSRKSTC
VPKTTRMCSTKSAYDSCKPKSGGFMDDDLISETTKSPKPKNKKCKKPKDD
FECEADDFLCQASRRSRGKESRNTLLDEEYIPGRPLTGNAQLGDELTSAL
NDQGEPLNDAQMELSNSEFDNNLGLENPDSLEQGQPFDLGKDSKINTEQK
HQTNLKNEYSRENLMQDYPKNLKHEPSGQLKEEDQANLDQNYNAKIDQEQ
STGLELKSQSTLDQEDQFNLNKEYQPNLDFTNPVNFEQEHQSNFDSEYQN
NFQKDHLTNWEKEHLANFDAGQSASLHQGEQQFNRNQKAPNVEGVDRSRQ
NEPIANEADPLDPNDRHQSSRTSLRKREQTEKQFEEHMPNEDDNKQASIK
DELMPLNTDLPKQEHLFDSESFIANNARDPPRYLIQMQDDYIQSENDSGE
RRLLEDRRESEALNMDKLTEEEPRTMEEFHLDSEYRRKKRENKNTDDSPE
KHI*

IP13384.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:20:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15115-PA 638 GF15115-PA 114..597 29..600 683 37.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:20:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21762-PA 632 GG21762-PA 1..591 1..600 2275 76.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG31805-PB 603 CG31805-PB 1..603 1..603 3193 100 Plus
CG31805-PC 641 CG31805-PC 1..600 1..600 3176 100 Plus
CG31805-PD 96 CG31805-PD 1..90 1..90 452 98.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:20:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14296-PA 488 GI14296-PA 1..219 1..227 213 34.8 Plus
Dmoj\GI14296-PA 488 GI14296-PA 286..447 408..600 174 30.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:20:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16052-PA 425 GL16052-PA 17..246 49..259 236 38.8 Plus
Dper\GL16052-PA 425 GL16052-PA 273..383 465..600 165 36.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:20:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26114-PA 423 GA26114-PA 5..244 39..259 253 38.3 Plus
Dpse\GA26114-PA 423 GA26114-PA 271..381 465..600 164 36.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:20:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17147-PA 616 GM17147-PA 1..593 1..600 2659 88.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:20:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21887-PA 639 GD21887-PA 1..598 1..600 2721 89.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16245-PA 503 GJ16245-PA 43..220 40..224 184 35.7 Plus
Dvir\GJ16245-PA 503 GJ16245-PA 373..462 502..600 166 42.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23879-PA 449 GK23879-PA 1..69 1..77 201 54.5 Plus
Dwil\GK23879-PA 449 GK23879-PA 330..445 481..600 188 41 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13152-PA 593 GE13152-PA 1..570 1..600 2136 74.3 Plus

IP13384.hyp Sequence

Translation from 12 to 1823

> IP13384.hyp
MFLLGICFICSLNPLVLNAFPVESQADSKDLSVLNAPLTDPADYPDLTNG
LTDAEVQESLKDLTLDDLNSLNKLLDERLGRDEDVDSDASLTTHGRQAMA
NIRKQDFQSMEVGLDDNCRDEEDSDETKPNLCTKRPTCPTTKRCSRKSTC
VPKTTRMCSTKSAYDSCKPKSGGFMDDDLISETTKSPKPKNKKCKKPKDD
FECEADDFLCQASRRSRGKESRNTLLDEEYIPGRPLTGNAQLGDELTSAL
NDQGEPLNDAQMELSNSEFDNNLGLENPDSLEQGQPFDLGKDSKINTEQK
HQTNLKNEYSRENLMQDYPKNLKHEPSGQLKEEDQANLDQNYNAKIDQEQ
STGLELKSQSTLDQEDQFNLNKEYQPNLDFTNPVNFEQEHQSNFDSEYQN
NFQKDHLTNWEKEHLANFDAGQSASLHQGEQQFNRNQKAPNVEGVDRSRQ
NEPIANEADPLDPNDRHQSSRTSLRKREQTEKQFEEHMPNEDDNKQASIK
DELMPLNTDLPKQEHLFDSESFIANNARDPPRYLIQMQDDYIQSENDSGE
RRLLEDRRESEALNMDKLTEEEPRTMEEFHLDSEYRRKKRENKNTDDSPE
KHI*

IP13384.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:58:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG31805-PB 603 CG31805-PB 1..603 1..603 3193 100 Plus
CG31805-PC 641 CG31805-PC 1..600 1..600 3176 100 Plus
CG31805-PD 96 CG31805-PD 1..90 1..90 452 98.9 Plus