Clone IP14615 Report

Search the DGRC for IP14615

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:146
Well:15
Vector:pOT2
Associated Gene/Transcriptsage-RA
Protein status:IP14615.pep: gold
Sequenced Size:1464

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12952 2007-03-28 Manual selection by Ken Wan
sage 2008-04-29 Release 5.5 accounting
sage 2008-08-15 Release 5.9 accounting
sage 2008-12-18 5.12 accounting

Clone Sequence Records

IP14615.complete Sequence

1464 bp (1464 high quality bases) assembled on 2006-05-27

GenBank Submission: BT025847

> IP14615.complete
CTCCAGCCTGCCACACGCGCCTCGATCACCATTCGCAGCCGTCGGAGTCG
GATCGATCGGACAATAGCGAGGAAATTAAGCCGCTTTGTTTGCACAGCGA
TTGGATGGGACAAAAGGACCCTCGACGACAAGTTGGTCCCCTATAGATCA
CCTGTTGACACACGTACAAAGCGGTGGCCTCTTAAACTAGACGAGATGTG
GCCCTCATCAACCCCGGATGAGTAGTCACGTCTCGAATCGATGGATCGAT
GGTGAGCCATTCATCACGATCGCCAGAGTCGTCTCTAATGCAACTAAAAG
TAAGCAAAACAAAAAGGTACAAGCTAAAAAAAAAAAAACCAACCGAGTCC
AGGTAAACCTGCTGCAGTCCGGCCAGAACTCTTGATCGGTCATTCGAAAA
GCGGCTTAAGCGATGACGGATCAACTGCTGAGCTCCACGGCCGGCGTACC
GGGTGATCCACCGCCAGTTTTGGTGCCCGTATCAGCCACCACCGGTGGAC
CCTATTTGAGCGGTGGATCCGAGGGCGAGGCGGAATCATCGGAACAGCCC
GTTCTTCTAGAGCTCGGTGCCCCTCAATCGTCCAGTTGTCCGGCAGTTAG
TCTCAACTACACCCTAACCGCGGATGGAGCAGGCTTGCTGGCATATGCGC
CAACTCATCCGCATAGCTACTCACCCAGCGTGATGGGTGGCTACGAGAAG
GAAGCGCACAATATGGGTCTGTTGCCACCCACATATAGCGTTATACCTCA
GCCGGTGTCGATGTGGCATGCTGGCCAGGTGGCCACCGGTTCGCCAGTGG
GCTTGGAATGCAACAAACCCAGTGAGCTGGTACCTCCGCCCATGTATATG
AGCTATAGCGGCGGTAGTATAGCCAATAGCACTGAGGTGGACATCGCCAA
AGAGCACAATCCCGCCTGGCGGGAGAAGGCGCTGCAAATGGAGAAGGACT
ATAGACGCACCGCCTGCGATCGGGAAAGAACCAGGATGCGGGACATGAAC
CGAGCCTTTGACTTACTGCGCTCCAAGCTACCCATATCCAAGCCAAATGG
GAAAAAGTACTCCAAAATCGAGAGTTTGAGGATTGCCATCAACTACATTA
ATCACCTGCAGGCCATGCTGCGGGAGAGCTCCGTGGGTCAAAATGGCAAT
GGATGCTGTGCCTGGAGCGGCGGAAGTAGTTCACCTTATGATAATGGCAA
CGATCATTGGGGAGCGTAACTTGAATTAACGAATATCAAAGGGAATTCAT
TTAAATATTCAATTTAAAACTTGTGTTATATTATATCCGCAATTTGCCAA
AGTCATTCCATGAACCTATAAAAGTTAAGGTCCATACTTTACGATTTTGA
GAAGAAAAAAATTGAAATAGCTTTCATTTTATATTAGTTTATCATGTTAA
CCTTTTTATAAGTGCAATAATTAAATAAATTATCAAGAATAAAAAAAAAA
AAAAAAAAAAAAAA

IP14615.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:16:48
Subject Length Description Subject Range Query Range Score Percent Strand
sage-RA 1021 sage-RA 1..1021 413..1433 5105 100 Plus
sage-RB 914 sage-RB 1..914 520..1433 4570 100 Plus
Aats-trp-RA 2709 Aats-trp-RA 2372..2709 1..338 1690 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5088851..5089931 1081..1 5375 99.8 Minus
chr3R 27901430 chr3R 5088431..5088792 1440..1079 1810 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:22:33 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:53:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9263074..9264154 1081..1 5405 100 Minus
3R 32079331 3R 9262653..9263015 1441..1079 1815 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:10:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9003905..9004985 1081..1 5405 100 Minus
3R 31820162 3R 9003484..9003846 1441..1079 1815 100 Minus
Blast to na_te.dros performed on 2019-03-16 13:53:42 has no hits.

IP14615.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:54:51 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5088431..5088790 1081..1440 100 <- Minus
chr3R 5088852..5089931 1..1080 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:57:16 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
sage-RA 1..807 413..1219 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:28:57 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
sage-RA 1..807 413..1219 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:23:18 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
sage-RA 1..807 413..1219 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:53:12 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
sage-RA 1..807 413..1219 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:25:44 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
sage-RA 1..807 413..1219 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:00:06 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
sage-RA 1..1021 413..1433 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:28:56 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
sage-RA 1..1021 413..1433 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:23:18 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
sage-RA 1..1105 336..1440 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:53:13 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
sage-RA 1..1021 413..1433 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:25:44 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
sage-RC 1..1428 13..1440 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:54:51 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9262654..9263013 1081..1440 100 <- Minus
3R 9263075..9264154 1..1080 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:54:51 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9262654..9263013 1081..1440 100 <- Minus
3R 9263075..9264154 1..1080 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:54:51 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9262654..9263013 1081..1440 100 <- Minus
3R 9263075..9264154 1..1080 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:23:18 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5088376..5088735 1081..1440 100 <- Minus
arm_3R 5088797..5089876 1..1080 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:55:04 Download gff for IP14615.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9003485..9003844 1081..1440 100 <- Minus
3R 9003906..9004985 1..1080 100   Minus

IP14615.hyp Sequence

Translation from 412 to 1218

> IP14615.hyp
MTDQLLSSTAGVPGDPPPVLVPVSATTGGPYLSGGSEGEAESSEQPVLLE
LGAPQSSSCPAVSLNYTLTADGAGLLAYAPTHPHSYSPSVMGGYEKEAHN
MGLLPPTYSVIPQPVSMWHAGQVATGSPVGLECNKPSELVPPPMYMSYSG
GSIANSTEVDIAKEHNPAWREKALQMEKDYRRTACDRERTRMRDMNRAFD
LLRSKLPISKPNGKKYSKIESLRIAINYINHLQAMLRESSVGQNGNGCCA
WSGGSSSPYDNGNDHWGA*

IP14615.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
sage-PC 268 CG12952-PC 1..268 1..268 1431 100 Plus
sage-PA 268 CG12952-PA 1..268 1..268 1431 100 Plus

IP14615.pep Sequence

Translation from 412 to 1218

> IP14615.pep
MTDQLLSSTAGVPGDPPPVLVPVSATTGGPYLSGGSEGEAESSEQPVLLE
LGAPQSSSCPAVSLNYTLTADGAGLLAYAPTHPHSYSPSVMGGYEKEAHN
MGLLPPTYSVIPQPVSMWHAGQVATGSPVGLECNKPSELVPPPMYMSYSG
GSIANSTEVDIAKEHNPAWREKALQMEKDYRRTACDRERTRMRDMNRAFD
LLRSKLPISKPNGKKYSKIESLRIAINYINHLQAMLRESSVGQNGNGCCA
WSGGSSSPYDNGNDHWGA*

IP14615.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:48:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18422-PA 269 GF18422-PA 1..269 1..268 1110 82.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:48:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17387-PA 269 GG17387-PA 1..269 1..268 1302 94.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:48:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13982-PA 298 GH13982-PA 1..297 1..267 694 53 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:56
Subject Length Description Subject Range Query Range Score Percent Strand
sage-PC 268 CG12952-PC 1..268 1..268 1431 100 Plus
sage-PA 268 CG12952-PA 1..268 1..268 1431 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:48:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22327-PA 269 GI22327-PA 1..268 1..267 724 61.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:48:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13547-PA 274 GL13547-PA 1..274 1..268 916 69.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:48:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11935-PA 274 GA11935-PA 1..274 1..268 916 69.5 Plus
Dpse\GA11935-PB 182 GA11935-PB 1..182 91..268 731 76.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:48:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26275-PA 266 GM26275-PA 1..266 1..268 1348 95.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:48:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20810-PA 268 GD20810-PA 1..268 1..268 1393 97.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:48:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10515-PA 308 GJ10515-PA 1..306 1..266 715 53.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:48:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12985-PA 316 GK12985-PA 1..240 1..241 718 63.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:48:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24791-PA 269 GE24791-PA 1..269 1..268 1354 95.2 Plus