Clone IP15954 Report

Search the DGRC for IP15954

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:159
Well:54
Vector:pOT2
Associated Gene/TranscriptMocs1-RA
Protein status:IP15954.pep: gold
Sequenced Size:2222

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Mocs1 2008-04-29 Release 5.5 accounting
Mocs1 2008-08-15 Release 5.9 accounting
Mocs1 2008-12-18 5.12 accounting

Clone Sequence Records

IP15954.complete Sequence

2222 bp (2222 high quality bases) assembled on 2006-02-24

GenBank Submission: BT024947

> IP15954.complete
TTGGAAACGGAGAGCGCGTAATCGGCGATATCAATTCGTAGGACATAGGA
CCGCCGTCAGCATATGTAATTGCTTATCACAGTCTGACTGTCCGAAATCG
CTCCAGCGACAACAGATCCCCCAACAACTCGTGCCACCCCCCGCAAATTG
CCGGCTTACGTAAGCCAATTGTATTCGTTTTAGCTGAGAGAACATCAATC
AAAATACAAATAACAAAAAAACATGCGGCTATTGGCCAGACACGCGATTC
GATTGCTGGGTCAGGAGAATAGCGCGGGCGAGGTGGCTTCACTTTCGAGA
GGAGCAATCCGGCTGAAGGCCACAACCGGTTACCTCAATCTGGCCACGGC
AAGTGTTCAGCCATTGGAGCCGGAGAAACAGGTGCTGAGAAAGAATTCGC
CACTCACGGACTCCTTTGGCCGGCATCACACCTATTTGAGAATTTCTCTA
ACCGAACGCTGCAATCTGCGATGCGACTACTGCATGCCCGCTGAAGGCGT
TCCGCTACAGCCGAAAAACAAACTCCTGACCACCGAGGAAATCCTTCGTC
TAGCTCGAATTTTCGTGGAGCAGGGAGTGCGAAAGATCCGCTTGACCGGC
GGAGAGCCAACTGTGCGCAGGGATATCGTAGAGATAGTGGCACAAATGAA
AGCACTACCCGAACTGGAGCAAATCGGAATTACCACCAATGGCCTGGTGC
TGACACGCCTGCTGTTGCCGCTCCAGAGAGCTGGACTAGATAACCTGAAC
ATCAGTCTGGATACGCTGAAAAGGGATCGCTTTGAGAAGATCACCAGGCG
AAAAGGATGGGAGCGGGTGATAGCCGGCATTGATTTAGCTGTCCAATTGG
GCTATCGCCCCAAGGTGAACTGCGTCCTTATGCGGGATTTCAACGAGGAT
GAAATCTGTGATTTTGTTGAGTTCACCAGGAATCGTCCGGTAGATGTGCG
GTTCATAGAGTACATGCCATTCTCCGGAAACAAGTGGCATACAGAGAGGC
TCATTTCGTATAAAGATACCCTGCAAATCATTCGACAAAGGTGGCCAGAC
TTCAAGGCCCTTCCCAATGGACCTAATGACACTTCTAAAGCCTATGCAGT
TCCGGGATTTAAGGGTCAGGTCGGTTTCATCACCTCCATGACGGAACACT
TTTGTGGTACCTGCAATAGATTGCGACTCACTGCGGATGGAAACATAAAG
GTGTGCTTGTTTGGCAACAAAGAGTTCTCGTTGAGAGATGCCATGCGAGA
TGAGAGTGTTAGCGAGGAACAGTTGGTGGATCTCATTGGAGCAGCCGTCC
AGCGTAAGAAGAAACAGCATGCAGGCATGCTGAACCTGTCGCAGATGGAG
AACCGGCCCATGATACTCATTGGCGGCTAGTAGACACACCACACTCTCTC
CCCTCTCCCGTTGCAGATGCTGCGCCAAGACTCCATCATCATCTTCATCC
TTATTCGTATCACCACGCATATCATACTTCAAGGCTGCAGCTTCAGGCCC
GAAATTACAGCCAACTCACCCATGTCGATGGCCAGGGCAAGGCCCAAATG
GTGGATGTGGGCGCAAAACCTTCGACCACAAGATTAGCTCGTGCAGAGGC
CACCGTTCAGGTGGGTGAGAAACTTACCCAACTTATAGCCGACAATCAAG
TGGCCAAGGGAGATGTTCTAACCGTAGCCCAAATTGCTGGCATAATGGGC
GCTAAGCGAACCGCCGAACTGATACCCCTGTGTCACAACATCAGCTTGTC
CTCCGTGAAAGTGCAGGCCACTCTTCTGAAAACCGAACAATCTGTGCGGC
TGGAGGCAACCGTTCGCTGCTCGGGCCAAACTGGAGTCGAGATGGAGGCA
CTAACTGCAGTTTCAGTGGCCGCTTTAACTGTGTACGACATGTGCAAGGC
TGTTTCTCACGATATCTGCATCACAAATGTCCGCCTGCTAAGCAAATCCG
GCGGAAAAAGGGACTTCCAGAGGGAGGAGCCGCAAAATGGGATAGTTACA
GAAGTCGAATAAGTCGAATACCCGACTAACCGGATTAACCACGATACGGG
GAATGGAAAATAAACTACTGCTTACTTGATTTAGCCACAAATATTAAATT
AAAAGACTTATGAAGCAAGAATACATAAGTGTAAAAATGTAGATGAAATC
ACTTCCTTATAGGAAACTAATTTGACTAACATACCAATAAAATGTTTCAG
AACAAAAAAAAAAAAAAAAAAA

IP15954.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:46:29
Subject Length Description Subject Range Query Range Score Percent Strand
Mocs1.b 2286 Mocs1.b 68..2273 1..2206 11030 100 Plus
Mocs1-RB 2276 Mocs1-RB 68..2273 1..2206 11030 100 Plus
Mocs1.a 2249 Mocs1.a 11..1334 1..1324 6620 100 Plus
Mocs1.a 2249 Mocs1.a 1351..2236 1321..2206 4430 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:24:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11063360..11064242 1321..2203 4235 98.6 Plus
chr3L 24539361 chr3L 11062453..11063305 473..1325 4205 99.5 Plus
chr3L 24539361 chr3L 11061487..11061879 1..393 1965 100 Plus
chr3L 24539361 chr3L 11061943..11062024 392..473 410 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:26:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:24:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11072466..11073351 1321..2206 4430 100 Plus
3L 28110227 3L 11071559..11072411 473..1325 4265 100 Plus
3L 28110227 3L 11070593..11070985 1..393 1965 100 Plus
3L 28110227 3L 11071049..11071130 392..473 410 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:36:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11065566..11066451 1321..2206 4430 100 Plus
3L 28103327 3L 11064659..11065511 473..1325 4265 100 Plus
3L 28103327 3L 11063693..11064085 1..393 1965 100 Plus
3L 28103327 3L 11064149..11064230 392..473 410 100 Plus
Blast to na_te.dros performed on 2019-03-16 13:24:36 has no hits.

IP15954.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:25:47 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11061487..11061879 1..393 100 -> Plus
chr3L 11061945..11062023 394..472 100 -> Plus
chr3L 11062453..11063304 473..1324 99 -> Plus
chr3L 11063364..11064242 1325..2203 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:01:08 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
Mocs1-RA 1..1158 223..1380 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:15:55 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
Mocs1-RA 1..1158 223..1380 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:18:27 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
Mocs1-RA 1..1158 223..1380 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:00:23 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
Mocs1-RA 1..1158 223..1380 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:18:35 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
Mocs1-RA 1..1158 223..1380 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:14:28 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
Mocs1-RB 11..2213 1..2203 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:15:55 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
Mocs1-RB 11..2213 1..2203 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:18:27 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
Mocs1-RA 30..2232 1..2203 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:00:23 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
Mocs1-RB 11..2213 1..2203 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:18:35 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
Mocs1-RA 30..2232 1..2203 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:25:47 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11070593..11070985 1..393 100 -> Plus
3L 11071051..11071129 394..472 100 -> Plus
3L 11071559..11072410 473..1324 100 -> Plus
3L 11072470..11073348 1325..2203 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:25:47 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11070593..11070985 1..393 100 -> Plus
3L 11071051..11071129 394..472 100 -> Plus
3L 11071559..11072410 473..1324 100 -> Plus
3L 11072470..11073348 1325..2203 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:25:47 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11070593..11070985 1..393 100 -> Plus
3L 11071051..11071129 394..472 100 -> Plus
3L 11071559..11072410 473..1324 100 -> Plus
3L 11072470..11073348 1325..2203 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:18:27 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11063693..11064085 1..393 100 -> Plus
arm_3L 11064151..11064229 394..472 100 -> Plus
arm_3L 11064659..11065510 473..1324 100 -> Plus
arm_3L 11065570..11066448 1325..2203 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:35:55 Download gff for IP15954.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11063693..11064085 1..393 100 -> Plus
3L 11064151..11064229 394..472 100 -> Plus
3L 11064659..11065510 473..1324 100 -> Plus
3L 11065570..11066448 1325..2203 100   Plus

IP15954.pep Sequence

Translation from 222 to 1379

> IP15954.pep
MRLLARHAIRLLGQENSAGEVASLSRGAIRLKATTGYLNLATASVQPLEP
EKQVLRKNSPLTDSFGRHHTYLRISLTERCNLRCDYCMPAEGVPLQPKNK
LLTTEEILRLARIFVEQGVRKIRLTGGEPTVRRDIVEIVAQMKALPELEQ
IGITTNGLVLTRLLLPLQRAGLDNLNISLDTLKRDRFEKITRRKGWERVI
AGIDLAVQLGYRPKVNCVLMRDFNEDEICDFVEFTRNRPVDVRFIEYMPF
SGNKWHTERLISYKDTLQIIRQRWPDFKALPNGPNDTSKAYAVPGFKGQV
GFITSMTEHFCGTCNRLRLTADGNIKVCLFGNKEFSLRDAMRDESVSEEQ
LVDLIGAAVQRKKKQHAGMLNLSQMENRPMILIGG*

IP15954.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:12:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10488-PA 386 GF10488-PA 1..386 1..385 1699 85.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:12:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15474-PA 385 GG15474-PA 1..385 1..385 1911 95.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:12:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14930-PA 382 GH14930-PA 47..382 50..385 1569 87.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:24
Subject Length Description Subject Range Query Range Score Percent Strand
Mocs1-PA 385 CG33048-PA 1..385 1..385 1986 100 Plus
Mocs1-PC 565 CG33048-PC 1..367 1..367 1895 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:12:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11448-PA 371 GI11448-PA 45..371 59..385 1617 89 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:12:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16733-PA 333 GL16733-PA 1..294 1..302 1073 71.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:12:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17248-PA 376 GA17248-PA 1..376 1..385 1603 81.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:13:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25246-PA 385 GM25246-PA 1..385 1..385 2018 98.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:13:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14280-PA 331 GD14280-PA 3..331 57..385 1747 98.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:13:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13645-PA 384 GJ13645-PA 1..384 1..385 1672 80.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:13:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11297-PA 389 GK11297-PA 1..389 1..385 1680 81.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:13:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21783-PA 385 GE21783-PA 1..385 1..385 1914 95.6 Plus

IP15954.hyp Sequence

Translation from 222 to 1379

> IP15954.hyp
MRLLARHAIRLLGQENSAGEVASLSRGAIRLKATTGYLNLATASVQPLEP
EKQVLRKNSPLTDSFGRHHTYLRISLTERCNLRCDYCMPAEGVPLQPKNK
LLTTEEILRLARIFVEQGVRKIRLTGGEPTVRRDIVEIVAQMKALPELEQ
IGITTNGLVLTRLLLPLQRAGLDNLNISLDTLKRDRFEKITRRKGWERVI
AGIDLAVQLGYRPKVNCVLMRDFNEDEICDFVEFTRNRPVDVRFIEYMPF
SGNKWHTERLISYKDTLQIIRQRWPDFKALPNGPNDTSKAYAVPGFKGQV
GFITSMTEHFCGTCNRLRLTADGNIKVCLFGNKEFSLRDAMRDESVSEEQ
LVDLIGAAVQRKKKQHAGMLNLSQMENRPMILIGG*

IP15954.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:24:33
Subject Length Description Subject Range Query Range Score Percent Strand
Mocs1-PA 385 CG33048-PA 1..385 1..385 1986 100 Plus
Mocs1-PC 565 CG33048-PC 1..367 1..367 1895 100 Plus