IP16508.complete Sequence
622 bp assembled on 2009-02-18
GenBank Submission: BT060436.1
> IP16508.complete
TCAGTCTCAGCGAGAAGAACCCACCCATCAAGCTAGTGGAATAGTGGAGT
TTACCAGGATATACAAAGATTACCGGGATGCGTCGATCTGTTTTGCTGTT
CCTAATCTCCGCCATTGTGCTGAGCGCGGCACTTCCTTTGCCCCCAATTT
GGGAGGACTCCGAATCGGATTCCGAGTATAATGATTATAGTGAGCTATCG
AAGCAGCAGAATCTGAAGAGCAGTATCGAGAAAACTATCAGCAAGCGAGC
TACCAAGGACACTAGTAACAGCACGGAAGATGATGAGCTCACGGATGGTA
GCAATGAGAATGTTAACGATAAAATGGACAGCTCAATGGAATCGTCTTCT
ATGCTGATCATGGCATCCGAGGAAGAATCGGAGTCCGCTGTCAGAAGGCG
CAGGTCTGGTGAGAGGAACAGGAATATAGGGCTCCTGGCCACGATTTGCC
CAAATGCTGATTTCAGAGATTTGGAGAACGGTATTACCCTAGATTCTAGA
ATTGAAATAAGGGATATGTATGCGATTTGTAAAACTCTACCAGAGTCCGG
TCGTCTACAGCAATACAACCGTTCATAAATTAAATAAAAGCAAAGAAGAA
TTCTAAAAAAAAAAAAAAAAAA
IP16508.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:23:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10799-RA | 607 | CG10799-RA | 1..597 | 13..609 | 2985 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:54:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 9145235..9145838 | 1..604 | 2975 | 99.5 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:28:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:54:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13257874..13258482 | 1..609 | 3045 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:40:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 13259073..13259681 | 1..609 | 3045 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 06:54:41 has no hits.
IP16508.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:55:19 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 9145235..9145838 | 1..604 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:05:48 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10799-RA | 1..501 | 78..578 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:35:02 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10799-RA | 1..501 | 78..578 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:52:45 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10799-RA | 1..501 | 78..578 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:25:42 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10799-RA | 1..501 | 78..578 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-18 09:38:06 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10799-RA | 1..592 | 13..604 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:35:02 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10799-RA | 1..592 | 13..604 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:52:45 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10799-RA | 1..592 | 13..604 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:25:42 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10799-RA | 1..592 | 13..604 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:55:19 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13257874..13258477 | 1..604 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:55:19 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13257874..13258477 | 1..604 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:55:19 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13257874..13258477 | 1..604 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:52:45 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9145379..9145982 | 1..604 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:08:23 Download gff for
IP16508.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13259073..13259676 | 1..604 | 100 | | Plus |
IP16508.pep Sequence
Translation from 77 to 577
> IP16508.pep
MRRSVLLFLISAIVLSAALPLPPIWEDSESDSEYNDYSELSKQQNLKSSI
EKTISKRATKDTSNSTEDDELTDGSNENVNDKMDSSMESSSMLIMASEEE
SESAVRRRRSGERNRNIGLLATICPNADFRDLENGITLDSRIEIRDMYAI
CKTLPESGRLQQYNRS*
IP16508.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10799-PA | 166 | CG10799-PA | 1..166 | 1..166 | 826 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:19:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM21460-PA | 167 | GM21460-PA | 1..160 | 1..161 | 550 | 75.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:19:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD10958-PA | 174 | GD10958-PA | 1..165 | 1..159 | 559 | 80 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:19:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE12532-PA | 132 | GE12532-PA | 1..126 | 1..155 | 329 | 53.5 | Plus |
Dyak\GE12534-PA | 159 | GE12534-PA | 1..153 | 1..156 | 270 | 57.7 | Plus |
IP16508.hyp Sequence
Translation from 77 to 577
> IP16508.hyp
MRRSVLLFLISAIVLSAALPLPPIWEDSESDSEYNDYSELSKQQNLKSSI
EKTISKRATKDTSNSTEDDELTDGSNENVNDKMDSSMESSSMLIMASEEE
SESAVRRRRSGERNRNIGLLATICPNADFRDLENGITLDSRIEIRDMYAI
CKTLPESGRLQQYNRS*
IP16508.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:22:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10799-PA | 166 | CG10799-PA | 1..166 | 1..166 | 826 | 100 | Plus |