Clone IP15931 Report

Search the DGRC for IP15931

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:159
Well:31
Vector:pOT2
Associated Gene/TranscriptCG42355-RC
Protein status:IP15931.pep: gold
Sequenced Size:709

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32308 2008-04-29 Release 5.5 accounting
CG32308 2008-08-15 Release 5.9 accounting
CG42355 2008-12-18 5.12 accounting

Clone Sequence Records

IP15931.complete Sequence

709 bp (709 high quality bases) assembled on 2006-01-13

GenBank Submission: BT024245

> IP15931.complete
GCACGAGCAAATTAAAAACGAAATTTATGTTAAAAATTCCATATAATATA
AGTTTGGACATTTCAGATAGTTATTCTTTTTGGACCAAAACTGTTATGGT
TTCAGAGTATTAAAAGTGCACTTTATCATCGCCATGGGAGCATCGACAGT
TAAGCCCTTTTCTGAAGCGGAATGCAAGGCTATCAAGAAGTTCACGAAGA
GTTACAAGAAGCATCATGCCGACCTAGACGAAGACGAGGTAAAAAGGTCA
GCAGAAAATGCCTGGGGAAAGCTTTTGCCCCATCAAAAGAAGTATTTTGA
GGTGAGACCTAAAGAAACCCCCGTAAAAAGAATGTTGCCGGCCGCCAGGA
AAAAACCTAAGAACCAGAAGAAGAAAGCAGTCCCCAAATGGCGTTATCGT
TCGAGGAAAAGACCCATGGCCAAGCCCACGCCAAATCCCAATAATCCTGC
AATGAGCACCGCGTTCATTGGATTTTTGCGCGAGTACCAAAGGAGGAACA
CCATCGTAGACGTAAAGAAAAGGCTGCAAAGAGCAGCCAAGATGTGGTCA
AAACTATCTAAAGCTCAGAAAAACAAATTTCGCACGGCGGGAGGGAGGGA
GAGCTTTCTCAAGAATTAACAACAATATGACCTGGACTTCTAAGCACTTT
TTACAAGCCGACTAAATAAATTGTATTGTATTAAGCCAACATAAAAAAAA
AAAAAAAAA

IP15931.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:22:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG42355.a 742 CG42355.a 58..742 8..692 3425 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:31:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 2037426..2037721 303..8 1480 100 Minus
chr3L 24539361 chr3L 2037082..2037372 590..300 1440 99.7 Minus
chr3L 24539361 chr3L 2036925..2037028 692..589 505 99 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:26:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:31:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 2037872..2038167 303..8 1480 100 Minus
3L 28110227 3L 2037528..2037818 590..300 1455 100 Minus
3L 28110227 3L 2037365..2037474 698..589 535 99.1 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:14:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 2037872..2038167 303..8 1480 100 Minus
3L 28103327 3L 2037528..2037818 590..300 1455 100 Minus
3L 28103327 3L 2037365..2037474 698..589 535 99 Minus
Blast to na_te.dros performed on 2019-03-15 12:31:45 has no hits.

IP15931.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:32:50 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 2036925..2037027 590..692 99 <- Minus
chr3L 2037083..2037370 302..589 99 <- Minus
chr3L 2037428..2037721 8..301 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:01:03 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
CG42355-RB 1..510 134..643 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:38:55 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
CG42355-RB 1..510 134..643 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:44:36 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
CG42355-RC 1..486 134..619 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:14:05 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
CG32308-RC 1..486 134..619 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:02:08 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
CG42355-RC 1..486 134..619 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:10:57 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
CG42355-RB 17..701 8..692 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:38:55 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
CG42355-RB 17..701 8..692 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:44:36 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
CG42355-RC 58..742 8..692 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:14:05 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
CG32308-RC 17..701 8..692 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:02:08 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
CG42355-RC 58..742 8..692 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:32:50 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2037874..2038167 8..301 100   Minus
3L 2037371..2037473 590..692 100 <- Minus
3L 2037529..2037816 302..589 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:32:50 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2037874..2038167 8..301 100   Minus
3L 2037371..2037473 590..692 100 <- Minus
3L 2037529..2037816 302..589 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:32:50 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2037874..2038167 8..301 100   Minus
3L 2037371..2037473 590..692 100 <- Minus
3L 2037529..2037816 302..589 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:44:36 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 2037529..2037816 302..589 100 <- Minus
arm_3L 2037874..2038167 8..301 100   Minus
arm_3L 2037371..2037473 590..692 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:01:45 Download gff for IP15931.complete
Subject Subject Range Query Range Percent Splice Strand
3L 2037529..2037816 302..589 100 <- Minus
3L 2037874..2038167 8..301 100   Minus
3L 2037371..2037473 590..692 100 <- Minus

IP15931.pep Sequence

Translation from 133 to 618

> IP15931.pep
MGASTVKPFSEAECKAIKKFTKSYKKHHADLDEDEVKRSAENAWGKLLPH
QKKYFEVRPKETPVKRMLPAARKKPKNQKKKAVPKWRYRSRKRPMAKPTP
NPNNPAMSTAFIGFLREYQRRNTIVDVKKRLQRAAKMWSKLSKAQKNKFR
TAGGRESFLKN*

IP15931.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:28:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20096-PA 197 GF20096-PA 1..155 1..150 236 35.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:28:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14537-PA 295 GG14537-PA 1..149 1..150 573 73.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG42355-PD 161 CG42355-PD 1..161 1..161 849 100 Plus
CG42355-PC 161 CG42355-PC 1..161 1..161 849 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:28:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14148-PA 219 GM14148-PA 1..152 1..152 622 85.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:28:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13416-PA 177 GD13416-PA 1..152 1..152 630 86.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:28:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20892-PA 158 GE20892-PA 1..150 1..150 594 73.3 Plus

IP15931.hyp Sequence

Translation from 133 to 618

> IP15931.hyp
MGASTVKPFSEAECKAIKKFTKSYKKHHADLDEDEVKRSAENAWGKLLPH
QKKYFEVRPKETPVKRMLPAARKKPKNQKKKAVPKWRYRSRKRPMAKPTP
NPNNPAMSTAFIGFLREYQRRNTIVDVKKRLQRAAKMWSKLSKAQKNKFR
TAGGRESFLKN*

IP15931.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG42355-PD 161 CG42355-PD 1..161 1..161 849 100 Plus
CG42355-PC 161 CG42355-PC 1..161 1..161 849 100 Plus