Clone IP15201 Report

Search the DGRC for IP15201

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:152
Well:1
Vector:pOT2
Associated Gene/TranscriptCG15523-RB
Protein status:IP15201.pep: gold
Sequenced Size:2333

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15523 2008-04-29 Release 5.5 accounting
CG15523 2008-08-15 Release 5.9 accounting
CG15523 2008-12-18 5.12 accounting

Clone Sequence Records

IP15201.complete Sequence

2333 bp (2333 high quality bases) assembled on 2006-03-22

GenBank Submission: BT025077

> IP15201.complete
AAATTCTATGGCTATGTTTGTTTTGTTAAACATATTCGGCCCAGAATTGT
AGCAAAATTCACAGCATGTAAATTCAAGTTAACCGCCGGCAACGCATTAA
ATGAAGAGTGTCATATAAGTGAGCAGTCAACAGCGCTGGGATCGAGGCCT
GAGCCTCCGGCGTCGCCACACCATGTTCAAACTGGAGTCCTACATCACTC
CGATTCTGCTGAGCTACGTGGCCAAGTACGTGAAGAACTTCCGCGACGAG
GATGCCCAAGTGTCGCTGTGGGAAGGCGAGGTCACCTTCCAGAATCTGGA
CCTGCGCCTGGAGGTGCTCGAGGAAGAGCTGAACCTCCCAGTAGAACTAG
TTTCCGGCCACATTCATGAACTCAGCATCCTGGTGCCGTGGACCAAGCTT
ATGTCCGAGCCCGTGAAGATCGTCATCAATACCATAGAATTCGTGGCCAA
GTTGCCGGATAGTGAGAGCAAGCAGCGCAGGGCCTCCTTCCAGCGGGAGC
AGCGAAGGAAATCGAAGCGGGAGTCCGTGGAGCAGCCGGATCAGACGAAG
AGTCCTGGACCGGCAAGCTCTTCCAGCGTGGTCAACAAAATCATCAACAA
CATCAACCTGCAGTGCCACAACATCATCCTGAAGTATGTGGAGGACGACA
TCGTGGTCTCTATGAATGTGCAGACCCTTAACTTTAGCTCCGCCGGCGAG
GACTGGAAGCCCACTATGGTGGACATACACCCGGTGTCCGTCGTCATGCG
CAAGTTGCTCCAGGTCTCAGATTTGACCATCTGCTTGGACAAGCGCAACA
CAGCTGGTAGGATAGAGGTGTGCCAGGAGCCGGTTCTCTACCGATGTACT
CTGGAGTGCCGGGTTCTCCGCAAGTACAACGCCAACACGGTGTCCACAAC
AAGCACAACACGCATTGGAGTTTTCACGAAGTCGCTGGATATCAACGTGT
CATCTCTGCAGTTCCCCATGGTGATGAGGCTGGTCAAAATGCTGCTCGAG
CTTAAGCCAGCCGAGTTTGAGGATGACCCCCAGAATCCAGAAGATCAGGA
GGCGGTAGCTGAGGGCAGCGAGTCGCAACAGGGGACCGAATCCGCAGGAC
GAAGCGTCTTTTGGTGGGCCTGGAGCCTACTGCCCAGTTTCGATACTGAG
GCGCCTTCCTCGTCCTGCGACACTCCCACTGGTCACGCCTTCGATCTGGG
AGTCTACGCCGAGGAGCTGAACTTCCAGCTTAAAAACTCGGAGTACTTTA
CCGACCAGAGCATGGGTGGCATCAAGCGAATACGATACACCCCAATATTG
CGAATTAGTTTGGGCGGACTTTATTACGAGCGGACAATTCTAAAGGAGTG
CGACTGGGCCAACGTCAAGGCGGGCCTTTCTAGCATGTGCATGGAGCCAT
TAGGTGCTTACCGTAGCGACGATCTCGTGGATCGCAACTTGGTCAATACC
CAGGAATTTCAGCAAGAGCGATCCTTTATTGACAAGAGTCTGTTTGACGA
GAACTACATGTTCGCCGAACGGTCCTGGTGCAGCTACAACTACGCGGATT
ACGTGGCCAGGAACACGGATGAATACATGCTGTTTCGCAGTCCTGTTTTG
GCCTTCGACGTCATCGAGCACCGGGTGCCTAAGCCCAGCAGCCATCCCGT
GGCGGAGAGCCAGCTCAGAGATCTGGGAGTTCGCATCCAGTATCGTCTAT
TGTCCGCCGGAATCACGTTCCACTTTTCGCAGTCGTTCGTCCAGGTTAAA
AAGAATCGATGAAGGATGAGGATCGCGGTGTCCCCGAGCCGGAAAACAAG
AACTCTGAAATGACTATACCTGATCTGGAGTATCTGATGGGATTGGTGCC
CACTTGTAACTACAAAATTGAGTTGCGTAACATTGTGGTTCAGTTGTATC
CCCGCCAGCAGCAAGATGAGTCATCCGCGATCAATCAACACCAACTGACG
ACCACAGTCAGACAATCTTTGCTACCATATTTGCAGCTTAAGATCTCCCT
AGTCGAGGGCACAATGTGTGGACCAGTGAATCCTGTTCGCCTGGTCCAAC
TGATTACTCATCTAGAAGAGAAGCCTCGGGACGTGGTTAATGCCTGCTAC
AACTGTTTTCACTTCAATGTGAAAAACTTGGCGCTTATGATTATGAATAC
AACTCCGGATAATGGACGTGCCAAGCTTTTGAATATTCCACGCGTTCAAG
TGAACTGGAACCGCCTTTTGGCGCCTCATCTTTGGCGTCAAAACGAGGCG
CCTTTAGAGACTTCGGAAATAAAATCAGAGATCATAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP15201.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:34:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG15523-RB 2309 CG15523-RB 25..2309 1..2285 11425 100 Plus
CG15523-RA 11553 CG15523-RA 60..1812 1..1753 8765 100 Plus
CG15523-RA 11553 CG15523-RA 1860..2395 1752..2287 2680 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:31:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 25758432..25759887 1..1456 7130 99.3 Plus
chr3R 27901430 chr3R 25760289..25760822 1752..2285 2640 99.6 Plus
chr3R 27901430 chr3R 25759945..25760241 1457..1753 1470 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:23:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:31:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29936002..29937457 1..1456 7280 100 Plus
3R 32079331 3R 29937859..29938394 1752..2287 2680 100 Plus
3R 32079331 3R 29937515..29937811 1457..1753 1485 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:25:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 29676833..29678288 1..1456 7280 100 Plus
3R 31820162 3R 29678690..29679225 1752..2287 2680 100 Plus
3R 31820162 3R 29678346..29678642 1457..1753 1485 100 Plus
Blast to na_te.dros performed on 2019-03-16 07:31:49 has no hits.

IP15201.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:32:54 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 25758432..25759887 1..1456 99 -> Plus
chr3R 25759945..25760241 1457..1753 99 -> Plus
chr3R 25760291..25760822 1754..2285 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:58:18 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
CG15523-RA 1..1581 173..1753 100 -> Plus
CG15523-RA 1631..2162 1754..2285 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:59:17 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
CG15523-RB 1..1590 173..1762 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:32:20 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
CG15523-RB 1..1590 173..1762 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:39:53 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
CG15523-RA 1..1581 173..1753 100 -> Plus
CG15523-RA 1631..2162 1754..2285 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:35:10 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
CG15523-RB 1..1590 173..1762 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:40:41 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
CG15523-RA 1..1581 173..1753 100 -> Plus
CG15523-RA 1631..2162 1754..2285 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:59:17 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
CG15523-RB 25..2309 1..2285 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:32:20 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
CG15523-RB 25..2309 1..2285 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:39:54 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
CG15523-RA 1..1581 173..1753 100 -> Plus
CG15523-RA 1631..2162 1754..2285 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:35:10 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
CG15523-RB 25..2309 1..2285 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:32:54 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29936002..29937457 1..1456 100 -> Plus
3R 29937515..29937811 1457..1753 100 -> Plus
3R 29937861..29938392 1754..2285 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:32:54 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29936002..29937457 1..1456 100 -> Plus
3R 29937515..29937811 1457..1753 100 -> Plus
3R 29937861..29938392 1754..2285 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:32:54 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29936002..29937457 1..1456 100 -> Plus
3R 29937515..29937811 1457..1753 100 -> Plus
3R 29937861..29938392 1754..2285 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:32:20 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25761724..25763179 1..1456 100 -> Plus
arm_3R 25763237..25763533 1457..1753 100 -> Plus
arm_3R 25763583..25764114 1754..2285 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:18:45 Download gff for IP15201.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29676833..29678288 1..1456 100 -> Plus
3R 29678346..29678642 1457..1753 100 -> Plus
3R 29678692..29679223 1754..2285 100   Plus

IP15201.pep Sequence

Translation from 172 to 1761

> IP15201.pep
MFKLESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLE
EELNLPVELVSGHIHELSILVPWTKLMSEPVKIVINTIEFVAKLPDSESK
QRRASFQREQRRKSKRESVEQPDQTKSPGPASSSSVVNKIINNINLQCHN
IILKYVEDDIVVSMNVQTLNFSSAGEDWKPTMVDIHPVSVVMRKLLQVSD
LTICLDKRNTAGRIEVCQEPVLYRCTLECRVLRKYNANTVSTTSTTRIGV
FTKSLDINVSSLQFPMVMRLVKMLLELKPAEFEDDPQNPEDQEAVAEGSE
SQQGTESAGRSVFWWAWSLLPSFDTEAPSSSCDTPTGHAFDLGVYAEELN
FQLKNSEYFTDQSMGGIKRIRYTPILRISLGGLYYERTILKECDWANVKA
GLSSMCMEPLGAYRSDDLVDRNLVNTQEFQQERSFIDKSLFDENYMFAER
SWCSYNYADYVARNTDEYMLFRSPVLAFDVIEHRVPKPSSHPVAESQLRD
LGVRIQYRLLSAGITFHFSQSFVQVKKNR*

IP15201.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:49:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18810-PA 3598 GF18810-PA 1..309 1..312 1281 83.7 Plus
Dana\GF18810-PA 3598 GF18810-PA 307..406 427..526 447 79 Plus
Dana\GF13185-PA 3328 GF13185-PA 3..189 4..179 172 22.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:49:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11713-PA 3615 GG11713-PA 1..527 1..527 2762 97.2 Plus
Dere\GG23288-PA 3255 GG23288-PA 3..188 4..178 170 23.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:49:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18508-PA 3746 GH18508-PA 1..526 1..526 2066 73.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:21:04
Subject Length Description Subject Range Query Range Score Percent Strand
Vps13B-PB 529 CG15523-PB 1..529 1..529 2733 100 Plus
Vps13B-PA 3731 CG15523-PA 1..527 1..527 2722 100 Plus
Vps13-PB 3321 CG2093-PB 4..160 5..155 177 25.6 Plus
Vps13-PA 3321 CG2093-PA 4..160 5..155 177 25.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:49:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10796-PA 3743 GI10796-PA 1..526 1..526 1958 71.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:49:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14011-PA 3728 GL14011-PA 1..525 1..526 2202 80.8 Plus
Dper\GL20017-PA 3339 GL20017-PA 3..160 4..155 170 24.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:49:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13781-PA 3728 GA13781-PA 1..525 1..526 2202 80.8 Plus
Dpse\GA15235-PA 3339 GA15235-PA 3..160 4..155 170 24.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:49:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12843-PA 3416 GM12843-PA 1..527 1..527 2790 98.7 Plus
Dsec\GM20964-PA 527 GM20964-PA 3..160 4..155 173 25.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:49:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21486-PA 2785 GD21486-PA 1..527 1..527 2801 98.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:49:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14394-PA 3756 GJ14394-PA 15..519 2..508 1920 71.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:49:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13201-PA 3785 GK13201-PA 1..530 1..526 2100 72.3 Plus
Dwil\GK10679-PA 3340 GK10679-PA 3..160 4..155 177 26.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:49:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23903-PA 3708 GE23903-PA 1..527 1..527 2759 96.8 Plus
Dyak\GE19134-PA 3214 GE19134-PA 3..160 4..155 169 24.8 Plus

IP15201.hyp Sequence

Translation from 172 to 1761

> IP15201.hyp
MFKLESYITPILLSYVAKYVKNFRDEDAQVSLWEGEVTFQNLDLRLEVLE
EELNLPVELVSGHIHELSILVPWTKLMSEPVKIVINTIEFVAKLPDSESK
QRRASFQREQRRKSKRESVEQPDQTKSPGPASSSSVVNKIINNINLQCHN
IILKYVEDDIVVSMNVQTLNFSSAGEDWKPTMVDIHPVSVVMRKLLQVSD
LTICLDKRNTAGRIEVCQEPVLYRCTLECRVLRKYNANTVSTTSTTRIGV
FTKSLDINVSSLQFPMVMRLVKMLLELKPAEFEDDPQNPEDQEAVAEGSE
SQQGTESAGRSVFWWAWSLLPSFDTEAPSSSCDTPTGHAFDLGVYAEELN
FQLKNSEYFTDQSMGGIKRIRYTPILRISLGGLYYERTILKECDWANVKA
GLSSMCMEPLGAYRSDDLVDRNLVNTQEFQQERSFIDKSLFDENYMFAER
SWCSYNYADYVARNTDEYMLFRSPVLAFDVIEHRVPKPSSHPVAESQLRD
LGVRIQYRLLSAGITFHFSQSFVQVKKNR*

IP15201.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:13:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG15523-PB 529 CG15523-PB 1..529 1..529 2733 100 Plus
CG15523-PA 3731 CG15523-PA 1..527 1..527 2722 100 Plus
Vps13-PB 3321 CG2093-PB 4..160 5..155 177 25.6 Plus
Vps13-PA 3321 CG2093-PA 4..160 5..155 177 25.6 Plus