Clone IP14417 Report

Search the DGRC for IP14417

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:144
Well:17
Vector:pOT2
Associated Gene/Transcripttbrd-1-RA
Protein status:IP14417.pep: gold
Sequenced Size:1737

Clone Sequence Records

IP14417.complete Sequence

1737 bp assembled on 2012-03-08

GenBank Submission: BT133318.1

> IP14417.complete
AGCTGTGAATTTTGAGTTGTTCAAAAAGCTAATATTAGGAGTTGGGTGAC
CTTACAAACCAGCAATGAATGAACTGCAGTCGAATAGCAACCAGCCTCCG
CCGCGCAATGAGCCGTATCTGCAGCCGGTGAATGGCATCGTGCAACCGCC
GGTGATTCCGCCACCGAATCGTCCTGGGCGAAGGACAAACATCCTAGAAG
AGCTCAAGTCCGTGCTGAATTGCTTATGGCGCAATCGCTTCTCGTATCAC
TTTCGCCATCCCGTCGATTCTGTGAGCCTGGGTGTGCCCGACTACCATGC
GGTGGTCAAGCATCCGATGGACTTGAGTACAATTAGGAAGCGACTGCACA
ACAAATACTACTGGCAGGCGAGCGAGGCTCTGGAGGATTTCAAGCTGATA
TTCGATAACTGCTTGTTGTACAATTTGGAGGGCTCACCGGTTTATCAGGC
AGGGAAGCTTCTAATGGAGGCCTTTTACATGCGAATGGAGTCCATTGATT
TGAGCACGGAGGTGGAACTAAAGCCGAAGTCGGAAAAGCGCAAGAGAAAG
GCTACTGAATCATTGGATCAAGCCTCGACTTCGTTCTCAGCACCTCGAGC
ATCTAACAATTATTCTAGACAGTGGCTCTCGAGTAGTTCCTCATGGCTCT
GTCCCCCACCGATGCCTGGCGGGGTGTCGTCATTTAATCCTTCATTCCGA
AATTTCGTGGGTCCCAGCTTGATCCCATCTTTTATGCCCGATTCCTTGGT
GAATCCCATGCAATCTATGCATCCAATGTCATCAATGATGAATCCGATAT
TCAAGAATAATTGGGAGACAAATGAAGCAATGGATCCACCGCCCTCAGAG
CCAATTTCCTATCGTCCCTTGGATTCCTTGGCAGCACCCTTACCGTCCCC
TCCAATGGAACCCATGACTTTGCCTTGGCCAACCCCAGCACCAGTTGAAT
CTCCAGCTTCATCGCCTCCTCCGGCTCCCAATCCACCCATTATCATCTGC
TACAAGTCTCTCGACCGAATGATTGAAAAAAGCCACTCAGATCATCTTCT
GAAGTCGATGGTAAAGCGAAAGCGCAAGCAGGTTACATGGGCATTTAATC
AGGCTGACTACTGGCGAAGGTACTCCCAGAATCCGGACTACGACCACGAT
CGCGAAGAGAAACTCGATTGGAAGATACTACAGGAGCGCTTGGACTCCGA
TAACTTTGAGAGCTTTGATGGATTCGTGAGCTCTGTACGAAAGATGTTCC
AGAACGCATTGCGTTGCTTTCCGGAAGATGGATTGGTCAAGGTTTCGGTG
AAGAAAACCAATGAGATCTTTGAGAAAAGGCTGCCCAAGTACAGGGAGTT
AATTGCCACGGCCAAGGAAAAGGGGCGTCAACTGGTGGCCAGCAGGGAAC
AAGATTTTCGTGACTCACAAAACCTGCTCATTAAACAAGAAAACGCTAAT
AAGAATTTCAAAGGATGGGTTCCAAAGCCATTTATTATTAAAACGGAGTC
CCTGTTTGTGCAAGAACAGCGAGTGTACAAAATGGAGCCCCAGGATGTAC
AAGAATTTTCACCTGGTACGGAGCCGCTGGATGACCAAACTTATGATAGC
GATTAAAGTGTGTAGAATTCTACCACGGAAATGAAAAAAAATGAAAATGC
AAATTATTATAATTATTATTCATAAAGAATTGTTATTAGCCTAAAATATG
ATTCTAATTACGAGCTACCGAAAAAAAAAAAAAAAAA

IP14417.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:07:26
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19715013..19716705 1720..28 8375 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:07:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23891596..23893289 1721..28 8470 100 Minus
Blast to na_te.dros performed on 2019-03-17 01:07:25 has no hits.

IP14417.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:08:00 Download gff for IP14417.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19715013..19716705 28..1720 99 <- Minus
chr3R 19716763..19716789 1..27 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-08 11:51:33 Download gff for IP14417.complete
Subject Subject Range Query Range Percent Splice Strand
CG13597-RA 1..1542 65..1606 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:25:49 Download gff for IP14417.complete
Subject Subject Range Query Range Percent Splice Strand
tbrd-1-RA 1..1542 65..1606 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:46:29 Download gff for IP14417.complete
Subject Subject Range Query Range Percent Splice Strand
tbrd-1-RA 1..1542 65..1606 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-08 11:51:33 Download gff for IP14417.complete
Subject Subject Range Query Range Percent Splice Strand
CG13597-RA 7..1639 1..1633 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:25:49 Download gff for IP14417.complete
Subject Subject Range Query Range Percent Splice Strand
tbrd-1-RA 7..1726 1..1720 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:46:29 Download gff for IP14417.complete
Subject Subject Range Query Range Percent Splice Strand
tbrd-1-RA 7..1726 1..1720 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:08:00 Download gff for IP14417.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23891597..23893289 28..1720 100 <- Minus
3R 23893351..23893377 1..27 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:08:00 Download gff for IP14417.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23891597..23893289 28..1720 100 <- Minus
3R 23893351..23893377 1..27 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:08:00 Download gff for IP14417.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23891597..23893289 28..1720 100 <- Minus
3R 23893351..23893377 1..27 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:25:49 Download gff for IP14417.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19717319..19719011 28..1720 100 <- Minus
arm_3R 19719073..19719099 1..27 100   Minus

IP14417.pep Sequence

Translation from 64 to 1605

> IP14417.pep
MNELQSNSNQPPPRNEPYLQPVNGIVQPPVIPPPNRPGRRTNILEELKSV
LNCLWRNRFSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYW
QASEALEDFKLIFDNCLLYNLEGSPVYQAGKLLMEAFYMRMESIDLSTEV
ELKPKSEKRKRKATESLDQASTSFSAPRASNNYSRQWLSSSSSWLCPPPM
PGGVSSFNPSFRNFVGPSLIPSFMPDSLVNPMQSMHPMSSMMNPIFKNNW
ETNEAMDPPPSEPISYRPLDSLAAPLPSPPMEPMTLPWPTPAPVESPASS
PPPAPNPPIIICYKSLDRMIEKSHSDHLLKSMVKRKRKQVTWAFNQADYW
RRYSQNPDYDHDREEKLDWKILQERLDSDNFESFDGFVSSVRKMFQNALR
CFPEDGLVKVSVKKTNEIFEKRLPKYRELIATAKEKGRQLVASREQDFRD
SQNLLIKQENANKNFKGWVPKPFIIKTESLFVQEQRVYKMEPQDVQEFSP
GTEPLDDQTYDSD*

IP14417.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:59:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18731-PA 535 GF18731-PA 12..480 12..452 1110 54.4 Plus
Dana\GF20989-PA 907 GF20989-PA 2..157 7..162 413 48.4 Plus
Dana\GF11581-PA 638 GF11581-PA 17..136 26..144 242 37.5 Plus
Dana\GF17489-PA 1510 GF17489-PA 1386..1491 36..139 178 38.5 Plus
Dana\GF22418-PA 3297 GF22418-PA 1808..1912 45..144 168 39 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:59:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12396-PA 538 GG12396-PA 1..523 1..513 1690 69 Plus
Dere\GG17589-PA 2024 GG17589-PA 3..161 8..163 415 48.8 Plus
Dere\GG21955-PA 670 GG21955-PA 17..131 26..140 248 43.1 Plus
Dere\GG17589-PA 2024 GG17589-PA 473..581 39..144 186 34.9 Plus
Dere\GG18963-PA 3296 GG18963-PA 1702..1806 45..144 176 41 Plus
Dere\GG11833-PA 1481 GG11833-PA 1354..1451 36..130 175 39 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:59:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19674-PA 380 GH19674-PA 8..144 16..152 432 61.3 Plus
Dgri\GH17935-PA 1220 GH17935-PA 3..161 8..163 407 48.1 Plus
Dgri\GH19674-PA 380 GH19674-PA 245..367 319..441 354 53.7 Plus
Dgri\GH22415-PA 309 GH22415-PA 5..147 20..162 332 45.8 Plus
Dgri\GH22418-PA 309 GH22418-PA 5..147 20..162 331 45.8 Plus
Dgri\GH22416-PA 291 GH22416-PA 5..147 20..162 326 45.1 Plus
Dgri\GH17935-PA 1220 GH17935-PA 521..618 43..144 182 38.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:23
Subject Length Description Subject Range Query Range Score Percent Strand
tbrd-1-PA 513 CG13597-PA 1..513 1..513 2751 100 Plus
fs(1)h-PH 1105 CG2252-PH 2..263 7..268 429 37.2 Plus
fs(1)h-PF 1110 CG2252-PF 2..263 7..268 429 37.2 Plus
fs(1)h-PE 1110 CG2252-PE 2..263 7..268 429 37.2 Plus
fs(1)h-PD 1110 CG2252-PD 2..263 7..268 429 37.2 Plus
fs(1)h-PC 1110 CG2252-PC 2..263 7..268 429 37.2 Plus
fs(1)h-PA 1110 CG2252-PA 2..263 7..268 429 37.2 Plus
fs(1)h-PI 1115 CG2252-PI 2..263 7..268 429 37.2 Plus
fs(1)h-PB 2038 CG2252-PB 2..263 7..268 429 37.2 Plus
fs(1)h-PG 2046 CG2252-PG 2..263 7..268 429 37.2 Plus
tbrd-2-PA 674 CG7229-PA 17..194 26..187 255 34.3 Plus
fs(1)h-PH 1105 CG2252-PH 494..579 59..144 179 39.5 Plus
fs(1)h-PF 1110 CG2252-PF 499..584 59..144 179 39.5 Plus
fs(1)h-PE 1110 CG2252-PE 499..584 59..144 179 39.5 Plus
fs(1)h-PD 1110 CG2252-PD 499..584 59..144 179 39.5 Plus
fs(1)h-PC 1110 CG2252-PC 499..584 59..144 179 39.5 Plus
fs(1)h-PA 1110 CG2252-PA 499..584 59..144 179 39.5 Plus
fs(1)h-PI 1115 CG2252-PI 504..589 59..144 179 39.5 Plus
fs(1)h-PB 2038 CG2252-PB 499..584 59..144 179 39.5 Plus
fs(1)h-PG 2046 CG2252-PG 499..584 59..144 179 39.5 Plus
Acf-PA 1476 CG1966-PA 1349..1446 36..130 177 40 Plus
nej-PE 3266 CG15319-PE 1720..1804 60..144 175 43.5 Plus
nej-PB 3276 CG15319-PB 1720..1804 60..144 175 43.5 Plus
nej-PD 3276 CG15319-PD 1720..1804 60..144 175 43.5 Plus
nej-PC 3282 CG15319-PC 1726..1810 60..144 175 43.5 Plus
E(bx)-PB 2649 CG32346-PB 2539..2639 41..143 160 33 Plus
E(bx)-PI 2668 CG32346-PI 2558..2658 41..143 160 33 Plus
E(bx)-PJ 2669 CG32346-PJ 2559..2659 41..143 160 33 Plus
E(bx)-PE 2669 CG32346-PE 2559..2659 41..143 160 33 Plus
E(bx)-PA 2669 CG32346-PA 2559..2659 41..143 160 33 Plus
E(bx)-PH 2761 CG32346-PH 2651..2751 41..143 160 33 Plus
tbrd-3-PA 268 CG30417-PA 21..151 47..184 158 31.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:59:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15407-PA 2056 GI15407-PA 2..161 7..163 426 48.4 Plus
Dmoj\GI24531-PA 392 GI24531-PA 17..173 7..163 402 57.3 Plus
Dmoj\GI24531-PA 392 GI24531-PA 235..373 319..461 304 39.2 Plus
Dmoj\GI20845-PA 468 GI20845-PA 18..184 26..178 245 35.3 Plus
Dmoj\GI13646-PA 564 GI13646-PA 5..120 26..141 233 40.2 Plus
Dmoj\GI18920-PA 580 GI18920-PA 71..186 26..141 205 40.2 Plus
Dmoj\GI15407-PA 2056 GI15407-PA 503..611 39..144 184 34.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:59:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23288-PA 451 GL23288-PA 19..180 5..164 418 46.9 Plus
Dper\GL14612-PA 245 GL14612-PA 26..181 12..165 375 46.8 Plus
Dper\GL14811-PA 678 GL14811-PA 2..157 7..162 361 47.1 Plus
Dper\GL23288-PA 451 GL23288-PA 313..445 316..452 267 36.5 Plus
Dper\GL22756-PA 364 GL22756-PA 27..146 26..144 250 42.5 Plus
Dper\GL22756-PA 364 GL22756-PA 198..347 1..152 241 39.2 Plus
Dper\GL24025-PA 124 GL24025-PA 12..93 47..130 168 39.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:59:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27209-PA 451 GA27209-PA 19..180 5..164 422 47.5 Plus
Dpse\GA23222-PA 378 GA23222-PA 26..181 12..165 365 46.2 Plus
Dpse\GA26201-PA 1981 GA26201-PA 3..157 8..162 361 47.4 Plus
Dpse\GA28027-PA 378 GA28027-PA 26..181 12..165 325 42.9 Plus
Dpse\GA27209-PA 451 GA27209-PA 313..437 316..444 260 37.2 Plus
Dpse\GA23222-PA 378 GA23222-PA 243..367 316..441 255 40.5 Plus
Dpse\GA28027-PA 378 GA28027-PA 243..367 316..441 255 40.5 Plus
Dpse\GA27927-PA 320 GA27927-PA 154..303 1..152 238 39.2 Plus
Dpse\GA27927-PA 320 GA27927-PA 6..157 41..200 227 33.5 Plus
Dpse\GA26201-PA 1981 GA26201-PA 482..590 39..144 186 34.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:59:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23532-PA 510 GM23532-PA 1..510 1..513 2094 85.2 Plus
Dsec\GM11218-PA 1272 GM11218-PA 3..157 8..162 415 48.7 Plus
Dsec\GM21941-PA 667 GM21941-PA 17..142 26..150 236 38.1 Plus
Dsec\GM11218-PA 1272 GM11218-PA 478..586 39..144 188 34.9 Plus
Dsec\GM11349-PA 2950 GM11349-PA 1463..1567 45..144 175 41 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:59:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18344-PA 509 GD18344-PA 1..509 1..513 1953 82.9 Plus
Dsim\GD16134-PA 1038 GD16134-PA 2..157 7..162 409 47.8 Plus
Dsim\GD11438-PA 673 GD11438-PA 17..142 26..150 221 36.5 Plus
Dsim\GD16134-PA 1038 GD16134-PA 454..560 41..144 186 35.5 Plus
Dsim\GD16050-PA 2427 GD16050-PA 897..985 45..128 167 44.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:59:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22598-PA 354 GJ22598-PA 14..169 13..169 579 66.9 Plus
Dvir\GJ16365-PA 429 GJ16365-PA 2..173 7..176 419 46.2 Plus
Dvir\GJ22598-PA 354 GJ22598-PA 194..344 292..436 333 44.4 Plus
Dvir\GJ20583-PA 684 GJ20583-PA 19..173 26..169 245 36.8 Plus
Dvir\GJ13979-PA 500 GJ13979-PA 23..138 26..141 232 39.3 Plus
Dvir\GJ19775-PA 566 GJ19775-PA 17..202 26..195 229 32.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:59:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19172-PA 415 GK19172-PA 14..169 12..167 584 69.2 Plus
Dwil\GK19172-PA 415 GK19172-PA 171..348 289..442 507 55.6 Plus
Dwil\GK15212-PA 2114 GK15212-PA 50..198 14..162 389 47.3 Plus
Dwil\GK20671-PA 623 GK20671-PA 18..146 26..153 262 38.8 Plus
Dwil\GK15212-PA 2114 GK15212-PA 522..630 39..144 185 34.9 Plus
Dwil\GK25575-PA 3392 GK25575-PA 1784..1885 40..144 172 40 Plus
Dwil\GK12157-PA 1497 GK12157-PA 1387..1471 47..133 169 40.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:59:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23913-PA 535 GE23913-PA 1..520 1..513 1738 69.2 Plus
Dyak\GE17489-PA 2036 GE17489-PA 3..192 8..194 424 44 Plus
Dyak\GE12029-PA 677 GE12029-PA 18..132 26..140 241 42.2 Plus
Dyak\GE17489-PA 2036 GE17489-PA 475..583 39..144 187 34.9 Plus
Dyak\GE10967-PA 1475 GE10967-PA 1348..1445 36..130 175 39 Plus
Dyak\GE15438-PA 3304 GE15438-PA 1714..1818 45..144 175 41 Plus

IP14417.hyp Sequence

Translation from 64 to 1605

> IP14417.hyp
MNELQSNSNQPPPRNEPYLQPVNGIVQPPVIPPPNRPGRRTNILEELKSV
LNCLWRNRFSYHFRHPVDSVSLGVPDYHAVVKHPMDLSTIRKRLHNKYYW
QASEALEDFKLIFDNCLLYNLEGSPVYQAGKLLMEAFYMRMESIDLSTEV
ELKPKSEKRKRKATESLDQASTSFSAPRASNNYSRQWLSSSSSWLCPPPM
PGGVSSFNPSFRNFVGPSLIPSFMPDSLVNPMQSMHPMSSMMNPIFKNNW
ETNEAMDPPPSEPISYRPLDSLAAPLPSPPMEPMTLPWPTPAPVESPASS
PPPAPNPPIIICYKSLDRMIEKSHSDHLLKSMVKRKRKQVTWAFNQADYW
RRYSQNPDYDHDREEKLDWKILQERLDSDNFESFDGFVSSVRKMFQNALR
CFPEDGLVKVSVKKTNEIFEKRLPKYRELIATAKEKGRQLVASREQDFRD
SQNLLIKQENANKNFKGWVPKPFIIKTESLFVQEQRVYKMEPQDVQEFSP
GTEPLDDQTYDSD*

IP14417.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:59:02
Subject Length Description Subject Range Query Range Score Percent Strand
tbrd-1-PA 513 CG13597-PA 1..513 1..513 2751 100 Plus
fs(1)h-PH 1105 CG2252-PH 2..263 7..268 429 37.2 Plus
fs(1)h-PF 1110 CG2252-PF 2..263 7..268 429 37.2 Plus
fs(1)h-PE 1110 CG2252-PE 2..263 7..268 429 37.2 Plus
fs(1)h-PD 1110 CG2252-PD 2..263 7..268 429 37.2 Plus
fs(1)h-PH 1105 CG2252-PH 494..579 59..144 179 39.5 Plus
fs(1)h-PF 1110 CG2252-PF 499..584 59..144 179 39.5 Plus
fs(1)h-PE 1110 CG2252-PE 499..584 59..144 179 39.5 Plus