Clone IP15509 Report

Search the DGRC for IP15509

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:155
Well:9
Vector:pOT2
Associated Gene/TranscriptCG1637-RB
Protein status:IP15509.pep: gold
Sequenced Size:2122

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1637 2008-04-29 Release 5.5 accounting
CG1637 2008-08-15 Release 5.9 accounting
CG1637 2008-12-18 5.12 accounting

Clone Sequence Records

IP15509.complete Sequence

2122 bp (2122 high quality bases) assembled on 2006-03-08

GenBank Submission: BT024960

> IP15509.complete
CGCAAGCGAATTTGTCGATTCCCCCGTTTAACTCCAACGACTCCCCGAGC
CAAGTGTCCCCACTTTGACAACGACGCAATTGTGATTTGGCAATGTTTTT
GCTGACTGCGTTACTGTGCAACAACAAACACAAGTAAATACAAAACGGTA
AAAATGCAGAGACTGCAATTCGCTCTGCTAGCGTCGCTGCTCCTGCTGGT
GCTGCTTCTTCCGGGGATTAGGAGCACTCCCATCGACCAGGACGTCGACA
TTGTTCACTATCAGCCGGAGCAAGTGCATCTGTCCTTTGGAGAACGCACC
GATAGCGAGATAGTCGTCACTTGGTCCACGCGCAGCCTGCCGCCGGATCA
GGAAGTGGGTGCGGTCAGCGTGGTGGAGTACGGTCAACTGGTAGACGGAC
AGGTCAGGCTCACCCAACAGGCCCGGGGAAAGGCTACTAAATTCGTGGAC
GGCGGTCACAAGCAGGCCACGCAGTTCATCCACAGGGTGACGCTTAGGGA
CCTGGAGCCAAATGCCACATACTCTTACCATTGCGGTAGCGATTTTGGCT
GGTCGGCCATCTTCCAGTTTCGCACAGTGCCCTCGGCATCCGTTGACTGG
TCGCCATCGCTGGCTATCTACGGGGATATGGGCAATGAGAATGCCCAATC
CCTGGCCCGATTGCAGCAGGAGACGCAGCGCGGCATGTACGATGCCATCA
TCCATGTGGGTGACTTCGCCTACGACATGAACACGAAGAATGCTCGCGTG
GGGGATGAGTTTATGCGGCAGATCGAAACGGTGGCTGCCTACCTGCCATA
CATGGTGGTTCCCGGCAATCACGAGGAGAAGTTCAACTTCTCGAACTATC
GTGCCCGCTTCAGTATGCCGGGAGGTACGGAGAACATGTTCTACAGCTTC
GATCTGGGACCCGTGCACTTCGTGGGCATTAGCACGGAGGTCTACTACTT
TCTCAACTATGGTTTAAAGCCGCTGGTATTCCAGTTCGAATGGTTGCGTG
AGGATCTGGCCAAGGCCAATCTGCCAGAGAATCGGAACAAGCGTCCGTGG
ATCATCTTGTACGGTCATCGACCCATGTACTGCAGCAACGAGAACGACAA
TGACTGCACCCACTCAGAGACTCTCACGCGGGTGGGCTGGCCATTTGTAC
ACATGTTCGGATTGGAGCCGCTGCTTTACGAGTTCGGCGTGGACGTGGCC
ATTTGGGCGCACGAGCACTCCTACGAGAGACTCTGGCCCATTTACGATTA
CAAGGTGCGCAATGGAACGCTGAAGGATTCGCCGTACAATGATCCTAGTG
CCCCTGTGCACATCGTCACAGGATCCGCCGGCTGCAAGGAGGGAAGAGAA
CCATTCAAGGGCAAAATACCCGAATGGAGCGCTTTTCACAGCCAGGACTA
TGGTTACACACGGCTCAAGGCTCACAATCGAACACATATCCATTTCGAGC
AGGTGTCCGACGACAAGAACGGCGCCATCATCGATGACTTTTGGTTGGTG
AAATCCAAGCATGGAAGCTACCGAAACTAAATAGTCATTCCCAATCTGAA
CCATAACCTGAGCCGAATCAATTCAAGCTAAAGGAGTCTCTCGAGGCATT
ACACGCATCAATAGCAACAGGCAGTATTAGTAGCGCACATTCGCCTCGAC
CTGATTCGATCACAAACTATAGCAATAAGCGTGGCACATTCCTTATCCAA
ATATCTCAACCCAGCCCGAAACAAACTACAGTTTTATACTTAGCCAATTT
AACAAACGCAGCATTTACACATATGCAAGCGCTTTTAAGTGTGCATTTAA
CATAAGCTGATAAGAACGTAAATGAACTTAGTTTCTTATCTCTGTCGCAT
GTTACTTGATGTTCAAAAACTGGTACTCGGTAACTGCTGTCTTAAGCAAA
TTGTTTTTAATGTGTATGGGATGTACTTGATATACTTATTAGGATCAATG
TTAAAGGACTAATGGATATGCACCCGATCGGTTTTTATTATCAATAAGTA
CATGAAATCCGATTACCGGGTTTATTATAGTCACGGCAATCCGATTGTAC
ACTGATTGTTGTTTAAATGCCTAGTATCTTTACAATAAATGTCTTGAACT
TTTCAAAAAAAAAAAAAAAAAA

IP15509.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:46:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG1637-RB 2319 CG1637-RB 210..2314 1..2105 10525 100 Plus
CG1637.a 2208 CG1637.a 102..2208 1..2104 10465 99.8 Plus
CG1637-RC 1837 CG1637-RC 210..502 1..293 1465 100 Plus
CG1637-RC 1837 CG1637-RC 777..1099 598..920 760 82.3 Plus
CG1637-RC 1837 CG1637-RC 1185..1270 1006..1091 280 88.3 Plus
CG1637-RC 1837 CG1637-RC 1596..1657 1417..1478 160 83.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:37:58
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 10765211..10766481 2104..834 6355 100 Minus
chrX 22417052 chrX 10766552..10766899 833..486 1740 100 Minus
chrX 22417052 chrX 10768725..10769016 292..1 1370 97.9 Minus
chrX 22417052 chrX 10767112..10767309 488..291 990 100 Minus
chrX 22417052 chrX 10762841..10763075 832..598 560 82.6 Minus
chrX 22417052 chrX 10762519..10762776 1091..834 465 78.7 Minus
chrX 22417052 chrX 10764448..10764685 832..595 320 75.6 Minus
chrX 22417052 chrX 10763688..10764341 1515..859 310 70.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:24:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:37:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10873899..10875170 2105..834 6360 100 Minus
X 23542271 X 10875241..10875588 833..486 1740 100 Minus
X 23542271 X 10877415..10877706 292..1 1460 100 Minus
X 23542271 X 10875801..10875998 488..291 990 100 Minus
X 23542271 X 10871530..10871764 832..598 560 82.6 Minus
X 23542271 X 10871208..10871465 1091..834 465 78.7 Minus
X 23542271 X 10873137..10873374 832..595 320 75.6 Minus
X 23542271 X 10872377..10873030 1515..859 310 70.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:36:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 10881997..10883268 2105..834 6360 100 Minus
X 23527363 X 10883339..10883686 833..486 1740 100 Minus
X 23527363 X 10885513..10885804 292..1 1460 100 Minus
X 23527363 X 10883899..10884096 488..291 990 100 Minus
X 23527363 X 10879628..10879862 832..598 560 82.5 Minus
X 23527363 X 10879306..10879391 1091..1006 280 88.3 Minus
X 23527363 X 10880475..10880615 1515..1375 225 77.3 Minus
X 23527363 X 10881338..10881405 729..662 220 88.2 Minus
X 23527363 X 10881043..10881128 944..859 220 83.7 Minus
X 23527363 X 10879477..10879563 920..834 210 82.7 Minus
X 23527363 X 10880881..10880974 1106..1013 200 80.8 Minus
X 23527363 X 10878860..10878944 1478..1394 170 80 Minus
Blast to na_te.dros performed on 2019-03-16 07:37:57 has no hits.

IP15509.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:38:44 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 10765211..10766481 834..2104 100 <- Minus
chrX 10766552..10766898 487..833 100 <- Minus
chrX 10767114..10767307 293..486 100 <- Minus
chrX 10768725..10769016 1..292 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:59:29 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
CG1637-RB 1..1377 154..1530 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:15:52 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
CG1637-RB 1..1377 154..1530 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:02:05 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
CG1637-RB 1..1377 154..1530 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:00:20 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
CG1637-RB 1..1377 154..1530 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:38:28 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
CG1637-RB 1..1377 154..1530 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:14:24 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
CG1637-RB 102..1631 1..1530 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:15:52 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
CG1637-RB 102..2205 1..2104 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:02:05 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
CG1637-RB 93..2196 1..2104 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:00:21 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
CG1637-RB 102..1631 1..1530 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:38:28 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
CG1637-RB 93..2196 1..2104 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:38:44 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
X 10873900..10875170 834..2104 100 <- Minus
X 10875241..10875587 487..833 100 <- Minus
X 10875803..10875996 293..486 100 <- Minus
X 10877415..10877706 1..292 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:38:44 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
X 10873900..10875170 834..2104 100 <- Minus
X 10875241..10875587 487..833 100 <- Minus
X 10875803..10875996 293..486 100 <- Minus
X 10877415..10877706 1..292 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:38:44 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
X 10873900..10875170 834..2104 100 <- Minus
X 10875241..10875587 487..833 100 <- Minus
X 10875803..10875996 293..486 100 <- Minus
X 10877415..10877706 1..292 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:02:05 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10767933..10769203 834..2104 100 <- Minus
arm_X 10769274..10769620 487..833 100 <- Minus
arm_X 10769836..10770029 293..486 100 <- Minus
arm_X 10771448..10771739 1..292 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:35:52 Download gff for IP15509.complete
Subject Subject Range Query Range Percent Splice Strand
X 10881998..10883268 834..2104 100 <- Minus
X 10883339..10883685 487..833 100 <- Minus
X 10883901..10884094 293..486 100 <- Minus
X 10885513..10885804 1..292 100   Minus

IP15509.pep Sequence

Translation from 153 to 1529

> IP15509.pep
MQRLQFALLASLLLLVLLLPGIRSTPIDQDVDIVHYQPEQVHLSFGERTD
SEIVVTWSTRSLPPDQEVGAVSVVEYGQLVDGQVRLTQQARGKATKFVDG
GHKQATQFIHRVTLRDLEPNATYSYHCGSDFGWSAIFQFRTVPSASVDWS
PSLAIYGDMGNENAQSLARLQQETQRGMYDAIIHVGDFAYDMNTKNARVG
DEFMRQIETVAAYLPYMVVPGNHEEKFNFSNYRARFSMPGGTENMFYSFD
LGPVHFVGISTEVYYFLNYGLKPLVFQFEWLREDLAKANLPENRNKRPWI
ILYGHRPMYCSNENDNDCTHSETLTRVGWPFVHMFGLEPLLYEFGVDVAI
WAHEHSYERLWPIYDYKVRNGTLKDSPYNDPSAPVHIVTGSAGCKEGREP
FKGKIPEWSAFHSQDYGYTRLKAHNRTHIHFEQVSDDKNGAIIDDFWLVK
SKHGSYRN*

IP15509.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:12:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20208-PA 461 GF20208-PA 1..459 1..456 2119 83.4 Plus
Dana\GF20209-PA 404 GF20209-PA 6..400 52..456 1423 64 Plus
Dana\GF20210-PA 411 GF20210-PA 12..407 52..456 1410 63.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:12:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18893-PA 459 GG18893-PA 1..455 1..456 1917 79.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:12:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24658-PA 430 GH24658-PA 7..428 30..458 1947 82.6 Plus
Dgri\GH24660-PA 404 GH24660-PA 8..403 52..456 1406 63.8 Plus
Dgri\GH24659-PA 412 GH24659-PA 4..404 48..458 1386 62.1 Plus
Dgri\GH24661-PA 228 GH24661-PA 1..220 238..458 840 65.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG1637-PB 458 CG1637-PB 1..458 1..458 2479 100 Plus
CG1637-PD 459 CG1637-PD 1..459 1..458 2467 99.8 Plus
CG1637-PE 453 CG1637-PE 1..446 1..458 1659 67.2 Plus
CG1637-PA 453 CG1637-PA 1..446 1..458 1659 67.2 Plus
CG1637-PC 450 CG1637-PC 1..446 1..456 1659 68.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16121-PA 456 GI16121-PA 14..453 8..456 1952 79.6 Plus
Dmoj\GI16123-PA 407 GI16123-PA 11..406 52..456 1407 64.3 Plus
Dmoj\GI16122-PA 402 GI16122-PA 6..400 52..456 1393 62.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14292-PA 462 GL14292-PA 33..460 29..458 2043 85.2 Plus
Dper\GL14294-PA 417 GL14294-PA 20..415 52..456 1450 65.8 Plus
Dper\GL14293-PA 404 GL14293-PA 7..400 52..456 1450 65.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:12:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14064-PA 462 GA14064-PA 33..460 29..458 2043 85.2 Plus
Dpse\GA22738-PA 404 GA22738-PA 7..400 52..456 1453 65.7 Plus
Dpse\GA22739-PA 417 GA22739-PA 20..415 52..456 1452 66 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:12:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11279-PA 449 GM11279-PA 1..445 1..456 1514 67.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:12:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16010-PA 460 GD16010-PA 1..456 1..456 1934 81.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:12:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16400-PA 457 GJ16400-PA 35..454 27..456 1960 83 Plus
Dvir\GJ16401-PA 405 GJ16401-PA 8..403 52..457 1397 63.3 Plus
Dvir\GJ16402-PA 414 GJ16402-PA 18..413 52..456 1396 64.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:12:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25789-PA 454 GK25789-PA 13..451 19..456 1930 79.3 Plus
Dwil\GK25791-PA 407 GK25791-PA 5..407 42..453 1407 63.4 Plus
Dwil\GK25790-PA 410 GK25790-PA 3..407 41..456 1399 61.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:12:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17336-PA 459 GE17336-PA 1..459 1..458 2299 94.3 Plus
Dyak\GE17338-PA 409 GE17338-PA 10..405 52..456 1423 64.7 Plus
Dyak\GE17337-PA 417 GE17337-PA 19..414 52..458 1421 63.9 Plus

IP15509.hyp Sequence

Translation from 153 to 1529

> IP15509.hyp
MQRLQFALLASLLLLVLLLPGIRSTPIDQDVDIVHYQPEQVHLSFGERTD
SEIVVTWSTRSLPPDQEVGAVSVVEYGQLVDGQVRLTQQARGKATKFVDG
GHKQATQFIHRVTLRDLEPNATYSYHCGSDFGWSAIFQFRTVPSASVDWS
PSLAIYGDMGNENAQSLARLQQETQRGMYDAIIHVGDFAYDMNTKNARVG
DEFMRQIETVAAYLPYMVVPGNHEEKFNFSNYRARFSMPGGTENMFYSFD
LGPVHFVGISTEVYYFLNYGLKPLVFQFEWLREDLAKANLPENRNKRPWI
ILYGHRPMYCSNENDNDCTHSETLTRVGWPFVHMFGLEPLLYEFGVDVAI
WAHEHSYERLWPIYDYKVRNGTLKDSPYNDPSAPVHIVTGSAGCKEGREP
FKGKIPEWSAFHSQDYGYTRLKAHNRTHIHFEQVSDDKNGAIIDDFWLVK
SKHGSYRN*

IP15509.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:18:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG1637-PB 458 CG1637-PB 1..458 1..458 2479 100 Plus
CG1637-PD 459 CG1637-PD 1..459 1..458 2467 99.8 Plus
CG1637-PC 450 CG1637-PC 1..446 1..456 1659 68.4 Plus
CG1637-PE 453 CG1637-PE 1..446 1..458 1659 67.2 Plus
CG1637-PA 453 CG1637-PA 1..446 1..458 1659 67.2 Plus