Clone IP15246 Report

Search the DGRC for IP15246

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:152
Well:46
Vector:pOT2
Associated Gene/TranscriptUcp4B-RA
Protein status:IP15246.pep: gold
Sequenced Size:1106

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Ucp4B 2008-04-29 Release 5.5 accounting
Ucp4B 2008-08-15 Release 5.9 accounting
Ucp4B 2008-12-18 5.12 accounting

Clone Sequence Records

IP15246.complete Sequence

1106 bp (1106 high quality bases) assembled on 2005-11-21

GenBank Submission: BT024270

> IP15246.complete
ACACAACAAACACTCAAGATATTTCTCTTAAATGGGAAAAGGCGTTAACA
CAGTCTTTAGGCCAGCAGAATGGGACAATTCGGAGGAGAAGGAAAGACCC
AAGTTGGAGTACTTGGTGACCAACAAGAAGACTCCGCCGGTTGAACTCTA
CCTCACGGCATTCGCCTCCGCCTGCAGTGCCGAGATTGTGGGCTATCCCT
TCGATATGTGCAAGACCCGAATGCAGATCCAGGGCGAGATCGCGAGCAGG
GTGGGTCAGAAGGCCAAGTACCGAGGTCTGCTGGCCACTGCCATGGGCAT
CGTCAGGGAGGAGGGTCTGCTGAAGCTCTACGGTGGCATATCCGCCATGC
TGTTCCGCCACTCGCTCTTCAGTGGCATCAAAATGCTGACCTACGACTAT
ATGCGTGAGAAGATGATCGTGCCCGACGAGGACGGCAGGCCGCAGCTATC
CTTCCTGGGATCCTGCATCAGTGGCGTCTTAGCCGGCGCAACTGCCAGCG
TACTAACGAATCCCACCGAGCTGATTAAGATCCAAATGCAAATGGAGGGA
CAGCGGCGTCTAAGGGGCGAGCCTCCACGCATTCACAATGTGCTCCAGGC
CCTGACTTCCATTTACAGAACGGGTGGTGTGGTGGGTCTCTGGAAGGGAA
CTGTTCCAAACACATGGCGCTCGGCACTCGTGACCATAGGGGACGTCAGC
TGCTATGACTTTTGCAAACGCTTTCTGATTGCCGAGTTCGATCTGGTGGA
TAACCGAGAAGTGCAGTTCGTAGCCGCCATGACCGCCGGCGTAGCGGATG
CCATTCTGAGCTTGCCAGCGGACGTGGTCAAGTCCCGGATCATGAATCAG
CCAACCGATGAGCAGGGACGCGGCATTCATTACAAGGGCTCCCTGGATTG
CTTAAGTAGGTTGGTTAGAGAGGAGGGCTTTTTGGCCATGTACAAGGGAT
TCATTCCATATTGGATGCGTGTCGGACCTGCCTCCGTGGTGTTCTGGATG
ACCTTCGAGCAGATTAGACGGTTTCGTGGCAGCGAAGGTTACTAGCTAAA
GATGCAGTTTAAAATATAACAGAGTAAAATATCATTAAAAAAAAAAAAAA
AAAAAA

IP15246.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:25:56
Subject Length Description Subject Range Query Range Score Percent Strand
Ucp4B.b 1542 Ucp4B.b 29..1116 1..1088 5440 100 Plus
Ucp4B-RA 1217 Ucp4B-RA 29..1116 1..1088 5440 100 Plus
Ucp4B.a 1167 Ucp4B.a 6..694 1..689 3445 100 Plus
Ucp4B.a 1167 Ucp4B.a 693..1083 698..1088 1955 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:34:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5968922..5969611 1..690 3450 100 Plus
chr2L 23010047 chr2L 5969678..5970076 688..1086 1995 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:24:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:34:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5969871..5970560 1..690 3450 100 Plus
2L 23513712 2L 5970627..5971027 688..1088 2005 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:17:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5969871..5970560 1..690 3450 100 Plus
2L 23513712 2L 5970627..5971027 688..1088 2005 100 Plus
Blast to na_te.dros performed on 2019-03-15 21:34:31 has no hits.

IP15246.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:35:38 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5968922..5969610 1..689 100 -> Plus
chr2L 5969680..5970076 690..1086 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:58:44 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4B-RA 1..1014 32..1045 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:46:08 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4B-RA 1..1014 32..1045 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:52:16 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4B-RA 1..1014 32..1045 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:27:41 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4B-RA 1..1014 32..1045 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:57:10 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4B-RA 1..1014 32..1045 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:19:26 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4B-RA 1..1033 13..1045 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:46:08 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4B-RA 1..1086 1..1086 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:52:16 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4B-RA 13..1098 1..1086 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:27:41 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4B-RA 1..1033 13..1045 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:10 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
Ucp4B-RA 13..1098 1..1086 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:35:38 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5970629..5971025 690..1086 100   Plus
2L 5969871..5970559 1..689 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:35:38 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5970629..5971025 690..1086 100   Plus
2L 5969871..5970559 1..689 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:35:38 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5970629..5971025 690..1086 100   Plus
2L 5969871..5970559 1..689 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:52:16 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5969871..5970559 1..689 100 -> Plus
arm_2L 5970629..5971025 690..1086 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:06:38 Download gff for IP15246.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5969871..5970559 1..689 100 -> Plus
2L 5970629..5971025 690..1086 100   Plus

IP15246.pep Sequence

Translation from 31 to 1044

> IP15246.pep
MGKGVNTVFRPAEWDNSEEKERPKLEYLVTNKKTPPVELYLTAFASACSA
EIVGYPFDMCKTRMQIQGEIASRVGQKAKYRGLLATAMGIVREEGLLKLY
GGISAMLFRHSLFSGIKMLTYDYMREKMIVPDEDGRPQLSFLGSCISGVL
AGATASVLTNPTELIKIQMQMEGQRRLRGEPPRIHNVLQALTSIYRTGGV
VGLWKGTVPNTWRSALVTIGDVSCYDFCKRFLIAEFDLVDNREVQFVAAM
TAGVADAILSLPADVVKSRIMNQPTDEQGRGIHYKGSLDCLSRLVREEGF
LAMYKGFIPYWMRVGPASVVFWMTFEQIRRFRGSEGY*

IP15246.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:40:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15592-PA 357 GF15592-PA 30..357 12..337 1234 69.5 Plus
Dana\GF21108-PA 359 GF21108-PA 56..359 40..337 793 47.2 Plus
Dana\GF15828-PA 335 GF15828-PA 12..331 16..335 776 46.6 Plus
Dana\GF15593-PA 335 GF15593-PA 38..335 38..337 616 39 Plus
Dana\GF25285-PA 303 GF25285-PA 16..303 46..331 444 33.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:40:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25109-PA 337 GG25109-PA 1..337 1..337 1747 96.1 Plus
Dere\GG19134-PA 340 GG19134-PA 44..340 40..337 802 48 Plus
Dere\GG25108-PA 335 GG25108-PA 37..335 37..337 660 40.5 Plus
Dere\GG15525-PA 303 GG15525-PA 16..303 46..331 437 33.1 Plus
Dere\GG20428-PA 307 GG20428-PA 12..297 46..332 431 32.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:41:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23855-PA 333 GH23855-PA 12..333 17..337 1150 64.9 Plus
Dgri\GH11016-PA 333 GH11016-PA 12..333 17..337 1148 64.6 Plus
Dgri\GH24385-PA 362 GH24385-PA 74..362 51..337 779 49 Plus
Dgri\GH11017-PA 333 GH11017-PA 35..333 37..337 726 44.9 Plus
Dgri\GH15075-PA 305 GH15075-PA 16..305 46..331 430 33.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:18
Subject Length Description Subject Range Query Range Score Percent Strand
Ucp4B-PA 337 CG18340-PA 1..337 1..337 1752 100 Plus
Ucp4B-PB 222 CG18340-PB 1..221 1..221 1137 99.5 Plus
Ucp4B-PC 228 CG18340-PC 1..219 1..219 1129 100 Plus
Ucp4A-PB 340 CG6492-PB 44..340 40..337 772 48 Plus
Ucp4A-PA 340 CG6492-PA 44..340 40..337 772 48 Plus
Ucp4C-PA 335 CG9064-PA 38..335 38..337 651 41.3 Plus
Bmcp-PB 303 CG7314-PB 16..303 46..331 457 34.7 Plus
Bmcp-PA 303 CG7314-PA 16..303 46..331 457 34.7 Plus
CG18324-PB 307 CG18324-PB 12..297 46..332 383 30.6 Plus
CG18327-PB 304 CG18327-PB 12..297 46..332 373 29.2 Plus
CG18327-PA 304 CG18327-PA 12..297 46..332 373 29.2 Plus
CG8323-PA 303 CG8323-PA 22..293 56..328 352 28.7 Plus
CG1907-PA 317 CG1907-PA 21..302 40..330 349 31.2 Plus
CG18418-PA 311 CG18418-PA 3..295 25..330 344 29.7 Plus
CG7514-PA 301 CG7514-PA 1..286 25..330 338 29.4 Plus
CG18324-PA 199 CG18324-PA 4..189 148..332 273 30.6 Plus
Dic4-PC 302 CG18363-PC 28..288 44..329 263 29 Plus
Dic4-PA 302 CG18363-PA 28..288 44..329 263 29 Plus
Dic1-PC 280 CG8790-PC 16..273 46..329 259 27.1 Plus
Dic1-PA 280 CG8790-PA 16..273 46..329 259 27.1 Plus
Dic1-PB 280 CG8790-PB 16..273 46..329 259 27.1 Plus
Dic3-PA 287 CG11196-PA 14..277 44..329 254 27.5 Plus
aralar1-PB 679 CG2139-PB 332..602 41..330 246 31 Plus
aralar1-PD 682 CG2139-PD 335..605 41..330 246 31 Plus
aralar1-PA 682 CG2139-PA 335..605 41..330 246 31 Plus
aralar1-PF 694 CG2139-PF 335..605 41..330 246 31 Plus
aralar1-PC 695 CG2139-PC 348..618 41..330 246 31 Plus
aralar1-PE 707 CG2139-PE 360..630 41..330 246 31 Plus
CG5254-PA 306 CG5254-PA 34..295 56..326 238 27.6 Plus
CG9582-PB 300 CG9582-PB 32..298 55..335 235 28.3 Plus
CG9582-PA 300 CG9582-PA 32..298 55..335 235 28.3 Plus
MME1-PA 299 CG3476-PA 8..291 30..326 222 25 Plus
colt-PD 306 CG3057-PD 5..298 26..331 218 26 Plus
colt-PA 306 CG3057-PA 5..298 26..331 218 26 Plus
Dic2-PC 304 CG4323-PC 20..285 40..333 216 27.1 Plus
Dic2-PA 304 CG4323-PA 20..285 40..333 216 27.1 Plus
CG5254-PB 237 CG5254-PB 3..226 92..326 204 27.4 Plus
CG6893-PB 250 CG6893-PB 6..238 79..329 203 25.7 Plus
GC1-PB 321 CG18347-PB 40..298 55..316 196 25.6 Plus
GC1-PA 321 CG18347-PA 40..298 55..316 196 25.6 Plus
CG8026-PB 304 CG8026-PB 27..206 146..329 195 27.6 Plus
CG8026-PD 322 CG8026-PD 27..206 146..329 195 27.6 Plus
Tpc2-PB 323 CG2857-PB 19..304 46..330 191 22.8 Plus
sea-PE 317 CG6782-PE 50..306 53..326 186 24.6 Plus
sea-PD 317 CG6782-PD 50..306 53..326 186 24.6 Plus
sea-PC 317 CG6782-PC 50..306 53..326 186 24.6 Plus
sea-PA 317 CG6782-PA 50..306 53..326 186 24.6 Plus
CG2616-PB 449 CG2616-PB 215..420 17..231 183 26.8 Plus
CG2616-PA 449 CG2616-PA 215..420 17..231 183 26.8 Plus
CG8026-PD 322 CG8026-PD 38..305 52..331 180 24.7 Plus
Tpc2-PB 323 CG2857-PB 107..308 32..234 180 24.9 Plus
CG32103-PD 350 CG32103-PD 64..346 43..333 177 22.9 Plus
CG32103-PC 363 CG32103-PC 77..359 43..333 177 22.9 Plus
CG2616-PB 449 CG2616-PB 90..420 36..331 175 23.7 Plus
CG2616-PA 449 CG2616-PA 90..420 36..331 175 23.7 Plus
CG8026-PB 304 CG8026-PB 38..302 52..328 170 24.2 Plus
aralar1-PB 679 CG2139-PB 416..608 29..236 166 29.6 Plus
aralar1-PD 682 CG2139-PD 419..611 29..236 166 29.6 Plus
aralar1-PA 682 CG2139-PA 419..611 29..236 166 29.6 Plus
aralar1-PF 694 CG2139-PF 419..611 29..236 166 29.6 Plus
aralar1-PC 695 CG2139-PC 432..624 29..236 166 29.6 Plus
aralar1-PE 707 CG2139-PE 444..636 29..236 166 29.6 Plus
Dic3-PA 287 CG11196-PA 15..185 148..330 159 25.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:41:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17535-PA 338 GI17535-PA 25..338 24..337 982 54.5 Plus
Dmoj\GI15324-PA 379 GI15324-PA 80..379 51..337 773 47.5 Plus
Dmoj\GI17536-PA 334 GI17536-PA 38..334 39..337 667 41.8 Plus
Dmoj\GI13724-PA 305 GI13724-PA 16..305 46..331 426 32.3 Plus
Dmoj\GI19085-PA 307 GI19085-PA 22..297 56..332 388 29.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:41:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19096-PA 336 GL19096-PA 18..336 23..337 784 47.5 Plus
Dper\GL14753-PA 369 GL14753-PA 59..369 40..337 761 45.2 Plus
Dper\GL19094-PA 335 GL19094-PA 37..335 37..337 700 42.9 Plus
Dper\GL19095-PA 255 GL19095-PA 64..255 146..337 548 50.5 Plus
Dper\GL16987-PA 306 GL16987-PA 14..299 46..332 399 30.2 Plus
Dper\GL16987-PA 306 GL16987-PA 3..196 140..329 163 25.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:41:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25345-PA 336 GA25345-PA 18..336 23..337 786 47.5 Plus
Dpse\GA19634-PA 367 GA19634-PA 57..367 40..337 767 44.9 Plus
Dpse\GA25344-PA 337 GA25344-PA 18..337 23..337 765 44.7 Plus
Dpse\GA21513-PA 335 GA21513-PA 37..335 37..337 701 42.9 Plus
Dpse\GA20254-PA 303 GA20254-PA 16..303 46..331 449 33.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:41:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18586-PA 337 GM18586-PA 1..337 1..337 1768 97.6 Plus
Dsec\GM18585-PA 335 GM18585-PA 38..335 38..337 661 41.3 Plus
Dsec\GM22858-PA 267 GM22858-PA 44..250 40..247 491 43.3 Plus
Dsec\GM25293-PA 303 GM25293-PA 16..303 46..331 441 33.8 Plus
Dsec\GM21513-PA 304 GM21513-PA 12..297 46..332 383 29.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:41:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23374-PA 336 GD23374-PA 21..336 22..337 1617 95.6 Plus
Dsim\GD23373-PA 335 GD23373-PA 38..335 38..337 660 41.3 Plus
Dsim\GD14942-PA 160 GD14942-PA 2..160 179..337 471 50.3 Plus
Dsim\GD14324-PA 303 GD14324-PA 16..303 46..331 441 33.8 Plus
Dsim\GD11025-PA 307 GD11025-PA 12..297 46..332 396 30.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:41:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15429-PA 332 GJ15429-PA 17..332 21..337 1090 60.3 Plus
Dvir\GJ15435-PA 330 GJ15435-PA 32..330 39..337 821 48.8 Plus
Dvir\GJ17214-PA 328 GJ17214-PA 3..324 10..333 798 47.2 Plus
Dvir\GJ14761-PA 379 GJ14761-PA 73..379 40..337 778 46.5 Plus
Dvir\GJ15433-PA 334 GJ15433-PA 36..334 37..337 702 43.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16380-PA 359 GK16380-PA 60..359 40..337 786 46.9 Plus
Dwil\GK14710-PA 365 GK14710-PA 28..365 14..337 675 41.5 Plus
Dwil\GK10490-PA 304 GK10490-PA 16..304 46..331 430 32.4 Plus
Dwil\GK22044-PA 306 GK22044-PA 15..300 46..332 387 28.4 Plus
Dwil\GK11904-PA 326 GK11904-PA 20..310 32..330 375 31.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:41:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25777-PA 338 GE25777-PA 1..338 1..337 1726 95.3 Plus
Dyak\GE17690-PA 340 GE17690-PA 44..340 40..337 802 48.3 Plus
Dyak\GE25767-PA 335 GE25767-PA 38..335 38..337 654 40.7 Plus
Dyak\GE21842-PA 303 GE21842-PA 16..303 46..331 440 33.1 Plus
Dyak\GE13559-PA 307 GE13559-PA 12..297 46..332 417 31.2 Plus

IP15246.hyp Sequence

Translation from 31 to 1044

> IP15246.hyp
MGKGVNTVFRPAEWDNSEEKERPKLEYLVTNKKTPPVELYLTAFASACSA
EIVGYPFDMCKTRMQIQGEIASRVGQKAKYRGLLATAMGIVREEGLLKLY
GGISAMLFRHSLFSGIKMLTYDYMREKMIVPDEDGRPQLSFLGSCISGVL
AGATASVLTNPTELIKIQMQMEGQRRLRGEPPRIHNVLQALTSIYRTGGV
VGLWKGTVPNTWRSALVTIGDVSCYDFCKRFLIAEFDLVDNREVQFVAAM
TAGVADAILSLPADVVKSRIMNQPTDEQGRGIHYKGSLDCLSRLVREEGF
LAMYKGFIPYWMRVGPASVVFWMTFEQIRRFRGSEGY*

IP15246.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
Ucp4B-PA 337 CG18340-PA 1..337 1..337 1752 100 Plus
Ucp4B-PB 222 CG18340-PB 1..221 1..221 1137 99.5 Plus
Ucp4B-PC 228 CG18340-PC 1..219 1..219 1129 100 Plus
Ucp4A-PB 340 CG6492-PB 44..340 40..337 772 48 Plus
Ucp4A-PA 340 CG6492-PA 44..340 40..337 772 48 Plus