IP15948.complete Sequence
861 bp (861 high quality bases) assembled on 2005-11-21
GenBank Submission: BT024246
> IP15948.complete
AAAAGTCAAACACTTTTCTCAATTGCCACGTGCCAGAACACTGAACATTC
ACCAAATTTCTCTCATTAGAGCGTTTCTCTAGGATAACCCAACCCATACA
ATGTGGATGCAATTAGGCTGTCGCGGGCTTGCAAAAAGCCCCAGGCGAAA
AGATGAAGACATTGAGCCACAATCTATTATTGCCAGTGCATACAGGCACG
AATACATATACAACACATATTTGGCTAAGAATACTTTTCAATTACCATCG
GGCACAGATAGCGTCTATCTCGCCAACCCTTCGATGAACGAGCTAATGCG
AGCTATTCAAAGTGGCTCCTCAATGGACACATTTAAGCGCGTCATAGTAT
CAATGATTGTCCCAATTCCCAGAACTTCCCAGCTGCTGGCACAGGCGAAC
TCTCCTTGCTATCAAAATTTAAGACTTACCCCAAATGTAGTGCACCGAAG
TCATTCTTTCGATCAGCCGCAAGTGGGAATGTCAGTTCAACGACTGCCGA
GAGTGCACTCGGAGGGCGATTTGTTGCAGCCCAGGAGGTCGGTTTGTGAT
GAGATGATCTCTAGAGATGCTTTGCCAGCGCGTGTGGCTCCTTCGGAAAT
GCCCACGAAGCCCCAGGAAGTGGCGACCGAGGAGCCCAGTGTCCAGTGGA
ATGCATGCTATTGGATTGGCTTGGCACACTTGCTAATGATAATTTCTTGC
ATGCGCGGACTCTTTTAAACAGGCATTCAAATATAGAACGTCTGAATACT
GCTGTGAACTCTGATGCATTAAAGAATCAAGTTTTTTACTTGTCTCACAG
CGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA
IP15948.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:25:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32806-RA | 891 | CG32806-RA | 8..811 | 1..804 | 4020 | 100 | Plus |
CG32806-RB | 387 | CG32806-RB | 116..387 | 530..801 | 1360 | 100 | Plus |
CG32806-RB | 387 | CG32806-RB | 1..121 | 25..145 | 605 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:28:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 1683590..1684278 | 115..803 | 3445 | 100 | Plus |
chrX | 22417052 | chrX | 1683426..1683539 | 1..114 | 570 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:26:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:28:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1789730..1790419 | 115..804 | 3450 | 100 | Plus |
X | 23542271 | X | 1789566..1789679 | 1..114 | 570 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:15:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 1797828..1798517 | 115..804 | 3450 | 100 | Plus |
X | 23527363 | X | 1797664..1797777 | 1..114 | 570 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 13:28:24 has no hits.
IP15948.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:29:34 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 1683426..1683539 | 1..114 | 100 | -> | Plus |
chrX | 1683590..1684278 | 115..803 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:01:04 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32806-RA | 1..618 | 101..718 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:41:55 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32806-RA | 1..618 | 101..718 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 14:15:17 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32806-RA | 1..618 | 101..718 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:27:20 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32806-RA | 1..618 | 101..718 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:13:34 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32806-RA | 1..618 | 101..718 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:19:07 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32806-RA | 1..777 | 25..801 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:41:55 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32806-RA | 1..777 | 25..801 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:15:17 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32806-RA | 1..803 | 1..803 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:27:20 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32806-RA | 1..777 | 25..801 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:13:34 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32806-RA | 1..803 | 1..803 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:29:34 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1789566..1789679 | 1..114 | 100 | -> | Plus |
X | 1789730..1790418 | 115..803 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:29:34 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1789566..1789679 | 1..114 | 100 | -> | Plus |
X | 1789730..1790418 | 115..803 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:29:34 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1789566..1789679 | 1..114 | 100 | -> | Plus |
X | 1789730..1790418 | 115..803 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:15:17 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1683599..1683712 | 1..114 | 100 | -> | Plus |
arm_X | 1683763..1684451 | 115..803 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:03:55 Download gff for
IP15948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1797828..1798516 | 115..803 | 100 | | Plus |
X | 1797664..1797777 | 1..114 | 100 | -> | Plus |
IP15948.pep Sequence
Translation from 100 to 717
> IP15948.pep
MWMQLGCRGLAKSPRRKDEDIEPQSIIASAYRHEYIYNTYLAKNTFQLPS
GTDSVYLANPSMNELMRAIQSGSSMDTFKRVIVSMIVPIPRTSQLLAQAN
SPCYQNLRLTPNVVHRSHSFDQPQVGMSVQRLPRVHSEGDLLQPRRSVCD
EMISRDALPARVAPSEMPTKPQEVATEEPSVQWNACYWIGLAHLLMIISC
MRGLF*
IP15948.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:41:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG12878-PA | 222 | GG12878-PA | 1..222 | 1..205 | 445 | 48.9 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:28:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32806-PA | 205 | CG32806-PA | 1..205 | 1..205 | 1074 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:41:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19167-PA | 81 | GM19167-PA | 14..81 | 144..205 | 274 | 76.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:41:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD24727-PA | 205 | GD24727-PA | 1..205 | 1..205 | 832 | 77.6 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:41:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16708-PA | 109 | GE16708-PA | 1..109 | 114..205 | 187 | 42.2 | Plus |
IP15948.hyp Sequence
Translation from 100 to 717
> IP15948.hyp
MWMQLGCRGLAKSPRRKDEDIEPQSIIASAYRHEYIYNTYLAKNTFQLPS
GTDSVYLANPSMNELMRAIQSGSSMDTFKRVIVSMIVPIPRTSQLLAQAN
SPCYQNLRLTPNVVHRSHSFDQPQVGMSVQRLPRVHSEGDLLQPRRSVCD
EMISRDALPARVAPSEMPTKPQEVATEEPSVQWNACYWIGLAHLLMIISC
MRGLF*
IP15948.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:24:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32806-PA | 205 | CG32806-PA | 1..205 | 1..205 | 1074 | 100 | Plus |