BDGP Sequence Production Resources |
Search the DGRC for IP16603
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 166 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | RpS18-RA |
Protein status: | IP16603.pep: gold |
Sequenced Size: | 1034 |
Gene | Date | Evidence |
---|---|---|
RpS18 | 2008-04-29 | Release 5.5 accounting |
RpS18 | 2008-08-15 | Release 5.9 accounting |
CG8908 | 2008-08-15 | Release 5.9 accounting |
RpS18 | 2008-12-18 | 5.12 accounting |
CG8908 | 2008-12-18 | 5.12 accounting |
1034 bp (1034 high quality bases) assembled on 2006-03-22
GenBank Submission: BT024929
> IP16603.complete TGAGGAGTAAATACGAGAATACAAACGGCAAAATGTCGCTCGTCATCCCA GAGAAGTTCCAGCACATCCTGCGTATCATGAATACGAACATCGACGGCAA GCGCAAGGTTGGCATCGCCATGACCGCCATCAAGGGAGTGGGTCGCCGCT ACTCCAACATTGTGCTGAAGAAGGCCGATGTCGATCTTACCAAGCGCGCC GGTGAGTGCACCGAGGAGGAGGTCGACAAGGTGGTGACCATCATCTCGAA CCCTCTGCAGTACAAGGTGCCCAACTGGTTCCTCAACAGGCAGAAGGACA TCATCGATGGCAAGTACTGGCAGCTGACCTCCTCCAACTTGGACTCGAAG CTGCGTGACGATCTGGAGCGTCTGAAGAAGATCCGCTCCCACCGTGGTCT GCGTCACTACTGGGGCCTCCGTGTGCGTGGCCAGCACACCAAGACCACCG GTCGTCGTGGTCGCACCGTGGGTGTGTCCAAGAAGAAGTAAGCTTAGCAG CGTTCCCTGCCGGAACGGATTTCCGATTCGACTTTAATTTTCACATCAAC CACAAAATAAAAGAAAACACGGAAGCCGGAACGTTTTAGTGCGGAGTATA CGTGAAGTTTGTTATATTTCTAATCTGTTTACGTGTTGGCGTCATCTAAA TTGTACGAATATGTCCAGTGGTGAATCGCCGGTGAAGACGCAGAGCAGCA TATGCCTGCTGTGGCTGGTCATATGCAAGACGGCCCGCTTCCAGTTCTCC AATACGCTAACCAGCGTGATCATCATTGTGGGGCCCATCGTAGTCTTCCT CGTTTATGCGGCGACGGCTTTGTTCCGAGAGCCGCAAGAGGAGACGTCGG TGAAGTACCCGCCCGTCAACATCACAACCAAAGTGCCGTACATTTACTAC TCACCTGAGAATCTAGTCTTGGCTGCTGTCATCGAGGATGTGGTTCACGA TCTGAAGGCCGTTGGCAGTAAGGCCTTTGCCAGCGCATCTGAATTGAATA AAGCGCTGATAGGAAAGGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8908.f | 5871 | CG8908.f | 299..1098 | 220..1019 | 4000 | 100 | Plus |
CG8908.g | 5991 | CG8908.g | 299..1098 | 220..1019 | 4000 | 100 | Plus |
CG8908.e | 5702 | CG8908.e | 249..1048 | 220..1019 | 4000 | 100 | Plus |
CG8908.f | 5871 | CG8908.f | 54..242 | 35..223 | 945 | 100 | Plus |
CG8908.g | 5991 | CG8908.g | 54..242 | 35..223 | 945 | 100 | Plus |
CG8908.e | 5702 | CG8908.e | 4..192 | 35..223 | 945 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 16151531..16152201 | 220..890 | 3280 | 99.3 | Plus |
chr2R | 21145070 | chr2R | 16151286..16151474 | 35..223 | 945 | 100 | Plus |
chr2R | 21145070 | chr2R | 16152263..16152393 | 888..1018 | 655 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 20264491..20265161 | 220..890 | 3355 | 100 | Plus |
2R | 25286936 | 2R | 20264246..20264434 | 35..223 | 945 | 100 | Plus |
2R | 25286936 | 2R | 20265223..20265354 | 888..1019 | 660 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 20265690..20266360 | 220..890 | 3355 | 100 | Plus |
2R | 25260384 | 2R | 20265445..20265633 | 35..223 | 945 | 100 | Plus |
2R | 25260384 | 2R | 20266422..20266553 | 888..1019 | 660 | 100 | Plus |
2R | 25260384 | 2R | 20265275..20265309 | 1..35 | 175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 16151287..16151472 | 36..221 | 100 | -> | Plus |
chr2R | 16151115..16151149 | 1..35 | 100 | -> | Plus |
chr2R | 16151533..16152198 | 222..887 | 99 | -> | Plus |
chr2R | 16152263..16152393 | 888..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS18-RA | 1..459 | 33..491 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS18-RA | 1..459 | 33..491 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS18-RB | 1..459 | 33..491 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS18-RA | 1..459 | 33..491 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS18-RB | 1..459 | 33..491 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS18-RA | 9..631 | 1..623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS18-RA | 55..677 | 1..623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS18-RB | 30..606 | 1..577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS18-RA | 9..631 | 1..623 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RpS18-RB | 30..606 | 1..577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20264076..20264110 | 1..35 | 100 | -> | Plus |
2R | 20264247..20264432 | 36..221 | 100 | -> | Plus |
2R | 20264493..20265158 | 222..887 | 100 | -> | Plus |
2R | 20265223..20265353 | 888..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20264076..20264110 | 1..35 | 100 | -> | Plus |
2R | 20264247..20264432 | 36..221 | 100 | -> | Plus |
2R | 20264493..20265158 | 222..887 | 100 | -> | Plus |
2R | 20265223..20265353 | 888..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20264076..20264110 | 1..35 | 100 | -> | Plus |
2R | 20264247..20264432 | 36..221 | 100 | -> | Plus |
2R | 20264493..20265158 | 222..887 | 100 | -> | Plus |
2R | 20265223..20265353 | 888..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 16151752..16151937 | 36..221 | 100 | -> | Plus |
arm_2R | 16151581..16151615 | 1..35 | 100 | -> | Plus |
arm_2R | 16151998..16152663 | 222..887 | 100 | -> | Plus |
arm_2R | 16152728..16152858 | 888..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 20265692..20266357 | 222..887 | 100 | -> | Plus |
2R | 20266422..20266552 | 888..1018 | 100 | Plus | |
2R | 20265275..20265309 | 1..35 | 100 | -> | Plus |
2R | 20265446..20265631 | 36..221 | 100 | -> | Plus |
Translation from 2 to 490
> IP16603.hyp RSKYENTNGKMSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRY SNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQKDI IDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTG RRGRTVGVSKKK*
Translation from 32 to 490
> IP16603.pep MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADV DLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTS SNLDSKLRDDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSK KK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\RpS18-PA | 152 | GF12254-PA | 1..152 | 1..152 | 790 | 99.3 | Plus |
Dana\GF22723-PA | 97 | GF22723-PA | 1..95 | 1..95 | 496 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\RpS18-PA | 152 | GG22020-PA | 1..152 | 1..152 | 791 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23036-PA | 162 | GH23036-PA | 12..162 | 2..152 | 773 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RpS18-PA | 152 | CG8900-PA | 1..152 | 1..152 | 789 | 100 | Plus |
RpS18-PB | 152 | CG8900-PB | 1..152 | 1..152 | 789 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21106-PA | 158 | GI21106-PA | 8..158 | 2..152 | 778 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16906-PA | 152 | GL16906-PA | 1..152 | 1..152 | 788 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21399-PA | 152 | GA21399-PA | 1..152 | 1..152 | 788 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\RpS18-PA | 152 | GM22001-PA | 1..152 | 1..152 | 791 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\RpS18-PA | 152 | GD11500-PA | 1..152 | 1..152 | 791 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\RpS18-PA | 152 | GJ20954-PA | 1..152 | 1..152 | 782 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\RpS18-PA | 152 | GK15910-PA | 1..152 | 1..152 | 779 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\RpS18-PA | 152 | GE12097-PA | 1..152 | 1..152 | 791 | 100 | Plus |