Clone IP15605 Report

Search the DGRC for IP15605

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:156
Well:5
Vector:pOT2
Associated Gene/Transcriptcu-RE
Protein status:IP15605.pep: gold
Sequenced Size:1853

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
nocturnin 2008-04-29 Release 5.5 accounting
nocturnin 2008-08-15 Release 5.9 accounting
nocturnin 2008-12-18 5.12 accounting

Clone Sequence Records

IP15605.complete Sequence

1853 bp (1853 high quality bases) assembled on 2006-05-24

GenBank Submission: BT025859

> IP15605.complete
ATTTGAACCGCCTGTCAATCTGGATTAGACGCCACCTCGGTTCGCGTAAA
AGCTCGGCGGACACTTTGGTTCCTCATCGATCGCCATCTAACCATGTGTG
GTAGTGCTCTGTAGTGCAGGCTGCAAAATGGAAACACAGATGGGGCCGCG
TCTCTTTGACATTGCCATACTGACACTAAATATAAAACATTTCAAGTTAT
CCTAATATCTAAACAAGAAACCAAGAATCCCAGTTCAAAAGTCAGCAGCC
GAAAGATAGCAAACTGAAAGTGATATTCGAGTTGGGACAAGCGTTAAGTT
TGCACAAAAAGTTCAAAATGGAGTTTCTAATGAAAACGTCGCGTTTGATC
GTCACATCGAAGACGTTCGCAAGACGTGTGGCCGTTCCGATTCCCAGAAT
GGGTTCATTTAACTCGGCCCCAAAGATCAACAATGTGGACTCCCAGGACG
ATGGCCTGGTACTGCCCTCCGGTCTAAGCACCCCGGCTCTTCTCCAGCAT
GTCCAGCAACTGCGTGGCGGTGGCATCGAGCAGCCATCGCTGCTCACCCG
CGGCTTCCTAAAACCGCTGCTGGCGGACGAGGATGTAGCCGACGGACTGC
GATGCCTCAAGCTGAATTCCGTGTCGAGGGTTTGCAGTGCGCCAGTCGAG
GGTGATGACATTCGATTGCTGCAGTGGAACATCCTATCACAAACTCTCGG
GCAGCACAACGATGGATTTGTGCGCTGTCCCGAGGAGGCTCTCACCTGGG
AGCACCGCAAGTACCTGATTGTCCAGGAGATTCTGCAGAACCAGCCCGAT
GTGATTTGTCTGCAAGAGGTAGACCACTTCAAGTTTCTGCAGACCGTGTT
GGGTAGCCAGAACTACGCAGGCATCTTCTTCCCGAAACCGGATTCCCCGT
GCCTGTACATCGAGCAGAACAATGGACCCGATGGCTGTGCCATCTTCTAC
AAGAGGGACAAACTGCAGCTGCAGGGATACGATACGAGGATCCTGGAAGT
GTGGCGGGTGCAGAGCAACCAGGTGGCCATCGCGGCCCGGCTGCGTATGC
GATCCAGTGGTCGGGAATTCTGTGTGGCCACCACCCACTTAAAGGCCCGC
CATGGCGCCCTTTTGGCGAAATTACGGAACGAACAGGGACGTGATCTCAT
TAGGTTTGTGAAGCAGTTTGCCGGAGATACGCCGCTGCTGCTCTGCGGCG
ATTTCAATGCCGAACCGGTGGAGCCAATCTATGCCACGATCTTGGGATGT
GATCTCCTCCGCTTGGGCAGCGCCTATGCCGACGTGAAGCTAGACCGCGA
GGAGATACTACATCCCAACGCGGATGTCGGTGAGTTCGTCGCGAAATCGA
TGAAACGCGAGCCACCCTACACCACCTGGAAAATTCGCGAAGAGGGCGAG
GAATGTCACACCATCGACTACGTCTTTTACACACCCGATCGCCTCAAGAT
CAAAAACTGTCTAGACTTTCCGGCCGGAGAGCAAATTGGCAAGAATCGCA
CACCCAGCTTCCAATATCCATCGGATCACTTTTCCCTGGTGTGTGACTTT
GAGCTACTGCCTCCGACGGAAAACGGAAAGGAAAGCGGCAGCGGAAGTGG
GAGCGATGGTGAAAATGAAACGGAAGTGGAGGGCAGCAAGCATGGATCCA
TTCAATAGAAAGCTTCAGATTCATAATTTGCCGAAAAAGAAGTTTCAATA
ACATTACATCGATTGTGATATTAGTTGTTAGATACATATTAGCCTCATAC
ACAACCGTTGCACTACAGTTTGCAGCTTTTACAAATGATAATCCAAAATT
CACAATAAATAAATTACAACGTATGGAAGAAAGTTAAAAAAAAAAAAAAA
AAA

IP15605.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:16:53
Subject Length Description Subject Range Query Range Score Percent Strand
nocturnin-RE 1924 nocturnin-RE 69..1905 1..1837 9125 99.7 Plus
nocturnin-RC 1731 nocturnin-RC 269..1712 394..1837 7160 99.7 Plus
nocturnin-RD 2221 nocturnin-RD 761..2202 396..1837 7150 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:44:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 7033132..7033764 816..1448 3165 100 Plus
chr3R 27901430 chr3R 7033828..7034216 1447..1835 1945 100 Plus
chr3R 27901430 chr3R 7030128..7030395 130..397 1340 100 Plus
chr3R 27901430 chr3R 7032485..7032721 394..630 1170 99.6 Plus
chr3R 27901430 chr3R 7026005..7026135 1..131 625 98.5 Plus
chr3R 27901430 chr3R 7032943..7033065 694..816 615 100 Plus
chr3R 27901430 chr3R 7032775..7032838 630..693 320 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:25:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:44:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11207549..11208181 816..1448 3120 99.5 Plus
3R 32079331 3R 11208245..11208635 1447..1837 1955 100 Plus
3R 32079331 3R 11204564..11204831 130..397 1340 100 Plus
3R 32079331 3R 11206902..11207138 394..630 1170 99.6 Plus
3R 32079331 3R 11200439..11200569 1..131 655 100 Plus
3R 32079331 3R 11207360..11207482 694..816 615 100 Plus
3R 32079331 3R 11207192..11207255 630..693 320 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:10:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 10948380..10949012 816..1448 3120 99.5 Plus
3R 31820162 3R 10949076..10949466 1447..1837 1955 100 Plus
3R 31820162 3R 10945395..10945662 130..397 1340 100 Plus
3R 31820162 3R 10947733..10947969 394..630 1170 99.5 Plus
3R 31820162 3R 10941270..10941400 1..131 655 100 Plus
3R 31820162 3R 10948191..10948313 694..816 615 100 Plus
3R 31820162 3R 10948023..10948086 630..693 320 100 Plus
Blast to na_te.dros performed on 2019-03-15 21:44:26 has no hits.

IP15605.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:45:13 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 7030129..7030395 131..397 100 -> Plus
chr3R 7032489..7032721 398..630 99 -> Plus
chr3R 7032776..7032838 631..693 100 -> Plus
chr3R 7032943..7033064 694..815 100 -> Plus
chr3R 7026005..7026134 1..130 98 -> Plus
chr3R 7033132..7033764 816..1448 100 -> Plus
chr3R 7033830..7034216 1449..1835 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:59:40 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
nocturnin-RE 1..1341 318..1658 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:29:06 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
cu-RE 1..1341 318..1658 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:57:08 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
cu-RE 1..1341 318..1658 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:53:58 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
nocturnin-RE 1..1341 318..1658 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:01:55 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
cu-RE 1..1341 318..1658 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:00:35 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
nocturnin-RE 24..1856 1..1833 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:29:06 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
cu-RE 24..1856 1..1833 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:57:08 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
cu-RE 31..1865 1..1835 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:53:58 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
nocturnin-RE 24..1856 1..1833 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:01:55 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
cu-RE 31..1865 1..1835 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:45:13 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11200439..11200568 1..130 100 -> Plus
3R 11204565..11204831 131..397 100 -> Plus
3R 11206906..11207138 398..630 99 -> Plus
3R 11207193..11207255 631..693 100 -> Plus
3R 11207360..11207481 694..815 100 -> Plus
3R 11207549..11208181 816..1448 99 -> Plus
3R 11208247..11208633 1449..1835 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:45:13 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11200439..11200568 1..130 100 -> Plus
3R 11204565..11204831 131..397 100 -> Plus
3R 11206906..11207138 398..630 99 -> Plus
3R 11207193..11207255 631..693 100 -> Plus
3R 11207360..11207481 694..815 100 -> Plus
3R 11207549..11208181 816..1448 99 -> Plus
3R 11208247..11208633 1449..1835 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:45:13 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11200439..11200568 1..130 100 -> Plus
3R 11204565..11204831 131..397 100 -> Plus
3R 11206906..11207138 398..630 99 -> Plus
3R 11207193..11207255 631..693 100 -> Plus
3R 11207360..11207481 694..815 100 -> Plus
3R 11207549..11208181 816..1448 99 -> Plus
3R 11208247..11208633 1449..1835 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:57:08 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7032628..7032860 398..630 99 -> Plus
arm_3R 7032915..7032977 631..693 100 -> Plus
arm_3R 7033082..7033203 694..815 100 -> Plus
arm_3R 7026161..7026290 1..130 100 -> Plus
arm_3R 7030287..7030553 131..397 100 -> Plus
arm_3R 7033271..7033903 816..1448 99 -> Plus
arm_3R 7033969..7034355 1449..1835 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:55:11 Download gff for IP15605.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10941270..10941399 1..130 100 -> Plus
3R 10945396..10945662 131..397 100 -> Plus
3R 10947737..10947969 398..630 99 -> Plus
3R 10948024..10948086 631..693 100 -> Plus
3R 10948191..10948312 694..815 100 -> Plus
3R 10948380..10949012 816..1448 99 -> Plus
3R 10949078..10949464 1449..1835 100   Plus

IP15605.hyp Sequence

Translation from 317 to 1657

> IP15605.hyp
MEFLMKTSRLIVTSKTFARRVAVPIPRMGSFNSAPKINNVDSQDDGLVLP
SGLSTPALLQHVQQLRGGGIEQPSLLTRGFLKPLLADEDVADGLRCLKLN
SVSRVCSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYL
IVQEILQNQPDVICLQEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQ
NNGPDGCAIFYKRDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGRE
FCVATTHLKARHGALLAKLRNEQGRDLIRFVKQFAGDTPLLLCGDFNAEP
VEPIYATILGCDLLRLGSAYADVKLDREEILHPNADVGEFVAKSMKREPP
YTTWKIREEGEECHTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRTPSFQY
PSDHFSLVCDFELLPPTENGKESGSGSGSDGENETEVEGSKHGSIQ*

IP15605.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:19:05
Subject Length Description Subject Range Query Range Score Percent Strand
cu-PE 446 CG31299-PE 1..446 1..446 2353 100 Plus
cu-PG 481 CG31299-PG 1..481 1..446 2301 92.5 Plus
cu-PC 449 CG31299-PC 26..449 23..446 2231 99.3 Plus
cu-PD 642 CG31299-PD 215..642 19..446 2229 98.4 Plus
cu-PF 441 CG31299-PF 1..441 1..446 2228 95.1 Plus

IP15605.pep Sequence

Translation from 317 to 1657

> IP15605.pep
MEFLMKTSRLIVTSKTFARRVAVPIPRMGSFNSAPKINNVDSQDDGLVLP
SGLSTPALLQHVQQLRGGGIEQPSLLTRGFLKPLLADEDVADGLRCLKLN
SVSRVCSAPVEGDDIRLLQWNILSQTLGQHNDGFVRCPEEALTWEHRKYL
IVQEILQNQPDVICLQEVDHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQ
NNGPDGCAIFYKRDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGRE
FCVATTHLKARHGALLAKLRNEQGRDLIRFVKQFAGDTPLLLCGDFNAEP
VEPIYATILGCDLLRLGSAYADVKLDREEILHPNADVGEFVAKSMKREPP
YTTWKIREEGEECHTIDYVFYTPDRLKIKNCLDFPAGEQIGKNRTPSFQY
PSDHFSLVCDFELLPPTENGKESGSGSGSDGENETEVEGSKHGSIQ*

IP15605.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:33
Subject Length Description Subject Range Query Range Score Percent Strand
cu-PE 446 CG31299-PE 1..446 1..446 2353 100 Plus
cu-PG 481 CG31299-PG 1..481 1..446 2301 92.5 Plus
cu-PC 449 CG31299-PC 26..449 23..446 2231 99.3 Plus
cu-PD 642 CG31299-PD 215..642 19..446 2229 98.4 Plus
cu-PF 441 CG31299-PF 1..441 1..446 2228 95.1 Plus
cu-PH 419 CG31299-PH 1..419 28..446 2223 100 Plus
CG31759-PD 564 CG31759-PD 233..560 111..412 213 27.6 Plus
CG31759-PC 564 CG31759-PC 233..560 111..412 213 27.6 Plus
angel-PA 354 CG12273-PA 62..354 109..414 209 26.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:49:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16160-PC 448 GA16160-PC 1..448 1..446 2073 86.1 Plus
Dpse\GA16160-PE 451 GA16160-PE 20..451 15..446 1946 83.4 Plus
Dpse\GA16160-PD 668 GA16160-PD 239..668 19..446 1945 83.9 Plus
Dpse\GA11525-PA 359 GA11525-PA 69..267 115..308 172 31.3 Plus