Clone IP15602 Report

Search the DGRC for IP15602

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:156
Well:2
Vector:pOT2
Associated Gene/TranscriptCG3119-RA
Protein status:IP15602.pep: gold
Sequenced Size:1190

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3119 2008-04-29 Release 5.5 accounting
CG3119 2008-08-15 Release 5.9 accounting
CG3119 2008-12-18 5.12 accounting

Clone Sequence Records

IP15602.complete Sequence

1190 bp (1190 high quality bases) assembled on 2006-03-22

GenBank Submission: BT024957

> IP15602.complete
AGAACACAACGCTCGTGGAGAATGACGGCCAAGATGAAGCTGCGGTCCCA
GCTGCATCTGCTCACTGGTTTCATGGCTGGATTCGTGCTGGCCTTCGTGC
TCCTCCTCTACGTCTACGATGTCAGCAGGGTGACGCCCTGCTGGAGCAGC
ACCTCCACCATGACCACGGCCACAACGGCCAGGATTGAGGATGGTCCACC
ACCGCGCATTCTGTGCATGGTGCTCACCTGTCCGGAGAACGTGCAGAGCC
TGGCCAGAAGTGTCTACGAGACCTGGGGCCAGCGCTGCAGCCGCCTGATC
TTCGCCAGCAGCGAGGACTACGAGCCACTGGGCGTGGTCGGTGTGGTGGA
GCCAACTGGCGGTGGCTACGAGGATCTGTGGAATAAAACGCGCGAGGGAT
TCCGACACGTTTGGGAGCACTACGCTGGCGACTACGATTGGTTCCTCAAG
GCAGATGACGATACGTACGTGGTCATGGAGAATCTGCAGCACCTGCTCCG
TGGCTTCGATCCGAATACGCCCGTCTTCTTTGGCTACAAGATGTCGCGAT
ACAATGTGAGTTATATGTCTGGCGGAGCTTCGTATATTCTGAGTCGTGAG
GCCCTACATCGATTTGCAACACAAGCCTATGAATCTGAGGTGATTTGTCC
GCAGCCAAAAAAGATGGGCATCGAGGACTTTTACATGGGAATTTGTATGC
AGAATGTGGGCGTCCACTTTGTCGACTCCACACACGCTTTGGATGGAGAC
ACGAAGCCGAAGTTTATGCCCCTGGATCTGGAGAACTATATGTCGGATGC
GAATTACACAATTCCGGAGTGGCTGCGCCTCATGAGTCTATCTCGAGTTG
AAACGGGCTTGGCCTGCTGTTCCAACTACTCTGTGGCCTTTCATTATGCC
AGTCGAGAACGGATGTTCCTCTACGAGTTTCTAATCTATCATCTGAAAGT
ATTTGATCCTAACCAGATTTCAGAACGCGGACACAGAAGTCGATTAACTT
TATCTGATTTAACGAGAAGATTTCCACTGGAAGATAACTCCAATATAAAA
GACTTGCTGCAAATGTCCGAGAAACCTGATAATTTTTAGTTGCCTATTTG
TTTTTTGGCTTAAGTTATAACGATTGTGATATGAACTAATGAATATATTT
ATGATATTTTTGTTAACCTAAAAAAAAAAAAAAAAAAAAA

IP15602.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:34:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG3119.a 1358 CG3119.a 23..1192 1..1170 5850 100 Plus
CG3119-RA 1325 CG3119-RA 157..1325 1..1169 5845 100 Plus
CG3119-RB 660 CG3119-RB 23..580 1..558 2790 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:18:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2837031..2837496 466..1 2210 98.3 Minus
chr2L 23010047 chr2L 2834570..2834884 1169..855 1575 100 Minus
chr2L 23010047 chr2L 2834940..2835236 854..558 1380 97.6 Minus
chr2L 23010047 chr2L 2836880..2836973 558..465 470 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:25:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:18:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2837344..2837809 466..1 2330 100 Minus
2L 23513712 2L 2834886..2835201 1170..855 1580 100 Minus
2L 23513712 2L 2835254..2835552 856..558 1495 100 Minus
2L 23513712 2L 2837193..2837286 558..465 470 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:25:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2837344..2837809 466..1 2330 100 Minus
2L 23513712 2L 2834886..2835201 1170..855 1580 100 Minus
2L 23513712 2L 2835254..2835552 856..558 1495 100 Minus
2L 23513712 2L 2837193..2837286 558..465 470 100 Minus
Blast to na_te.dros performed on 2019-03-16 05:18:07 has no hits.

IP15602.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:19:05 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2836880..2836973 465..558 100 <- Minus
chr2L 2834570..2834883 856..1169 100 <- Minus
chr2L 2834939..2835235 559..855 97 <- Minus
chr2L 2837033..2837496 1..464 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:59:38 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3119-RA 1..1068 22..1089 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:58:51 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3119-RA 1..1068 22..1089 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:35:14 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3119-RA 1..1068 22..1089 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:39:32 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3119-RA 1..1068 22..1089 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:00:00 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3119-RA 1..1068 22..1089 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:39:37 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3119-RA 23..1191 1..1169 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:58:51 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3119-RA 23..1191 1..1169 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:35:14 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3119-RA 25..1193 1..1169 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:39:32 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3119-RA 23..1111 1..1089 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:00:00 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3119-RA 25..1193 1..1169 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:19:05 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2834887..2835200 856..1169 100 <- Minus
2L 2835255..2835551 559..855 100 <- Minus
2L 2837193..2837286 465..558 100 <- Minus
2L 2837346..2837809 1..464 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:19:05 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2834887..2835200 856..1169 100 <- Minus
2L 2835255..2835551 559..855 100 <- Minus
2L 2837193..2837286 465..558 100 <- Minus
2L 2837346..2837809 1..464 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:19:05 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2834887..2835200 856..1169 100 <- Minus
2L 2835255..2835551 559..855 100 <- Minus
2L 2837193..2837286 465..558 100 <- Minus
2L 2837346..2837809 1..464 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:35:14 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2834887..2835200 856..1169 100 <- Minus
arm_2L 2835255..2835551 559..855 100 <- Minus
arm_2L 2837193..2837286 465..558 100 <- Minus
arm_2L 2837346..2837809 1..464 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:18:18 Download gff for IP15602.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2837193..2837286 465..558 100 <- Minus
2L 2834887..2835200 856..1169 100 <- Minus
2L 2835255..2835551 559..855 100 <- Minus
2L 2837346..2837809 1..464 100   Minus

IP15602.hyp Sequence

Translation from 0 to 1088

> IP15602.hyp
RTQRSWRMTAKMKLRSQLHLLTGFMAGFVLAFVLLLYVYDVSRVTPCWSS
TSTMTTATTARIEDGPPPRILCMVLTCPENVQSLARSVYETWGQRCSRLI
FASSEDYEPLGVVGVVEPTGGGYEDLWNKTREGFRHVWEHYAGDYDWFLK
ADDDTYVVMENLQHLLRGFDPNTPVFFGYKMSRYNVSYMSGGASYILSRE
ALHRFATQAYESEVICPQPKKMGIEDFYMGICMQNVGVHFVDSTHALDGD
TKPKFMPLDLENYMSDANYTIPEWLRLMSLSRVETGLACCSNYSVAFHYA
SRERMFLYEFLIYHLKVFDPNQISERGHRSRLTLSDLTRRFPLEDNSNIK
DLLQMSEKPDNF*

IP15602.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:18:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG3119-PA 355 CG3119-PA 1..355 8..362 1904 100 Plus
CG3119-PB 184 CG3119-PB 1..179 8..186 970 100 Plus
C1GalTA-PA 388 CG9520-PA 100..344 69..318 529 40.6 Plus
C1GalTA-PC 388 CG9520-PC 100..344 69..318 529 40.6 Plus
C1GalTA-PB 388 CG9520-PB 100..344 69..318 529 40.6 Plus

IP15602.pep Sequence

Translation from 21 to 1088

> IP15602.pep
MTAKMKLRSQLHLLTGFMAGFVLAFVLLLYVYDVSRVTPCWSSTSTMTTA
TTARIEDGPPPRILCMVLTCPENVQSLARSVYETWGQRCSRLIFASSEDY
EPLGVVGVVEPTGGGYEDLWNKTREGFRHVWEHYAGDYDWFLKADDDTYV
VMENLQHLLRGFDPNTPVFFGYKMSRYNVSYMSGGASYILSREALHRFAT
QAYESEVICPQPKKMGIEDFYMGICMQNVGVHFVDSTHALDGDTKPKFMP
LDLENYMSDANYTIPEWLRLMSLSRVETGLACCSNYSVAFHYASRERMFL
YEFLIYHLKVFDPNQISERGHRSRLTLSDLTRRFPLEDNSNIKDLLQMSE
KPDNF*

IP15602.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:46:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14916-PA 357 GF14916-PA 1..357 1..355 1464 77 Plus
Dana\GF15693-PA 390 GF15693-PA 101..345 62..311 540 41.4 Plus
Dana\GF14913-PA 452 GF14913-PA 105..349 62..311 467 39 Plus
Dana\GF24418-PA 341 GF24418-PA 64..304 62..311 466 40.2 Plus
Dana\GF14985-PA 384 GF14985-PA 87..364 62..343 441 35.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24483-PA 357 GG24483-PA 1..357 1..355 1714 91 Plus
Dere\GG24047-PA 388 GG24047-PA 100..344 62..311 531 40.6 Plus
Dere\GG10669-PA 453 GG10669-PA 83..341 43..311 480 39.6 Plus
Dere\GG24890-PA 386 GG24890-PA 62..332 48..315 466 37 Plus
Dere\GG14745-PA 342 GG14745-PA 63..340 62..347 463 37.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25125-PA 372 GH25125-PA 19..372 6..355 1206 61.8 Plus
Dgri\GH25123-PA 389 GH25123-PA 101..345 62..311 540 41.4 Plus
Dgri\GH25081-PA 695 GH25081-PA 76..320 62..311 532 41 Plus
Dgri\GH25081-PA 695 GH25081-PA 402..658 62..319 530 40.3 Plus
Dgri\GH25082-PA 347 GH25082-PA 1..312 13..319 521 37.2 Plus
Dgri\GH23406-PA 327 GH23406-PA 57..300 62..311 515 41.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG3119-PA 355 CG3119-PA 1..355 1..355 1904 100 Plus
CG3119-PB 184 CG3119-PB 1..179 1..179 970 100 Plus
C1GalTA-PA 388 CG9520-PA 100..344 62..311 529 40.6 Plus
C1GalTA-PC 388 CG9520-PC 100..344 62..311 529 40.6 Plus
C1GalTA-PB 388 CG9520-PB 100..344 62..311 529 40.6 Plus
CG8708-PC 444 CG8708-PC 89..333 62..311 463 39.8 Plus
CG8708-PD 450 CG8708-PD 95..339 62..311 463 39.8 Plus
CG8708-PB 450 CG8708-PB 95..339 62..311 463 39.8 Plus
CG34056-PA 341 CG34056-PA 3..319 8..330 457 35.3 Plus
CG2975-PA 385 CG2975-PA 55..330 43..315 455 36 Plus
tgy-PE 373 CG7440-PE 98..353 62..319 442 37.6 Plus
tgy-PC 373 CG7440-PC 98..353 62..319 442 37.6 Plus
CG18558-PB 588 CG18558-PB 321..559 62..306 422 37.8 Plus
CG34057-PB 344 CG34057-PB 70..344 62..341 406 35.1 Plus
CG34057-PA 355 CG34057-PA 81..355 62..341 406 35.1 Plus
CG2983-PB 344 CG2983-PB 20..313 2..318 366 30.2 Plus
CG34451-PC 253 CG34451-PC 7..241 73..311 255 27 Plus
CG34451-PA 253 CG34451-PA 7..241 73..311 255 27 Plus
CG34452-PC 318 CG34452-PC 48..298 58..311 245 27.3 Plus
CG34452-PB 318 CG34452-PB 48..298 58..311 245 27.3 Plus
CG9220-PD 832 CG9220-PD 75..243 67..227 179 29.8 Plus
CG9220-PC 832 CG9220-PC 75..243 67..227 179 29.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:46:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12090-PA 356 GI12090-PA 2..356 5..355 1094 58 Plus
Dmoj\GI12045-PA 391 GI12045-PA 101..345 62..311 538 41.4 Plus
Dmoj\GI11429-PA 336 GI11429-PA 59..299 62..311 466 41.7 Plus
Dmoj\GI12068-PA 352 GI12068-PA 55..298 62..311 452 39.5 Plus
Dmoj\GI17446-PA 390 GI17446-PA 90..333 62..311 444 38.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:46:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15450-PA 183 GL15450-PA 1..183 174..355 748 76.5 Plus
Dper\GL25549-PA 390 GL25549-PA 100..344 62..311 534 41.4 Plus
Dper\GL15447-PA 379 GL15447-PA 89..337 62..319 500 40.8 Plus
Dper\GL26713-PA 452 GL26713-PA 103..347 62..311 483 39.8 Plus
Dper\GL15448-PA 597 GL15448-PA 326..568 62..306 467 38.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:46:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA29035-PA 359 GA29035-PA 1..359 1..355 1475 74.9 Plus
Dpse\GA21851-PA 390 GA21851-PA 100..344 62..311 534 41.4 Plus
Dpse\GA28803-PA 347 GA28803-PA 89..337 62..319 498 40.4 Plus
Dpse\GA29031-PA 452 GA29031-PA 103..347 62..311 483 39.8 Plus
Dpse\GA14990-PA 597 GA14990-PA 326..568 62..306 470 38.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:46:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18192-PA 355 GM18192-PA 1..355 1..355 1786 95.8 Plus
Dsec\GM12650-PA 379 GM12650-PA 91..335 62..311 530 40.6 Plus
Dsec\GM18370-PA 383 GM18370-PA 86..328 62..315 462 37.6 Plus
Dsec\GM20714-PA 446 GM20714-PA 17..342 4..311 457 34.8 Plus
Dsec\GM14363-PA 340 GM14363-PA 63..324 62..334 453 37.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:46:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22798-PA 355 GD22798-PA 1..355 1..355 1862 96.1 Plus
Dsim\GD22375-PA 388 GD22375-PA 100..344 62..311 528 40.6 Plus
Dsim\GD10181-PA 446 GD10181-PA 17..342 4..311 470 35.1 Plus
Dsim\GD23186-PA 386 GD23186-PA 86..331 62..315 454 37.1 Plus
Dsim\GD24465-PA 373 GD24465-PA 98..353 62..319 440 37.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:46:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14142-PA 370 GJ14142-PA 12..370 6..355 1229 61.5 Plus
Dvir\GJ14135-PA 386 GJ14135-PA 101..345 62..311 526 41 Plus
Dvir\GJ14141-PA 589 GJ14141-PA 321..564 62..308 490 38.6 Plus
Dvir\GJ14139-PA 441 GJ14139-PA 14..335 6..311 474 34.3 Plus
Dvir\GJ13625-PA 339 GJ13625-PA 2..301 7..311 452 37.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:46:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24756-PA 362 GK24756-PA 1..362 1..355 1268 64.7 Plus
Dwil\GK14790-PA 390 GK14790-PA 101..345 62..311 519 39.8 Plus
Dwil\GK14791-PA 371 GK14791-PA 101..345 62..311 504 39 Plus
Dwil\GK24753-PA 440 GK24753-PA 17..342 4..311 486 33.9 Plus
Dwil\GK24752-PA 435 GK24752-PA 99..343 62..311 483 39 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:46:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15003-PA 355 GE15003-PA 1..355 1..355 1781 92.1 Plus
Dyak\GE10709-PA 388 GE10709-PA 100..344 62..311 532 40.6 Plus
Dyak\GE23251-PA 451 GE23251-PA 98..342 62..311 475 39.4 Plus
Dyak\GE21107-PA 342 GE21107-PA 63..340 62..347 469 38.3 Plus
Dyak\GE18184-PA 385 GE18184-PA 85..365 62..346 468 37 Plus