IP15931.complete Sequence
709 bp (709 high quality bases) assembled on 2006-01-13
GenBank Submission: BT024245
> IP15931.complete
GCACGAGCAAATTAAAAACGAAATTTATGTTAAAAATTCCATATAATATA
AGTTTGGACATTTCAGATAGTTATTCTTTTTGGACCAAAACTGTTATGGT
TTCAGAGTATTAAAAGTGCACTTTATCATCGCCATGGGAGCATCGACAGT
TAAGCCCTTTTCTGAAGCGGAATGCAAGGCTATCAAGAAGTTCACGAAGA
GTTACAAGAAGCATCATGCCGACCTAGACGAAGACGAGGTAAAAAGGTCA
GCAGAAAATGCCTGGGGAAAGCTTTTGCCCCATCAAAAGAAGTATTTTGA
GGTGAGACCTAAAGAAACCCCCGTAAAAAGAATGTTGCCGGCCGCCAGGA
AAAAACCTAAGAACCAGAAGAAGAAAGCAGTCCCCAAATGGCGTTATCGT
TCGAGGAAAAGACCCATGGCCAAGCCCACGCCAAATCCCAATAATCCTGC
AATGAGCACCGCGTTCATTGGATTTTTGCGCGAGTACCAAAGGAGGAACA
CCATCGTAGACGTAAAGAAAAGGCTGCAAAGAGCAGCCAAGATGTGGTCA
AAACTATCTAAAGCTCAGAAAAACAAATTTCGCACGGCGGGAGGGAGGGA
GAGCTTTCTCAAGAATTAACAACAATATGACCTGGACTTCTAAGCACTTT
TTACAAGCCGACTAAATAAATTGTATTGTATTAAGCCAACATAAAAAAAA
AAAAAAAAA
IP15931.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:22:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42355.a | 742 | CG42355.a | 58..742 | 8..692 | 3425 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:31:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 2037426..2037721 | 303..8 | 1480 | 100 | Minus |
chr3L | 24539361 | chr3L | 2037082..2037372 | 590..300 | 1440 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 2036925..2037028 | 692..589 | 505 | 99 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:26:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:31:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2037872..2038167 | 303..8 | 1480 | 100 | Minus |
3L | 28110227 | 3L | 2037528..2037818 | 590..300 | 1455 | 100 | Minus |
3L | 28110227 | 3L | 2037365..2037474 | 698..589 | 535 | 99.1 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:14:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 2037872..2038167 | 303..8 | 1480 | 100 | Minus |
3L | 28103327 | 3L | 2037528..2037818 | 590..300 | 1455 | 100 | Minus |
3L | 28103327 | 3L | 2037365..2037474 | 698..589 | 535 | 99 | Minus |
Blast to na_te.dros performed on 2019-03-15 12:31:45 has no hits.
IP15931.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:32:50 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 2036925..2037027 | 590..692 | 99 | <- | Minus |
chr3L | 2037083..2037370 | 302..589 | 99 | <- | Minus |
chr3L | 2037428..2037721 | 8..301 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:01:03 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42355-RB | 1..510 | 134..643 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:38:55 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42355-RB | 1..510 | 134..643 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:44:36 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42355-RC | 1..486 | 134..619 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:14:05 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32308-RC | 1..486 | 134..619 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:02:08 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42355-RC | 1..486 | 134..619 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:10:57 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42355-RB | 17..701 | 8..692 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:38:55 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42355-RB | 17..701 | 8..692 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:44:36 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42355-RC | 58..742 | 8..692 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:14:05 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32308-RC | 17..701 | 8..692 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:02:08 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42355-RC | 58..742 | 8..692 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:32:50 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2037874..2038167 | 8..301 | 100 | | Minus |
3L | 2037371..2037473 | 590..692 | 100 | <- | Minus |
3L | 2037529..2037816 | 302..589 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:32:50 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2037874..2038167 | 8..301 | 100 | | Minus |
3L | 2037371..2037473 | 590..692 | 100 | <- | Minus |
3L | 2037529..2037816 | 302..589 | 100 | <- | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:32:50 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2037874..2038167 | 8..301 | 100 | | Minus |
3L | 2037371..2037473 | 590..692 | 100 | <- | Minus |
3L | 2037529..2037816 | 302..589 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:44:36 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2037529..2037816 | 302..589 | 100 | <- | Minus |
arm_3L | 2037874..2038167 | 8..301 | 100 | | Minus |
arm_3L | 2037371..2037473 | 590..692 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:01:45 Download gff for
IP15931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2037529..2037816 | 302..589 | 100 | <- | Minus |
3L | 2037874..2038167 | 8..301 | 100 | | Minus |
3L | 2037371..2037473 | 590..692 | 100 | <- | Minus |
IP15931.pep Sequence
Translation from 133 to 618
> IP15931.pep
MGASTVKPFSEAECKAIKKFTKSYKKHHADLDEDEVKRSAENAWGKLLPH
QKKYFEVRPKETPVKRMLPAARKKPKNQKKKAVPKWRYRSRKRPMAKPTP
NPNNPAMSTAFIGFLREYQRRNTIVDVKKRLQRAAKMWSKLSKAQKNKFR
TAGGRESFLKN*
IP15931.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:28:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF20096-PA | 197 | GF20096-PA | 1..155 | 1..150 | 236 | 35.8 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:28:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG14537-PA | 295 | GG14537-PA | 1..149 | 1..150 | 573 | 73.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42355-PD | 161 | CG42355-PD | 1..161 | 1..161 | 849 | 100 | Plus |
CG42355-PC | 161 | CG42355-PC | 1..161 | 1..161 | 849 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:28:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM14148-PA | 219 | GM14148-PA | 1..152 | 1..152 | 622 | 85.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:28:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13416-PA | 177 | GD13416-PA | 1..152 | 1..152 | 630 | 86.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:28:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE20892-PA | 158 | GE20892-PA | 1..150 | 1..150 | 594 | 73.3 | Plus |
IP15931.hyp Sequence
Translation from 133 to 618
> IP15931.hyp
MGASTVKPFSEAECKAIKKFTKSYKKHHADLDEDEVKRSAENAWGKLLPH
QKKYFEVRPKETPVKRMLPAARKKPKNQKKKAVPKWRYRSRKRPMAKPTP
NPNNPAMSTAFIGFLREYQRRNTIVDVKKRLQRAAKMWSKLSKAQKNKFR
TAGGRESFLKN*
IP15931.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:24:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42355-PD | 161 | CG42355-PD | 1..161 | 1..161 | 849 | 100 | Plus |
CG42355-PC | 161 | CG42355-PC | 1..161 | 1..161 | 849 | 100 | Plus |