Clone IP13869 Report

Search the DGRC for IP13869

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:138
Well:69
Vector:pOT2
Associated Gene/TranscriptCG9168-RA
Protein status:IP13869.pep: gold
Preliminary Size:1803
Sequenced Size:1976

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9168 2005-01-01 Successful iPCR screen
CG9168 2008-04-29 Release 5.5 accounting
CG9168 2008-08-15 Release 5.9 accounting
CG9168 2008-12-18 5.12 accounting

Clone Sequence Records

IP13869.complete Sequence

1976 bp (1976 high quality bases) assembled on 2005-04-11

GenBank Submission: BT022768

> IP13869.complete
CTGGGAAGAAATGTCTTCTTACTGTGTAGCATTCAGTTTTTATTATGCAA
AGCCAAATTGAGTCTACACTCTCACTATCCAAATGTTGCAAAAACTTTGG
AAAACAAAAAGTTTTACGTTGACAGCCCATCGTGCAAAATGCCCGAAATG
GATCCTTTTTCCGCTGACATTATGAGATTCTTTAAACGAAGGCAGTTCAG
AGAGTGTAGCAGCGATAAAGATTTGCTAATAAGTGAGTTCGATTCGCATC
TACGACAATACAGGATCAAAATTGATGAGAACTCTGCTCAGCAGCATTTA
AAGAAGTTCGGCAATGCAACACTCAAGTGCGAATATCAGGTGATAGGTCG
CAATAAAAAAGACTCGTTTCCGGATAATCATTTTAGTTTTTCCAAACTAC
AACCCTTGAGTCAATCCTTTCTGGTACCAAAGACAATAGACTTTATATCC
ACCCAATGCCATGCCGTTCATGGAAACATCGATTTGAAGCTTCTGCAGAA
GGACGCCTTTCTATTTGTACAGGATCGCCTGAATCACGAGCATAAGAACA
CGGAGCATCATCGTCCAGATTTGCAATCCAAGCCGAATGTGATCATCCTG
GGCATTGATTCCACATCCCGCATGAACCTGAGACGCTCCATGCCCAAGGT
TCACAAATTCTTGCAAAGACCAGGATGGTTTGAGATGCAGGGTTACAATA
AGGTCGGTGAAAATACGCTGCCCAATCTTTTGGCCATACTCACTGGAAAT
GCCGAGGAAAACGCTCTATTCAATGGTCGATTTGGGCACAGCGGATTCAT
TGACAAACTAAAGTTCATTTGGCAGCTGTTCAAGAAGAATGGCTACATGA
CAGCTTTTGGAGAAGACTGCGCTAAGATTAACACATTTAACTACCAGAAG
CCAGGATTTAAGCAACAGCCAGTGGATTTTTATCTTAGAAACTTTATTGT
GGCTTTGGAAACTATTTTAAAGACGAGGCGCGAGTTTGGAAATGTTTTCT
GCCTGGGACGAAAGTTGGGTTTCCAATACGTATTCGACTTTGCCAGGCAG
TTTATGCAACGCTTTGAGAATTCAGCACCCGTATTTGGAATCTTCTGGAG
CAATAGTTTCACCCATGAGGATTTCCTAGGAGCCACTGCCTTGGATCACG
TATTCTTGGAATACCTTACGTTGTACGATGAACTTGGCTTTTTCAATCGT
TCAATAGTAATGGTGTTGAGTGACCATGGCTATAGATATGGTGTGACTCG
ACAGGCTTCCAAATCGGGTTATCTGGAAGAACGTCTTCCACTAATGTTCA
TACATGTTCCTCCATGGTTCAGAAAGATATATCCCCAGTATGTGGAAAAC
CTGAAGATCAACCAGAATCGCCTGTCCTCAGGCTTTGATCTCCACATGAC
CCTACACCATCTGCTCCACCTGAATGCCACTTCTATGGCGGATTTCAGTC
CAAAGCTTCAGGCATCGCAGTGTAAAATGTGCCAATCCCTGTTCTTCCAA
CTTCCGGCTAACAGAAACTGTTCTCATGCGGGAATCCGTGAAAAGTGGTG
TTCCTGCGAACCCACTGAAACGGTAACCAACCAAAGGCTCCTCAGAAAAG
TGGCTCAAGAGGTGGTGCATCATATGAATCGGCATTTGCGGGATCGAAAC
CTCACTACGCTTTGCCAGAATTACGCTTTAAAGAAGGTCCTTTACTTGGA
TAGCAAAATCTCATTGAGCGAAGACTCAGTCGAGGACGAACAGCTGCACA
CCTACATAATCACATTCGAAACCAATCCGAGTTCAGCGCATTTCGAGGCC
ACTGTACAGTGGAACTCGGAAAAGGAAACCTTGAACATGAATGTGGACGA
GCTGAGTCGATTGGAATCCTACGAGAAGCATAGCAAGTGCACAAGAGATC
CAATAATCAAGAAATATTGTATATGCAAAGAATTTAAATAAATATTCTAT
CCAAAAAAAAAAAAAAAAAAAAAAAA

IP13869.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:36:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG9168-RA 1965 CG9168-RA 3..1959 1..1957 9785 100 Plus
CG10730-RA 2067 CG10730-RA 604..760 579..735 200 75.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:32:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1411095..1412662 385..1952 7570 98.9 Plus
chr3L 24539361 chr3L 1410661..1411046 1..386 1885 99.2 Plus
chr2L 23010047 chr2L 20069728..20069884 735..579 185 74.5 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:21:03 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:32:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1411522..1413094 385..1957 7865 100 Plus
3L 28110227 3L 1411088..1411473 1..386 1930 100 Plus
2L 23513712 2L 20071360..20071516 735..579 200 75.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 1411522..1413094 385..1957 7865 100 Plus
3L 28103327 3L 1411088..1411473 1..386 1930 100 Plus
2L 23513712 2L 20071360..20071516 735..579 200 75.1 Minus
Blast to na_te.dros performed 2019-03-16 03:32:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 814..886 31..103 113 61.6 Plus
TART-C 11124 TART-C TARTC 11124bp 2267..2339 31..103 113 61.6 Plus

IP13869.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:33:57 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1410661..1411046 1..386 99 -> Plus
chr3L 1411097..1412662 387..1952 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:55:59 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
CG9168-RA 1..1803 139..1941 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:02:12 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
CG9168-RA 1..1803 139..1941 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:59:18 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
CG9168-RA 1..1803 139..1941 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:45:21 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
CG9168-RA 1..1803 139..1941 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:08:09 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
CG9168-RA 1..1803 139..1941 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:46:46 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
CG9168-RA 1..1803 139..1941 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:02:12 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
CG9168-RA 1..1952 1..1952 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:59:18 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
CG9168-RA 1..1952 1..1952 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:45:21 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
CG9168-RA 1..1803 139..1941 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:08:09 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
CG9168-RA 1..1952 1..1952 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:33:57 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1411088..1411473 1..386 100 -> Plus
3L 1411524..1413089 387..1952 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:33:57 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1411088..1411473 1..386 100 -> Plus
3L 1411524..1413089 387..1952 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:33:57 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1411088..1411473 1..386 100 -> Plus
3L 1411524..1413089 387..1952 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:59:18 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1411088..1411473 1..386 100 -> Plus
arm_3L 1411524..1413089 387..1952 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:21:55 Download gff for IP13869.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1411088..1411473 1..386 100 -> Plus
3L 1411524..1413089 387..1952 100   Plus

IP13869.pep Sequence

Translation from 0 to 1940

> IP13869.pep
LGRNVFLLCSIQFLLCKAKLSLHSHYPNVAKTLENKKFYVDSPSCKMPEM
DPFSADIMRFFKRRQFRECSSDKDLLISEFDSHLRQYRIKIDENSAQQHL
KKFGNATLKCEYQVIGRNKKDSFPDNHFSFSKLQPLSQSFLVPKTIDFIS
TQCHAVHGNIDLKLLQKDAFLFVQDRLNHEHKNTEHHRPDLQSKPNVIIL
GIDSTSRMNLRRSMPKVHKFLQRPGWFEMQGYNKVGENTLPNLLAILTGN
AEENALFNGRFGHSGFIDKLKFIWQLFKKNGYMTAFGEDCAKINTFNYQK
PGFKQQPVDFYLRNFIVALETILKTRREFGNVFCLGRKLGFQYVFDFARQ
FMQRFENSAPVFGIFWSNSFTHEDFLGATALDHVFLEYLTLYDELGFFNR
SIVMVLSDHGYRYGVTRQASKSGYLEERLPLMFIHVPPWFRKIYPQYVEN
LKINQNRLSSGFDLHMTLHHLLHLNATSMADFSPKLQASQCKMCQSLFFQ
LPANRNCSHAGIREKWCSCEPTETVTNQRLLRKVAQEVVHHMNRHLRDRN
LTTLCQNYALKKVLYLDSKISLSEDSVEDEQLHTYIITFETNPSSAHFEA
TVQWNSEKETLNMNVDELSRLESYEKHSKCTRDPIIKKYCICKEFK*

IP13869.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:15:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15458-PA 652 GF15458-PA 25..639 30..644 1622 47.6 Plus
Dana\GF24761-PA 604 GF24761-PA 1..602 47..644 1514 47.7 Plus
Dana\GF22679-PA 716 GF22679-PA 69..671 27..642 1180 38.7 Plus
Dana\GF18584-PA 609 GF18584-PA 6..603 36..643 1161 40 Plus
Dana\GF17993-PA 674 GF17993-PA 48..668 18..642 1149 38.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:15:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14789-PA 596 GG14789-PA 1..596 47..646 2561 79.5 Plus
Dere\GG21592-PA 646 GG21592-PA 30..638 37..644 1615 49.7 Plus
Dere\GG25320-PA 664 GG25320-PA 46..658 24..642 1182 38.8 Plus
Dere\GG25319-PA 664 GG25319-PA 46..658 24..642 1172 38.6 Plus
Dere\GG25317-PA 620 GG25317-PA 22..611 36..642 1139 39 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:15:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25084-PA 618 GH25084-PA 2..612 29..642 1152 37.1 Plus
Dgri\GH17147-PA 685 GH17147-PA 79..673 38..642 1137 38.6 Plus
Dgri\GH25085-PA 695 GH25085-PA 74..671 37..642 1109 37.4 Plus
Dgri\GH17274-PA 614 GH17274-PA 1..606 8..642 1103 35.5 Plus
Dgri\GH17275-PA 570 GH17275-PA 3..568 56..643 1081 36.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG9168-PB 648 CG9168-PB 3..648 1..646 3453 100 Plus
CG10730-PC 644 CG10730-PC 31..638 38..644 1566 48.8 Plus
CG9988-PA 668 CG9988-PA 66..662 38..643 1179 40.6 Plus
CG18088-PC 663 CG18088-PC 46..658 24..642 1139 37.8 Plus
CG18088-PB 663 CG18088-PB 46..658 24..642 1139 37.8 Plus
CG18088-PA 663 CG18088-PA 46..658 24..642 1139 37.8 Plus
CG32985-PB 644 CG32985-PB 46..635 36..642 1094 38.5 Plus
CG32984-PB 650 CG32984-PB 17..640 7..642 1090 37.9 Plus
CG15695-PA 725 CG15695-PA 154..725 36..642 961 34.2 Plus
CG7120-PG 701 CG7120-PG 104..700 36..646 937 34 Plus
CG7120-PF 701 CG7120-PF 104..700 36..646 937 34 Plus
CG7120-PE 686 CG7120-PE 91..685 38..646 934 34 Plus
CG7120-PD 686 CG7120-PD 91..685 38..646 934 34 Plus
CG9525-PB 659 CG9525-PB 44..610 25..643 711 29.7 Plus
CG9525-PA 678 CG9525-PA 44..629 25..643 693 29.1 Plus
CG16854-PC 677 CG16854-PC 73..675 38..642 678 29.7 Plus
CG16854-PB 705 CG16854-PB 101..703 38..642 678 29.7 Plus
CG16854-PD 705 CG16854-PD 101..703 38..642 678 29.7 Plus
CG14731-PA 641 CG14731-PA 17..640 5..642 527 27.4 Plus
CG3123-PA 634 CG3123-PA 46..633 34..642 511 25.5 Plus
CG31933-PA 673 CG31933-PA 148..671 142..642 508 28.5 Plus
CG6236-PA 680 CG6236-PA 202..680 196..644 489 28.4 Plus
CG6236-PB 680 CG6236-PB 202..680 196..644 489 28.4 Plus
CG11630-PA 631 CG11630-PA 40..630 36..642 468 27 Plus
CG1428-PA 617 CG1428-PA 179..616 194..642 393 28.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:15:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17448-PA 642 GI17448-PA 26..628 35..643 1445 44.8 Plus
Dmoj\GI17447-PA 627 GI17447-PA 10..621 27..642 1193 39.7 Plus
Dmoj\GI10580-PA 611 GI10580-PA 6..605 38..642 1189 41.5 Plus
Dmoj\GI17450-PA 681 GI17450-PA 66..662 35..644 1115 37.6 Plus
Dmoj\GI10599-PA 583 GI10599-PA 1..576 47..642 1103 36.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:15:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22506-PA 646 GL22506-PA 32..640 37..644 1577 48.4 Plus
Dper\GL26674-PA 611 GL26674-PA 1..589 58..644 1505 50 Plus
Dper\GL26229-PA 665 GL26229-PA 51..659 29..642 1209 39.4 Plus
Dper\GL26232-PA 1319 GL26232-PA 98..695 37..642 1036 36.4 Plus
Dper\GL24281-PA 533 GL24281-PA 17..533 101..642 965 36.1 Plus
Dper\GL26232-PA 1319 GL26232-PA 759..1312 31..642 704 30.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:15:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24485-PA 645 GA24485-PA 32..639 37..644 1717 51.7 Plus
Dpse\GA10528-PA 611 GA10528-PA 1..589 58..644 1502 49.8 Plus
Dpse\GA14785-PA 665 GA14785-PA 44..659 20..642 1203 39.3 Plus
Dpse\GA22170-PB 682 GA22170-PB 78..676 38..642 1124 38.2 Plus
Dpse\GA28087-PA 706 GA28087-PA 67..662 36..642 1108 36.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:15:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14408-PA 600 GM14408-PA 1..600 47..646 2977 90.7 Plus
Dsec\GM16966-PA 567 GM16966-PA 1..561 75..644 1380 46.7 Plus
Dsec\GM17304-PA 663 GM17304-PA 46..658 24..642 1151 37.7 Plus
Dsec\GM17283-PA 618 GM17283-PA 20..609 36..642 1134 39.4 Plus
Dsec\GM17294-PA 497 GM17294-PA 12..483 163..642 948 40.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:15:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13617-PA 600 GD13617-PA 1..600 47..646 3009 91.8 Plus
Dsim\GD21718-PA 577 GD21718-PA 5..571 79..644 1458 48.2 Plus
Dsim\GD21376-PA 669 GD21376-PA 67..662 38..642 1172 39.8 Plus
Dsim\GD23578-PA 663 GD23578-PA 46..658 24..642 1139 37.4 Plus
Dsim\GD23576-PA 617 GD23576-PA 20..609 36..642 1138 39.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:15:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22955-PA 647 GJ22955-PA 56..643 27..644 1137 36.2 Plus
Dvir\GJ22954-PA 582 GJ22954-PA 1..577 47..645 1124 36.5 Plus
Dvir\GJ22937-PA 599 GJ22937-PA 1..593 47..642 1103 38.3 Plus
Dvir\GJ14307-PA 627 GJ14307-PA 13..606 36..642 1092 37.9 Plus
Dvir\GJ14285-PA 498 GJ14285-PA 14..492 165..642 1063 42.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:15:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12100-PA 652 GK12100-PA 51..647 38..643 1113 37.5 Plus
Dwil\GK15327-PA 713 GK15327-PA 60..673 27..646 1110 36.9 Plus
Dwil\GK15328-PA 651 GK15328-PA 24..624 32..642 1034 34.4 Plus
Dwil\GK22473-PA 560 GK22473-PA 1..558 47..642 1017 34.2 Plus
Dwil\GK17756-PA 715 GK17756-PA 119..710 38..643 938 33.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21152-PA 597 GE21152-PA 1..597 47..646 2567 79.7 Plus
Dyak\GE12611-PA 653 GE12611-PA 37..645 37..644 1612 49.5 Plus
Dyak\GE18812-PA 665 GE18812-PA 51..657 29..642 1171 38.6 Plus
Dyak\GE18811-PA 666 GE18811-PA 14..658 5..642 1168 37.8 Plus
Dyak\GE18810-PA 666 GE18810-PA 46..658 24..642 1155 38 Plus

IP13869.hyp Sequence

Translation from 0 to 1940

> IP13869.hyp
LGRNVFLLCSIQFLLCKAKLSLHSHYPNVAKTLENKKFYVDSPSCKMPEM
DPFSADIMRFFKRRQFRECSSDKDLLISEFDSHLRQYRIKIDENSAQQHL
KKFGNATLKCEYQVIGRNKKDSFPDNHFSFSKLQPLSQSFLVPKTIDFIS
TQCHAVHGNIDLKLLQKDAFLFVQDRLNHEHKNTEHHRPDLQSKPNVIIL
GIDSTSRMNLRRSMPKVHKFLQRPGWFEMQGYNKVGENTLPNLLAILTGN
AEENALFNGRFGHSGFIDKLKFIWQLFKKNGYMTAFGEDCAKINTFNYQK
PGFKQQPVDFYLRNFIVALETILKTRREFGNVFCLGRKLGFQYVFDFARQ
FMQRFENSAPVFGIFWSNSFTHEDFLGATALDHVFLEYLTLYDELGFFNR
SIVMVLSDHGYRYGVTRQASKSGYLEERLPLMFIHVPPWFRKIYPQYVEN
LKINQNRLSSGFDLHMTLHHLLHLNATSMADFSPKLQASQCKMCQSLFFQ
LPANRNCSHAGIREKWCSCEPTETVTNQRLLRKVAQEVVHHMNRHLRDRN
LTTLCQNYALKKVLYLDSKISLSEDSVEDEQLHTYIITFETNPSSAHFEA
TVQWNSEKETLNMNVDELSRLESYEKHSKCTRDPIIKKYCICKEFK*

IP13869.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:01:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG9168-PA 600 CG9168-PA 1..600 47..646 3208 100 Plus
CG10730-PC 644 CG10730-PC 31..638 38..644 1566 48.8 Plus
CG9988-PA 668 CG9988-PA 66..662 38..643 1179 40.6 Plus
CG18088-PC 663 CG18088-PC 46..658 24..642 1139 37.8 Plus
CG18088-PB 663 CG18088-PB 46..658 24..642 1139 37.8 Plus