Clone IP13724 Report

Search the DGRC for IP13724

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:137
Well:24
Vector:pOT2
Associated Gene/TranscriptSema-2b-RB
Protein status:IP13724.pep: gold
Preliminary Size:1851
Sequenced Size:4165

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4383 2005-01-01 Successful iPCR screen
CG33960 2008-04-29 Release 5.5 accounting
CG33960 2008-08-15 Release 5.9 accounting
CG33960 2008-12-18 5.12 accounting

Clone Sequence Records

IP13724.complete Sequence

4165 bp (4165 high quality bases) assembled on 2006-01-24

GenBank Submission: BT024285

> IP13724.complete
AACGGTCATCGTGTGCGGATGTTAAGCGGGAAAGTGGGAAATCGGAAAAG
CGCAGTCAGAAACCGAAACCCAGCTAAAGAAAACTCGTGCAACTCGCTAG
CAGTGCCCACGCAACAAACAAGAATAATAAATGCGAAATATATATGAAAA
ACACAGGTTTCAGTTTCAGTGACAAGTGTGCAACATAACTCAGCAGCAGT
GAGGTTTTTCACGAACTCACAGCCGAACCATCGCTACCAAGACGAGCGAA
GCCCAAAGCGAGTGTGTTTATTTAACACACTTCCTCGTTGCGAAAGTCTT
CAGTTCGTGTCTGCTGCTCGCGAAGTGCGCGCCACAGTGAAGAGGGAAAG
CGGAAACGGAAACGAATGCGTCGCAAGCGATAACGGAAACGGAAGCGAAG
GAACATGTGTGTGTGACGGGAAGATCTCTGCTACCCGAATTTAGAATAGA
TCGTATAGATCGCAGCCAATGCCGCTCAATGCCCAGTTAAAGATTGCTCA
ATCAGTGAACAAAGTGACATACGCGAAAGTCAGTGACTCAAACTGTTGTG
CTAAAAAGCAACAAAAATACTCTATTGCCGACTTTAGCCAGGCCAAAAGG
CAGGCAGGCAGCATGTGTGCCACGGGGAAAGGTAAGCACAGGCTCTGTAG
CCTCAGTGCCCTGCTCCTCGTCCTGGTCGCCCAAACAGTGCACGTGGAAT
ACGCCCGGGCGGATTATGAGAACACCTGGAATCTATATTACGAGCCGCCC
TGCTGCACGGGCTCATCTGCTGCCCATCATCTGCGCCACCACAAAGAACA
TGTGCAGGACTTCAGTTGCGGGCCGCTGCACTACAAGACTTTCTACATGG
ATGAGCGCAACAATGCGCTATATGTGGGCGCCATGGATCGCATATTTCGG
CTCAATCTGCGCAACATCAGCCAATCGATTTGTGAGCGCGATGTCCTCAT
CCTGGAGCCCACCGGATCGGATATCCTGAATTGTGTTTCCAAGGGTAAAC
GGGAGAAGGTGGAATGCCGAAATCACATAAGGGTTATCCAGCCGATGAAC
TTCAATGGCCAGAAGCTATATGTTTGCGGGACCAACGCCCACAATCCCAA
GGATTACGTAATAAACGCAAACTTAACACATTTACCCAGATCCCAGTACG
TGCCCGGCATTGGCCTGGGCATTGGCAAGTGTCCCTACGATCCTGCTGAC
AACTCAACCGCCGTCTATGTGGAGAACGGAAATCCCTTCGGCCTGCCCGC
CCTGTACGCCGGCACAAATGCCGAGTTCACCAAAGCGGATTCCGTCATAT
TCCGCTCGGACCTGTACAACCTGACGAATGGACGCAAGGAGGCCAACTTC
AAGAGAACCGTGAAGTACGACTCCAAGCTGCTGGACAAGCCCAACTTCGT
CGGCTCCTTTGAGATTGGTGAATTTGTGTACTTCTTCTTCCGCGAACATG
CCGTTGAGTACATAAATTGCGGAAAAGCCGTCTACTCCCGAGTGGCTCGG
GTGTGCAAAAACGACCGCGGTGGAAAATACATGATCAGCCAGAATTGGGC
CACGTATCTGAAGGCGCGGATGAACTGCAGCATCTCCAGCGAATTTCCCT
TCTACTTCAATGAGATACAATCCGTCTACAAGATGCCAACGGACGATACC
AAGTTCTATGCCACGTTCACAACGAATACGAATGGTCTGATTGGATCGGC
AGTGTGCAGCTACGACATCCGGGACATCAATGCGGCCTTCGACGGCAAAT
TCAAGGAGCAGGCCACCTCGAACAGCGCCTGGCTGCCCGTTCTGAACTCC
AAAGTGCCGGAGCCACGTCCTGGCACTTGCCACAACGACACCGCCACGCT
GCCGGACTCCGTGCTGAATTTCATTCGCAAACATCCGCTAATGGACAAGG
CGGTCGATCATGAATTTGGCAATCCGGTCTTCTTCAAGCGGGACGTCATA
CTCACCAAGCTGGTGGTGGACAAGATACGGATCGACAAGCTGAACCAGGA
GTTCCTAGTGTACTTTGTGGCCACGACGTCTGGCCACATCTACAAGATAG
TGCAGTTCATGCACTATGGCCAGCGGCACTCGAACCTGGTGGACATATTC
GAGGCCTCGCCGCACAGCGAACCCATACGGGAGATGACCCTCAGCCATAA
GACAGGATCCCTGTACGTGGCCACCGATCACCAGGTGAAGCAGATCGACA
TTGCCATGTGCGCCCGCCGATACGACAGCTGCTTCCGCTGCGTCTCGGAT
CCCTACTGCGGCTGGGACAAGGACGTCAATGCCTGCCGTCCCTACCAGCT
GGGTCTGCTGCAGGATGTGGCCAACGAGACGTCCGGAATCTGCGACACCA
GTGTGCTGCGCAAGAAGGTCACCTCCTCCTATGGCCAAACACTGCACCTT
TCCTGCTTTGTCAAAATGCCGGAAGTGCTGCGGAAGAAGCAGACACGCTG
GTACCATCACTCCACCGAAAAAGGACGCTATGAGGTGCGCTACACACCCA
CCAAATATATCGACACCAACGAGGGCGGTCTGGTCCTCCTGGCGGTGAAC
GAGGGCGACGGCGGGCGGTACGACAGCTACTTGGACGGCACCCTGCTCTG
CAGCTACGGCGTCACCGTGGACGCCCACAGATGCTCGCCGCCATCGCAGA
AGCAGGACTACCAGAAAATCTACTCGCATTGGTGCAACGAGTTCGAGAAA
TACAAATCGGCCATGAAGCAGTGGCAGGCCAAACAGGAGCAATGCGGCCT
CAAGGACAAAACAGGACCAATCAGCAGCAATGGAAAGCATGTGAATGATG
TGTTCAGCAACGATGCTTTGGTCTGACCCAGAAAGTACTTGTACAGCTTT
GAGTTCTTGTCGTCGGCGACGGAGGGCGTGGCCAGCGCCCACCGCAAATT
GTACATTTTCGTGTTCGTGCTTACCATATTTGCTCGCTTCTAAAGTTTCT
AGTTAAAATGTAAATGCGCAGAAAAGCAGTAAGCAAACGAGGAAAATGTG
AAGAACAAGTATAAAAATGGGACAAGAGCCGAGCTGAGGAAAAACTATGA
GTAAAGAAAATGATTACAGAATGGAAAAACAACCACTACAAAGACTGAAA
TTTTTAAGCTTTTAAAATCGACAATATTTCTAATAATTTCGATGCGTTTT
TTTTGGTCATGCTTTCGTTTCGTTTTGAGATGTTGTCAGCGTCAAACTGA
ATAATTTTCGACATTAACTAACTGATATACAAAGATGGAGTAAACGAGAA
AAGTTACTAGCAAAAGGATCCTGCCATAAGTCAAATGGAAATTACGGTTT
TACACTCACACAAAGACACACCTACAGAAGAAACTATTTCTATTTCGAGC
TAAGGTTAAGCTAATCTAACGATACGGATACAGATATGGATATGGATACG
GATACAGAAACCGAAAAAGATACAGATACGGATACAGATTGAGAAACAGA
CACAGATGGAACTGCAACCACCTAAGTGAGAATCTGACCTAAGGCAATGT
ATTTACACCAAGCTCATGAGGCGCAACGCAACGATTCGATTATGTTTTCC
ATTTGGTTCAGTTTCCGGCAACTCGTCGCTTGGCCATTTCGGGTTTGGGG
TTGGGAAGATCTTAAACGAATTTGTATATTACTTAGCCATATTTGTTCGA
CTAAACTAGCCTAAGATATACATATACACGATTAGCAGTCCCTGTTTAGG
TCATAGACATGTACCGAACCAACTTAATACGATAGCCAAAACCAGAAACG
GAAATAAAGTTTCGGAAAACAAATGACGCACAGCATGAACGGCTATATGG
GATATGAAACTATTTAGCTTAGGGCGACTTGTACATAGACGAGCTTTAGA
TGATAAGTATGAACCAGCGTTAGTTTTGATTTTTACTCGGCTACGATTAT
GATTTGGAATTCTCTATTCGGCATTAACTCGCTCTTGTATAGATTGTGCG
TTGGCCTAATGTTTACGATAAGCAATACATAGTTATATATGCATATGCGT
AATTATAAATAAATATAGACACATGAAGTTACTGCATTGAGACCAACATG
CTCATGGTTACTTACCCGTACTTAGCGTAGGTAAGTTGATGTGTGGCGCG
TCATTTTTTTTAGTAATATTGCAGAAATTCATTCTCACGAAAAAAAAACA
AAAAAAAAAAAAAAA

IP13724.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG33960.c 4639 CG33960.c 24..4189 1..4165 20745 99.9 Plus
CG33960-RB 4178 CG33960-RB 24..4178 1..4154 20735 99.9 Plus
CG33960.e 4269 CG33960.e 24..2853 1..2833 14095 99.8 Plus
CG33960.e 4269 CG33960.e 2854..4054 2966..4165 5920 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:40:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 12316866..12318048 2966..4149 5825 99.7 Plus
chr2R 21145070 chr2R 12286115..12286709 202..796 2915 99.3 Plus
chr2R 21145070 chr2R 12313782..12314285 1974..2477 2520 100 Plus
chr2R 21145070 chr2R 12311582..12311939 1388..1745 1775 99.7 Plus
chr2R 21145070 chr2R 12313027..12313257 1744..1974 1155 100 Plus
chr2R 21145070 chr2R 12273862..12274060 1..205 840 95.1 Plus
chr2R 21145070 chr2R 12315044..12315197 2477..2630 770 100 Plus
chr2R 21145070 chr2R 12310748..12310885 1117..1254 690 100 Plus
chr2R 21145070 chr2R 12311324..12311457 1254..1387 670 100 Plus
chr2R 21145070 chr2R 12316618..12316750 2834..2966 665 100 Plus
chr2R 21145070 chr2R 12310309..12310422 1004..1117 570 100 Plus
chr2R 21145070 chr2R 12315708..12315819 2628..2739 560 100 Plus
chr2R 21145070 chr2R 12316014..12316109 2738..2833 480 100 Plus
chr2R 21145070 chr2R 12307576..12307666 795..885 455 100 Plus
chr2R 21145070 chr2R 12416644..12416960 1393..1709 415 75.4 Plus
chr2R 21145070 chr2R 12309975..12310045 935..1005 355 100 Plus
chr2R 21145070 chr2R 12418204..12418346 2172..2314 310 81.1 Plus
chr2R 21145070 chr2R 12308974..12309029 881..936 265 98.2 Plus
chr2R 21145070 chr2R 12419099..12419161 2656..2718 210 88.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:20:36 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:40:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16429579..16430779 2966..4165 5910 99.7 Plus
2R 25286936 2R 16398827..16399421 202..796 2975 100 Plus
2R 25286936 2R 16426495..16426998 1974..2477 2520 100 Plus
2R 25286936 2R 16424295..16424652 1388..1745 1790 100 Plus
2R 25286936 2R 16425740..16425970 1744..1974 1155 100 Plus
2R 25286936 2R 16386548..16386752 1..205 1025 100 Plus
2R 25286936 2R 16427757..16427910 2477..2630 770 100 Plus
2R 25286936 2R 16423451..16423588 1117..1254 690 100 Plus
2R 25286936 2R 16424037..16424170 1254..1387 670 100 Plus
2R 25286936 2R 16429331..16429463 2834..2966 665 100 Plus
2R 25286936 2R 16423012..16423125 1004..1117 570 100 Plus
2R 25286936 2R 16428421..16428532 2628..2739 560 100 Plus
2R 25286936 2R 16428727..16428822 2738..2833 480 100 Plus
2R 25286936 2R 16420279..16420369 795..885 455 100 Plus
2R 25286936 2R 16529364..16529680 1393..1709 415 75.4 Plus
2R 25286936 2R 16422678..16422748 935..1005 355 100 Plus
2R 25286936 2R 16530924..16531066 2172..2314 310 81.1 Plus
2R 25286936 2R 16421677..16421732 881..936 265 98.2 Plus
2R 25286936 2R 16531819..16531881 2656..2718 210 88.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:12:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 16430778..16431978 2966..4165 5920 99.6 Plus
2R 25260384 2R 16400026..16400620 202..796 2975 100 Plus
2R 25260384 2R 16427694..16428197 1974..2477 2520 100 Plus
2R 25260384 2R 16425494..16425851 1388..1745 1790 100 Plus
2R 25260384 2R 16426939..16427169 1744..1974 1155 100 Plus
2R 25260384 2R 16387747..16387951 1..205 1025 100 Plus
2R 25260384 2R 16428956..16429109 2477..2630 770 100 Plus
2R 25260384 2R 16424650..16424787 1117..1254 690 100 Plus
2R 25260384 2R 16425236..16425369 1254..1387 670 100 Plus
2R 25260384 2R 16430530..16430662 2834..2966 665 100 Plus
2R 25260384 2R 16424211..16424324 1004..1117 570 100 Plus
2R 25260384 2R 16429620..16429731 2628..2739 560 100 Plus
2R 25260384 2R 16429926..16430021 2738..2833 480 100 Plus
2R 25260384 2R 16421478..16421568 795..885 455 100 Plus
2R 25260384 2R 16423877..16423947 935..1005 355 100 Plus
2R 25260384 2R 16532123..16532265 2172..2314 310 81.1 Plus
2R 25260384 2R 16422876..16422931 881..936 265 98.2 Plus
2R 25260384 2R 16530709..16530807 1539..1637 240 82.8 Plus
X 23527363 X 21456975..21457061 3371..3457 210 82.7 Plus
X 23527363 X 21456819..21456905 3371..3457 210 82.7 Plus
X 23527363 X 21456987..21457073 3371..3457 210 82.7 Plus
X 23527363 X 21456981..21457067 3371..3457 210 82.7 Plus
X 23527363 X 21457017..21457103 3371..3457 210 82.7 Plus
X 23527363 X 21457011..21457097 3371..3457 210 82.7 Plus
X 23527363 X 21457005..21457091 3371..3457 210 82.7 Plus
X 23527363 X 21456999..21457085 3371..3457 210 82.7 Plus
X 23527363 X 21456993..21457079 3371..3457 210 82.7 Plus
X 23527363 X 21457203..21457289 3371..3457 210 82.7 Plus
X 23527363 X 21457185..21457271 3371..3457 210 82.7 Plus
X 23527363 X 21457179..21457265 3371..3457 210 82.7 Plus
X 23527363 X 21457173..21457259 3371..3457 210 82.7 Plus
X 23527363 X 21457167..21457253 3371..3457 210 82.7 Plus
X 23527363 X 21457071..21457157 3371..3457 210 82.7 Plus
X 23527363 X 21457065..21457151 3371..3457 210 82.7 Plus
X 23527363 X 21457059..21457145 3371..3457 210 82.7 Plus
X 23527363 X 21457053..21457139 3371..3457 210 82.7 Plus
X 23527363 X 21457047..21457133 3371..3457 210 82.7 Plus
X 23527363 X 21457041..21457127 3371..3457 210 82.7 Plus
X 23527363 X 21457035..21457121 3371..3457 210 82.7 Plus
X 23527363 X 21457029..21457115 3371..3457 210 82.7 Plus
X 23527363 X 21457023..21457109 3371..3457 210 82.7 Plus
X 23527363 X 21456813..21456899 3371..3457 210 82.7 Plus
X 23527363 X 21456807..21456893 3371..3457 210 82.7 Plus
X 23527363 X 21456801..21456887 3371..3457 210 82.7 Plus
X 23527363 X 21456795..21456881 3371..3457 210 82.7 Plus
X 23527363 X 21456789..21456875 3371..3457 210 82.7 Plus
X 23527363 X 21456783..21456869 3371..3457 210 82.7 Plus
X 23527363 X 21456777..21456863 3371..3457 210 82.7 Plus
X 23527363 X 21456771..21456857 3371..3457 210 82.7 Plus
X 23527363 X 21456765..21456851 3371..3457 210 82.7 Plus
X 23527363 X 21456759..21456845 3371..3457 210 82.7 Plus
X 23527363 X 21456753..21456839 3371..3457 210 82.7 Plus
X 23527363 X 21456747..21456833 3371..3457 210 82.7 Plus
X 23527363 X 21456741..21456827 3371..3457 210 82.7 Plus
X 23527363 X 21456735..21456821 3371..3457 210 82.7 Plus
X 23527363 X 21456729..21456815 3371..3457 210 82.7 Plus
X 23527363 X 21456723..21456809 3371..3457 210 82.7 Plus
X 23527363 X 21456717..21456803 3371..3457 210 82.7 Plus
X 23527363 X 21456711..21456797 3371..3457 210 82.7 Plus
X 23527363 X 21456705..21456791 3371..3457 210 82.7 Plus
X 23527363 X 21456699..21456785 3371..3457 210 82.7 Plus
X 23527363 X 15556699..15556785 3371..3457 210 82.7 Plus
X 23527363 X 15556693..15556779 3371..3457 210 82.7 Plus
X 23527363 X 15556687..15556773 3371..3457 210 82.7 Plus
X 23527363 X 15556681..15556767 3371..3457 210 82.7 Plus
X 23527363 X 15556675..15556761 3371..3457 210 82.7 Plus
X 23527363 X 15556669..15556755 3371..3457 210 82.7 Plus
X 23527363 X 15556663..15556749 3371..3457 210 82.7 Plus
X 23527363 X 15556657..15556743 3371..3457 210 82.7 Plus
2R 25260384 2R 16533018..16533080 2656..2718 210 88.8 Plus
2R 25260384 2R 16530563..16530678 1393..1508 205 78.4 Plus
2R 25260384 2R 16530146..16530216 1165..1235 175 83 Plus
2R 25260384 2R 16529797..16529838 1065..1106 165 92.8 Plus
2R 25260384 2R 16531448..16531578 1744..1874 160 74.8 Plus
2R 25260384 2R 16530306..16530368 1254..1316 150 82.5 Plus
Blast to na_te.dros performed on 2019-03-15 21:40:44 has no hits.

IP13724.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:41:33 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 12313028..12313256 1745..1973 100 -> Plus
chr2R 12273862..12274058 1..203 95 -> Plus
chr2R 12286117..12286709 204..796 99 -> Plus
chr2R 12307578..12307665 797..884 100 -> Plus
chr2R 12308978..12309029 885..936 100 -> Plus
chr2R 12309977..12310045 937..1005 100 -> Plus
chr2R 12310311..12310421 1006..1116 100 -> Plus
chr2R 12310748..12310885 1117..1254 100 -> Plus
chr2R 12311325..12311457 1255..1387 100 -> Plus
chr2R 12311582..12311938 1388..1744 99 -> Plus
chr2R 12313782..12314285 1974..2477 100 -> Plus
chr2R 12315045..12315197 2478..2630 100 -> Plus
chr2R 12315711..12315819 2631..2739 100 -> Plus
chr2R 12316016..12316109 2740..2833 100 -> Plus
chr2R 12316618..12316749 2834..2965 100 -> Plus
chr2R 12316866..12317270 2966..3370 99 == Plus
chr2R 12317340..12318048 3440..4149 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:36:16 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
CG33960-RB 1..2358 469..2826 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:34:59 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
CG33960-RB 1..2358 469..2826 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:55:51 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2b-RD 1..2475 469..2943 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:09:24 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
CG33960-RB 1..2358 469..2826 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:00:41 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2b-RD 1..2475 469..2943 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:36:13 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
CG33960-RB 1..4150 1..4149 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:34:59 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
CG33960-RB 1..4150 1..4149 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:55:51 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2b-RB 25..4174 1..4149 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:09:25 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
CG33960-RB 1..4150 1..4149 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:00:41 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
Sema-2b-RB 25..4174 1..4149 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:41:33 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16386548..16386750 1..203 100 -> Plus
2R 16428424..16428532 2631..2739 100 -> Plus
2R 16428729..16428822 2740..2833 100 -> Plus
2R 16429331..16429462 2834..2965 100 -> Plus
2R 16398829..16399421 204..796 100 -> Plus
2R 16420281..16420368 797..884 100 -> Plus
2R 16421681..16421732 885..936 100 -> Plus
2R 16422680..16422748 937..1005 100 -> Plus
2R 16423014..16423124 1006..1116 100 -> Plus
2R 16423451..16423588 1117..1254 100 -> Plus
2R 16424038..16424170 1255..1387 100 -> Plus
2R 16424295..16424651 1388..1744 100 -> Plus
2R 16425741..16425969 1745..1973 100 -> Plus
2R 16426495..16426998 1974..2477 100 -> Plus
2R 16427758..16427910 2478..2630 100 -> Plus
2R 16429579..16430763 2966..4149 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:41:33 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16386548..16386750 1..203 100 -> Plus
2R 16428424..16428532 2631..2739 100 -> Plus
2R 16428729..16428822 2740..2833 100 -> Plus
2R 16429331..16429462 2834..2965 100 -> Plus
2R 16398829..16399421 204..796 100 -> Plus
2R 16420281..16420368 797..884 100 -> Plus
2R 16421681..16421732 885..936 100 -> Plus
2R 16422680..16422748 937..1005 100 -> Plus
2R 16423014..16423124 1006..1116 100 -> Plus
2R 16423451..16423588 1117..1254 100 -> Plus
2R 16424038..16424170 1255..1387 100 -> Plus
2R 16424295..16424651 1388..1744 100 -> Plus
2R 16425741..16425969 1745..1973 100 -> Plus
2R 16426495..16426998 1974..2477 100 -> Plus
2R 16427758..16427910 2478..2630 100 -> Plus
2R 16429579..16430763 2966..4149 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:41:33 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16386548..16386750 1..203 100 -> Plus
2R 16428424..16428532 2631..2739 100 -> Plus
2R 16428729..16428822 2740..2833 100 -> Plus
2R 16429331..16429462 2834..2965 100 -> Plus
2R 16398829..16399421 204..796 100 -> Plus
2R 16420281..16420368 797..884 100 -> Plus
2R 16421681..16421732 885..936 100 -> Plus
2R 16422680..16422748 937..1005 100 -> Plus
2R 16423014..16423124 1006..1116 100 -> Plus
2R 16423451..16423588 1117..1254 100 -> Plus
2R 16424038..16424170 1255..1387 100 -> Plus
2R 16424295..16424651 1388..1744 100 -> Plus
2R 16425741..16425969 1745..1973 100 -> Plus
2R 16426495..16426998 1974..2477 100 -> Plus
2R 16427758..16427910 2478..2630 100 -> Plus
2R 16429579..16430763 2966..4149 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:55:51 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12313246..12313474 1745..1973 100 -> Plus
arm_2R 12274053..12274255 1..203 100 -> Plus
arm_2R 12286334..12286926 204..796 100 -> Plus
arm_2R 12307786..12307873 797..884 100 -> Plus
arm_2R 12309186..12309237 885..936 100 -> Plus
arm_2R 12310185..12310253 937..1005 100 -> Plus
arm_2R 12310519..12310629 1006..1116 100 -> Plus
arm_2R 12310956..12311093 1117..1254 100 -> Plus
arm_2R 12311543..12311675 1255..1387 100 -> Plus
arm_2R 12311800..12312156 1388..1744 100 -> Plus
arm_2R 12314000..12314503 1974..2477 100 -> Plus
arm_2R 12315263..12315415 2478..2630 100 -> Plus
arm_2R 12315929..12316037 2631..2739 100 -> Plus
arm_2R 12316234..12316327 2740..2833 100 -> Plus
arm_2R 12316836..12316967 2834..2965 100 -> Plus
arm_2R 12317084..12318268 2966..4149 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:58:54 Download gff for IP13724.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16387747..16387949 1..203 100 -> Plus
2R 16429623..16429731 2631..2739 100 -> Plus
2R 16429928..16430021 2740..2833 100 -> Plus
2R 16430530..16430661 2834..2965 100 -> Plus
2R 16400028..16400620 204..796 100 -> Plus
2R 16421480..16421567 797..884 100 -> Plus
2R 16422880..16422931 885..936 100 -> Plus
2R 16423879..16423947 937..1005 100 -> Plus
2R 16424213..16424323 1006..1116 100 -> Plus
2R 16424650..16424787 1117..1254 100 -> Plus
2R 16425237..16425369 1255..1387 100 -> Plus
2R 16425494..16425850 1388..1744 100 -> Plus
2R 16426940..16427168 1745..1973 100 -> Plus
2R 16427694..16428197 1974..2477 100 -> Plus
2R 16428957..16429109 2478..2630 100 -> Plus
2R 16430778..16431962 2966..4149 99   Plus

IP13724.pep Sequence

Translation from 468 to 2825

> IP13724.pep
MPLNAQLKIAQSVNKVTYAKVSDSNCCAKKQQKYSIADFSQAKRQAGSMC
ATGKGKHRLCSLSALLLVLVAQTVHVEYARADYENTWNLYYEPPCCTGSS
AAHHLRHHKEHVQDFSCGPLHYKTFYMDERNNALYVGAMDRIFRLNLRNI
SQSICERDVLILEPTGSDILNCVSKGKREKVECRNHIRVIQPMNFNGQKL
YVCGTNAHNPKDYVINANLTHLPRSQYVPGIGLGIGKCPYDPADNSTAVY
VENGNPFGLPALYAGTNAEFTKADSVIFRSDLYNLTNGRKEANFKRTVKY
DSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDR
GGKYMISQNWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYATF
TTNTNGLIGSAVCSYDIRDINAAFDGKFKEQATSNSAWLPVLNSKVPEPR
PGTCHNDTATLPDSVLNFIRKHPLMDKAVDHEFGNPVFFKRDVILTKLVV
DKIRIDKLNQEFLVYFVATTSGHIYKIVQFMHYGQRHSNLVDIFEASPHS
EPIREMTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFRCVSDPYCGWD
KDVNACRPYQLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKM
PEVLRKKQTRWYHHSTEKGRYEVRYTPTKYIDTNEGGLVLLAVNEGDGGR
YDSYLDGTLLCSYGVTVDAHRCSPPSQKQDYQKIYSHWCNEFEKYKSAMK
QWQAKQEQCGLKDKTGPISSNGKHVNDVFSNDALV*

IP13724.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:19:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13596-PA 742 GF13596-PA 1..742 49..785 3878 95.4 Plus
Dana\GF13604-PA 721 GF13604-PA 24..716 81..779 2730 68.8 Plus
Dana\GF15536-PA 917 GF15536-PA 113..594 121..609 863 38.7 Plus
Dana\GF13235-PA 753 GF13235-PA 51..525 127..607 778 37 Plus
Dana\GF10396-PA 1088 GF10396-PA 67..521 122..608 686 33.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:19:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20603-PA 783 GG20603-PA 1..783 1..785 4142 97.5 Plus
Dere\GG20610-PA 697 GG20610-PA 29..692 110..779 2624 69.3 Plus
Dere\GG25296-PA 902 GG25296-PA 100..581 121..609 861 38.5 Plus
Dere\GG21030-PA 769 GG21030-PA 64..537 127..607 783 37.7 Plus
Dere\GG13858-PA 1097 GG13858-PA 73..530 122..608 703 34.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:19:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21236-PA 735 GH21236-PA 1..735 59..785 3733 92.7 Plus
Dgri\GH21241-PA 701 GH21241-PA 33..696 110..779 2607 68.7 Plus
Dgri\GH21142-PA 762 GH21142-PA 44..528 121..607 790 36.2 Plus
Dgri\GH11272-PA 774 GH11272-PA 123..483 262..609 764 43.3 Plus
Dgri\GH16920-PA 1061 GH16920-PA 40..506 122..615 735 35.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:17
Subject Length Description Subject Range Query Range Score Percent Strand
Sema2b-PD 824 CG33960-PD 1..785 1..785 4232 100 Plus
Sema2b-PB 785 CG33960-PB 1..785 1..785 4232 100 Plus
Sema2b-PA 784 CG33960-PA 1..784 1..785 4215 99.9 Plus
Sema2b-PC 784 CG33960-PC 1..784 1..785 4215 99.9 Plus
Sema2a-PE 724 CG4700-PE 3..719 59..779 2722 67.4 Plus
Sema2a-PA 724 CG4700-PA 3..719 59..779 2722 67.4 Plus
Sema2a-PB 724 CG4700-PB 3..719 59..779 2722 67.4 Plus
Sema2a-PC 697 CG4700-PC 29..692 110..779 2609 69.1 Plus
Sema1a-PI 817 CG18405-PI 96..577 121..609 845 38.5 Plus
Sema1a-PH 820 CG18405-PH 96..577 121..609 845 38.5 Plus
Sema1a-PF 826 CG18405-PF 96..577 121..609 845 38.5 Plus
Sema1a-PA 899 CG18405-PA 96..577 121..609 845 38.5 Plus
Sema1a-PE 905 CG18405-PE 96..577 121..609 845 38.5 Plus
Sema1a-PD 905 CG18405-PD 96..577 121..609 845 38.5 Plus
Sema1a-PG 1131 CG18405-PG 96..577 121..609 845 38.5 Plus
Sema1b-PC 770 CG6446-PC 64..538 127..607 755 36.3 Plus
Sema1b-PB 770 CG6446-PB 64..538 127..607 755 36.3 Plus
Sema1b-PA 770 CG6446-PA 64..538 127..607 755 36.3 Plus
Sema5c-PB 1091 CG5661-PB 71..524 122..608 672 34.7 Plus
Sema5c-PA 1093 CG5661-PA 73..526 122..608 672 34.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20523-PA 749 GI20523-PA 19..749 72..785 3685 92.5 Plus
Dmoj\GI20528-PA 720 GI20528-PA 23..715 81..779 2710 68.1 Plus
Dmoj\GI21441-PA 865 GI21441-PA 62..541 121..607 899 40 Plus
Dmoj\GI18743-PA 782 GI18743-PA 70..547 127..607 803 37.5 Plus
Dmoj\GI13674-PA 1081 GI13674-PA 64..539 122..625 700 34.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10746-PA 658 GL10746-PA 19..653 76..779 2308 61 Plus
Dper\GL10736-PA 465 GL10736-PA 44..462 71..489 2227 95.5 Plus
Dper\GL10737-PA 206 GL10737-PA 1..206 580..785 1092 95.1 Plus
Dper\GL25556-PA 905 GL25556-PA 107..579 132..609 878 39.5 Plus
Dper\GL17680-PA 773 GL17680-PA 68..542 127..607 784 37.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:19:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30014-PB 766 GA30014-PB 41..757 71..785 3715 93.6 Plus
Dpse\GA24470-PA 722 GA24470-PA 19..717 76..779 2723 68.4 Plus
Dpse\Sema-1a-PA 838 GA14922-PA 31..512 121..609 877 39.3 Plus
Dpse\GA19600-PA 774 GA19600-PA 69..543 127..607 783 37.5 Plus
Dpse\GA23503-PA 1094 GA23503-PA 72..529 122..611 700 33.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:19:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21695-PA 784 GM21695-PA 1..784 1..785 4230 99.1 Plus
Dsec\GM21705-PA 697 GM21705-PA 29..692 110..779 2623 69.3 Plus
Dsec\GM17077-PA 897 GM17077-PA 96..577 121..609 859 38.5 Plus
Dsec\GM19960-PA 770 GM19960-PA 64..538 127..607 775 37.2 Plus
Dsec\GM24682-PA 1378 GM24682-PA 354..811 122..608 696 34.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11191-PA 784 GD11191-PA 1..784 1..785 4230 99.2 Plus
Dsim\GD11202-PA 697 GD11202-PA 29..692 110..779 2627 69.4 Plus
Dsim\GD23556-PA 897 GD23556-PA 96..577 121..609 859 38.5 Plus
Dsim\GD25452-PA 579 GD25452-PA 64..538 127..607 772 36.6 Plus
Dsim\GD12751-PA 1097 GD12751-PA 73..530 122..608 705 34.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:19:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22373-PA 744 GJ22373-PA 2..744 49..785 3727 92.2 Plus
Dvir\GJ22377-PA 701 GJ22377-PA 33..696 110..779 2624 69 Plus
Dvir\GJ11247-PA 868 GJ11247-PA 62..541 121..607 895 40 Plus
Dvir\GJ21763-PA 757 GJ21763-PA 46..522 125..607 806 37 Plus
Dvir\GJ14011-PA 1098 GJ14011-PA 72..532 122..609 697 33.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:19:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21697-PA 731 GK21697-PA 20..731 75..785 3736 95.5 Plus
Dwil\GK21702-PA 721 GK21702-PA 24..716 81..779 2743 69 Plus
Dwil\GK18750-PA 851 GK18750-PA 47..526 121..607 877 39.4 Plus
Dwil\GK15918-PA 775 GK15918-PA 70..539 127..607 781 37 Plus
Dwil\GK17220-PA 1098 GK17220-PA 61..522 122..611 658 33.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:19:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11790-PA 783 GE11790-PA 1..783 1..785 4200 98.7 Plus
Dyak\GE11800-PA 697 GE11800-PA 29..692 110..779 2624 69.3 Plus
Dyak\GE18787-PA 901 GE18787-PA 98..579 121..609 860 38.5 Plus
Dyak\GE13973-PA 770 GE13973-PA 64..538 127..607 778 37 Plus
Dyak\GE20151-PA 1088 GE20151-PA 64..521 122..608 697 34.5 Plus

IP13724.hyp Sequence

Translation from 468 to 2825

> IP13724.hyp
MPLNAQLKIAQSVNKVTYAKVSDSNCCAKKQQKYSIADFSQAKRQAGSMC
ATGKGKHRLCSLSALLLVLVAQTVHVEYARADYENTWNLYYEPPCCTGSS
AAHHLRHHKEHVQDFSCGPLHYKTFYMDERNNALYVGAMDRIFRLNLRNI
SQSICERDVLILEPTGSDILNCVSKGKREKVECRNHIRVIQPMNFNGQKL
YVCGTNAHNPKDYVINANLTHLPRSQYVPGIGLGIGKCPYDPADNSTAVY
VENGNPFGLPALYAGTNAEFTKADSVIFRSDLYNLTNGRKEANFKRTVKY
DSKLLDKPNFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDR
GGKYMISQNWATYLKARMNCSISSEFPFYFNEIQSVYKMPTDDTKFYATF
TTNTNGLIGSAVCSYDIRDINAAFDGKFKEQATSNSAWLPVLNSKVPEPR
PGTCHNDTATLPDSVLNFIRKHPLMDKAVDHEFGNPVFFKRDVILTKLVV
DKIRIDKLNQEFLVYFVATTSGHIYKIVQFMHYGQRHSNLVDIFEASPHS
EPIREMTLSHKTGSLYVATDHQVKQIDIAMCARRYDSCFRCVSDPYCGWD
KDVNACRPYQLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKM
PEVLRKKQTRWYHHSTEKGRYEVRYTPTKYIDTNEGGLVLLAVNEGDGGR
YDSYLDGTLLCSYGVTVDAHRCSPPSQKQDYQKIYSHWCNEFEKYKSAMK
QWQAKQEQCGLKDKTGPISSNGKHVNDVFSNDALV*

IP13724.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:00:25
Subject Length Description Subject Range Query Range Score Percent Strand
Sema-2b-PD 824 CG33960-PD 1..785 1..785 4232 100 Plus
Sema-2b-PB 785 CG33960-PB 1..785 1..785 4232 100 Plus
Sema-2b-PA 784 CG33960-PA 1..784 1..785 4215 99.9 Plus
Sema-2b-PC 784 CG33960-PC 1..784 1..785 4215 99.9 Plus
Sema-2a-PE 724 CG4700-PE 3..719 59..779 2722 67.4 Plus