Clone IP15317 Report

Search the DGRC for IP15317

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:153
Well:17
Vector:pOT2
Associated Gene/Transcripthth-RG
Protein status:IP15317.pep: wuzgold
Sequenced Size:2632

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
hth 2008-04-29 Release 5.5 accounting
hth 2008-08-15 Release 5.9 accounting
hth 2008-12-18 5.12 accounting

Clone Sequence Records

IP15317.complete Sequence

2632 bp (2632 high quality bases) assembled on 2006-09-20

GenBank Submission: BT029117

> IP15317.complete
TTTTGTATTTTGCTCTAGGCCTAGGCCACGACAATCTTGAACATTTGTTT
GTTCACAATATGGCCAGGCCGTGGCACTTTTGACAACTTGACAGTCGTGC
AGACAGTCCGCGGTGGAAGGGGGGAGTTATAGCCGGGCCAGGAGGCGGAA
GAATCCGGACAAGACGGGGGCTGACAATGTCTGCCTTTGGCATTGGCCAT
GGCTGTATCGTCTGGCGCATTTAATGGCCAGGCGTGTCAATTTAAAGCGA
CATTTATAACCAATTTGTAATCAATTCTAACAATCAGCTAACGCATCACC
CCACCAACCCCAGCCATACCCTTTTCTATTCCGGAATGAATTTACTTATT
CATATTGTGTGATTTATTCTTTACTTGCAGCGGCCGCCGAGCTCATCGCT
GTCCTACGGCGGCGCAATGAACGATGACGCCCGATCGCCGGGCGCTGGTA
GTACTCCCGGTCCACTGTCACAGCAGCCACCTGCCCTAGATACATCAGAC
CCTGATGGACGATGGTGTCGAAGAGAATGGTCCTCACCTGCCGATGCTCG
CAATGCAGACGCTTCCCGGCGATTGTATTCCTCAGTCTTCCTCGGTAGTC
CTGACAATTTCGGAACGAGTGCAAGCGGTGATGCCAGCAATGCCAGCATA
GGAAGTGGAGAGGGCACCGGCGAGGAGGACGACGATGCGAGCGGCAAAAA
GAACCAAAAGAAACGTGGCATTTTCCCAAAAGTAGCAACCAACATATTGA
GAGCGTGGCTGTTTCAGCATTTAACGCATCCCTACCCATCCGAGGACCAG
AAGAAACAATTGGCCCAGGACACCGGCCTAACGATACTGCAAGTGAATAA
TTGGTTCATCAATGCGCGGCGGAGAATTGTCCAGCCAATGATCGATCAAT
CGAATCGTGCAGTCTATACACCGCATCCAGGTCCCTCCGGATATGGCCAC
GACGCCATGGGCTACATGATGGACAGCCAGGCGCATATGATGCACCGTCC
GCCCGGAGATCCGGGCTTCCACCAGGGCTATCCGCATTACCCGCCCGCCG
AGTACTACGGCCAGCACTTGTAATCCTCGTAATCCGGCCCCGACCCGGAA
CCGGAAATGAAACTGGAACTGGAACCAGAGAGCTCTCCGCCGGAAGCGAT
CAAGCCAAAATCATAGCTTAAATTTTACCACCACCCAACACTGGAGACGA
ACGACGAAGGAAGAAGTACGAAGGAGCTGAATACACATGGATCCGATCCC
AAAACTAAAGCATACCGCGTGGCAATATCAGTCAAGTAATAGCAAACAAA
AAACAACAAGCAAAGAACAACAATCGTAGTAAAATCTATACAAAATGATA
TTAGCTAAGCAACAGCGACAAAAACAACAATAACAACAAAAGAAACAGCA
GAATCCAGAACAACAAAAAGCACCAGCAACAACAAACCACATCAAAAAGA
AACCCAGAAATTTTAAAAGAAACTATTTGTGTATACCCTAAACGTAAATA
ACAAAAGCAGAAAAAAAAGGGAAAATAAAAGCAAGAAAAAAGAAATATTT
ATGCATAAACAAAAATGAAACGCTTAGCTATAAGTTAAATAAACAAAACA
AAACCAGAACTCACACACACACAGACACACCGAGACGCAACACAACAATT
TGAAATGCAAATTTTTATGTTCAAAGCTGCAGAGTGCAAAACACAACATT
TTAAAGCATGAATTTAGGCGTAGTCCAGAAAGGATACAAAATTGAAAAGG
ATATACAAAATTTAAGCGACATTTCGTTCGGATTTGTTATAGATTTTAGT
TTGAATTTAGGAAATGCCCCGCCCCACCAGAAAATCAAGGGAAAACCAAA
CCAATAGCAGCAGCGAAATTCGATCAAGTTTGAATATAATTTGCGCAATG
GAAGGACGAGAGGAGAATTCTTTGCTAGTTCTTAGTTTCATTTTAGTTAT
GTAACAAGTCAGTTGTAGTAACGCTTTGTTTTCTTTACCTTTACGCATAT
GTATATGTACATACAAAACAAATCGGTAACAAACTATAGATACATACGTA
CATCTATGCTTAGGCGATAGCACCCTACTATATCCTACGTTTAGACGATT
AATTTAAATAAATTGAATTGTTTTCTAATTTTATGCCTTGCAACACTTAA
GTAAAAACGAAATGGAATTTAATTTTTACAAAAGGGAAAGATGATAACTA
GAGGAGGAACATCATATGATTTGAATTTGTTTTAGAGTTTTCATTGTGTG
CGGATCTTGTAGTATTATTTTCCAACTGAAGCACATGGACCGATTGAATA
TATATATTAATATGTATATGTATGGATTTTATGCGAGATACAAACAATAC
GATACAAATAATGGCATAGGCATATACATAACTCTGAATATGTATACGTA
ATATTAATAATAAATTATGCTTACGTTTAAACTGTACTTTTATTTATGTA
TTCTAATTTGTATGCGTTAATCCTTAGTTAACTATTATTATTATTATTAC
ATTTACTTAATTAATGATTTAAATTTAACTAATTCAAGAGGATAGAATTG
TACGAGAGATGATTTATTGATGAAAACAAAATGCATATATGAGAAAATAT
TTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

IP15317.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:15:26
Subject Length Description Subject Range Query Range Score Percent Strand
hth-RG 2603 hth-RG 1..2603 1..2603 13015 100 Plus
hth-RC 4714 hth-RC 2599..4705 503..2609 10535 100 Plus
hth.f 4714 hth.f 2599..4705 503..2609 10535 100 Plus
hth-RC 4714 hth-RC 2432..2559 381..508 640 100 Plus
hth.f 4714 hth.f 2432..2559 381..508 640 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:38:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 6335538..6337231 2603..910 8425 99.8 Minus
chr3R 27901430 chr3R 6387556..6388058 504..1 2455 99.6 Minus
chr3R 27901430 chr3R 6346749..6346898 776..627 750 100 Minus
chr3R 27901430 chr3R 6359564..6359660 603..507 485 100 Minus
chr3R 27901430 chr3R 6339957..6340036 855..776 400 100 Minus
chr3R 27901430 chr3R 6337450..6337509 912..853 300 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:24:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:38:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10509841..10511540 2609..910 8500 100 Minus
3R 32079331 3R 10561909..10562412 504..1 2520 100 Minus
3R 32079331 3R 10521072..10521221 776..627 750 100 Minus
3R 32079331 3R 10533911..10534007 603..507 485 100 Minus
3R 32079331 3R 10514266..10514345 855..776 400 100 Minus
3R 32079331 3R 10511759..10511818 912..853 300 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 10250672..10252371 2609..910 8500 100 Minus
3R 31820162 3R 10302740..10303243 504..1 2520 100 Minus
3R 31820162 3R 10261903..10262052 776..627 750 100 Minus
3R 31820162 3R 10274742..10274838 603..507 485 100 Minus
3R 31820162 3R 10255097..10255176 855..776 400 100 Minus
3R 31820162 3R 10252590..10252649 912..853 300 100 Minus
Blast to na_te.dros performed 2019-03-15 19:38:57
Subject Length Description Subject Range Query Range Score Percent Strand
transib1 2167 transib1 TRANSIB1 2167bp 1831..1968 2220..2349 130 60.4 Plus
Dbuz\ISBu2 726 Dbuz\ISBu2 ISBU2 726bp 273..338 1793..1726 119 66.2 Minus
G3 4605 G3 G3 4605bp 4487..4533 2283..2328 115 74.5 Plus

IP15317.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:40:07 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 6335538..6336570 1571..2603 95 == Minus
chr3R 6336645..6336705 1436..1496 100 == Minus
chr3R 6336782..6337228 913..1359 100 <- Minus
chr3R 6337450..6337508 854..912 100 <- Minus
chr3R 6339959..6340035 777..853 100 <- Minus
chr3R 6346749..6346897 628..776 100 <- Minus
chr3R 6355092..6355115 604..627 100 <- Minus
chr3R 6359564..6359659 508..603 100 <- Minus
chr3R 6387552..6388052 7..507 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:48:14 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RA 727..1419 381..1073 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:26:20 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RH 685..1377 381..1073 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:13:35 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RA 727..1419 381..1073 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:46:22 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RA 727..1419 381..1073 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:04:19 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RA 727..1419 381..1073 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:48:14 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RA 1979..4201 381..2603 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:26:20 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RG 1..2603 1..2603 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:13:35 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RG 1..2603 1..2603 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:46:22 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RA 1979..4201 381..2603 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:04:19 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
hth-RA 2004..4226 381..2603 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:40:07 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10509847..10511537 913..2603 100 <- Minus
3R 10511759..10511817 854..912 100 <- Minus
3R 10514268..10514344 777..853 100 <- Minus
3R 10521072..10521220 628..776 100 <- Minus
3R 10529439..10529462 604..627 100 <- Minus
3R 10533911..10534006 508..603 100 <- Minus
3R 10561905..10562412 1..507 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:40:07 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10509847..10511537 913..2603 100 <- Minus
3R 10511759..10511817 854..912 100 <- Minus
3R 10514268..10514344 777..853 100 <- Minus
3R 10521072..10521220 628..776 100 <- Minus
3R 10529439..10529462 604..627 100 <- Minus
3R 10533911..10534006 508..603 100 <- Minus
3R 10561905..10562412 1..507 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:40:07 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10509847..10511537 913..2603 100 <- Minus
3R 10511759..10511817 854..912 100 <- Minus
3R 10514268..10514344 777..853 100 <- Minus
3R 10521072..10521220 628..776 100 <- Minus
3R 10529439..10529462 604..627 100 <- Minus
3R 10533911..10534006 508..603 100 <- Minus
3R 10561905..10562412 1..507 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:13:35 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6335569..6337259 913..2603 100 <- Minus
arm_3R 6337481..6337539 854..912 100 <- Minus
arm_3R 6339990..6340066 777..853 100 <- Minus
arm_3R 6346794..6346942 628..776 100 <- Minus
arm_3R 6355161..6355184 604..627 100 <- Minus
arm_3R 6359633..6359728 508..603 100 <- Minus
arm_3R 6387627..6388134 1..507 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:53:13 Download gff for IP15317.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10261903..10262051 628..776 100 <- Minus
3R 10270270..10270293 604..627 100 <- Minus
3R 10274742..10274837 508..603 100 <- Minus
3R 10250678..10252368 913..2603 100 <- Minus
3R 10252590..10252648 854..912 100 <- Minus
3R 10255099..10255175 777..853 100 <- Minus
3R 10302736..10303243 1..507 99   Minus

IP15317.pep Sequence

Translation from 416 to 1072

> IP15317.pep
MNDDARSPGAGSTPGPLSQQPPALDTSDPDGRWCRREWSSPADARNADAS
RRLYSSVFLGSPDNFGTSASGDASNASIGSGEGTGEEDDDASGKKNQKKR
GIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINA
RRRIVQPMIDQSNRAVYTPHPGPSGYGHDAMGYMMDSQAHMMHRPPGDPG
FHQGYPHYPPAEYYGQHL*

IP15317.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17520-PA 487 GF17520-PA 255..487 1..218 1148 93.6 Plus
Dana\GF12447-PA 580 GF12447-PA 110..172 97..159 189 52.4 Plus
Dana\GF20172-PA 376 GF20172-PA 239..295 97..153 154 47.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:34:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17283-PA 487 GG17283-PA 255..487 1..218 1148 93.6 Plus
Dere\GG22573-PA 562 GG22573-PA 106..168 97..159 190 52.4 Plus
Dere\GG17938-PA 376 GG17938-PA 239..295 97..153 154 47.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:34:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19106-PA 456 GH19106-PA 240..456 1..218 1155 99.1 Plus
Dgri\GH20569-PA 583 GH20569-PA 98..166 88..159 188 50 Plus
Dgri\GH17639-PA 374 GH17639-PA 237..293 97..153 154 47.4 Plus
Dgri\GH14716-PA 733 GH14716-PA 227..292 83..154 145 41.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:02
Subject Length Description Subject Range Query Range Score Percent Strand
hth-PA 472 CG17117-PA 255..472 1..218 1199 100 Plus
hth-PC 487 CG17117-PC 255..487 1..218 1173 93.6 Plus
achi-PA 426 CG8819-PA 94..156 97..159 181 52.4 Plus
achi-PD 555 CG8819-PD 94..156 97..159 181 52.4 Plus
achi-PC 555 CG8819-PC 94..156 97..159 181 52.4 Plus
vis-PA 424 CG8821-PA 92..154 97..159 179 52.4 Plus
vis-PB 524 CG8821-PB 92..154 97..159 179 52.4 Plus
exd-PE 376 CG8933-PE 239..372 97..203 155 30.6 Plus
exd-PD 376 CG8933-PD 239..372 97..203 155 30.6 Plus
exd-PA 376 CG8933-PA 239..372 97..203 155 30.6 Plus
exd-PB 376 CG8933-PB 239..372 97..203 155 30.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:34:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23559-PA 472 GI23559-PA 240..472 1..218 1148 93.1 Plus
Dmoj\GI19763-PA 578 GI19763-PA 106..168 97..159 192 54 Plus
Dmoj\GI14777-PA 221 GI14777-PA 93..153 99..159 168 50.8 Plus
Dmoj\GI16078-PA 375 GI16078-PA 237..293 97..153 154 47.4 Plus
Dmoj\GI12262-PA 718 GI12262-PA 246..311 83..154 144 41.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:34:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23828-PA 266 GL23828-PA 50..266 1..218 1145 98.6 Plus
Dper\GL10213-PA 557 GL10213-PA 111..173 97..159 193 54 Plus
Dper\GL10055-PA 266 GL10055-PA 129..185 97..153 154 47.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:34:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14330-PD 460 GA14330-PD 241..460 1..218 1155 98.2 Plus
Dpse\GA14330-PA 457 GA14330-PA 241..457 1..218 1152 98.6 Plus
Dpse\GA14330-PG 471 GA14330-PG 255..471 1..218 1150 98.6 Plus
Dpse\GA14330-PB 471 GA14330-PB 255..471 1..218 1150 98.6 Plus
Dpse\GA14330-PH 217 GA14330-PH 1..217 1..218 1139 98.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:34:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26167-PA 487 GM26167-PA 255..487 1..218 1148 93.6 Plus
Dsec\GM20355-PA 549 GM20355-PA 92..154 97..159 191 52.4 Plus
Dsec\GM20354-PA 532 GM20354-PA 66..137 86..159 160 43.2 Plus
Dsec\GM11678-PA 376 GM11678-PA 239..295 97..153 154 47.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:34:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20718-PA 487 GD20718-PA 255..487 1..218 1148 93.6 Plus
Dsim\GD25834-PA 535 GD25834-PA 92..154 97..159 191 52.4 Plus
Dsim\GD17261-PA 376 GD17261-PA 239..295 97..153 154 47.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:34:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23538-PA 470 GJ23538-PA 254..470 1..218 1154 99.1 Plus
Dvir\GJ18217-PA 501 GJ18217-PA 106..168 97..159 187 52.4 Plus
Dvir\GJ18823-PA 212 GJ18823-PA 100..160 99..159 168 50.8 Plus
Dvir\GJ15726-PA 374 GJ15726-PA 237..293 97..153 154 47.4 Plus
Dvir\GJ15917-PA 374 GJ15917-PA 237..293 97..153 154 47.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:34:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22581-PA 486 GK22581-PA 254..486 1..218 1146 93.1 Plus
Dwil\GK17831-PA 559 GK17831-PA 97..159 97..159 192 52.4 Plus
Dwil\GK20113-PA 376 GK20113-PA 239..295 97..153 154 47.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:34:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24684-PA 487 GE24684-PA 255..487 1..218 1148 93.6 Plus
Dyak\GE13442-PA 566 GE13442-PA 106..168 97..159 189 52.4 Plus
Dyak\GE17244-PA 375 GE17244-PA 239..295 97..153 154 47.4 Plus

IP15317.hyp Sequence

Translation from 887 to 1072

> IP15317.hyp
MIDQSNRAVYTPHPGPSGYGHDAMGYMMDSQAHMMHRPPGDPGFHQGYPH
YPPAEYYGQHL*

IP15317.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:16:21
Subject Length Description Subject Range Query Range Score Percent Strand
hth-PA 472 CG17117-PA 412..472 1..61 362 100 Plus
hth-PC 487 CG17117-PC 427..487 1..61 362 100 Plus