Clone IP17118 Report

Search the DGRC for IP17118

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:171
Well:18
Vector:pOT2
Associated Gene/TranscriptCG3625-RC
Protein status:IP17118.pep: gold
Sequenced Size:1463

Clone Sequence Records

IP17118.complete Sequence

1463 bp assembled on 2010-01-14

GenBank Submission: BT120126.1

> IP17118.complete
CATACGCTCAGTTGTGCCCGCGGTCAAGGGAAAATCGCAGCCGAGCACTT
CCTCCGAGCGAAGCCAAAAAGAAATCAAGAAAATACTTAGCGTGCGTGTG
CCGGGGACCTGGTGATTTGTTCAGAGTGTGGAAATCAAACGAAAGGATCT
TTGAAAAATCCACAAGATGACCAAAGTTGAGCTATACAAGTCGCGCGTCT
TTGTGACAATCATACACCTGTGTGCACTCGGCCAATTCGCCTATGGACTC
TACTACAGCTCCTTCGAGATCCAAAGGAGCTACAAACTGAAGACGAGCCT
CAATCGCCGCCTGGTTCCCGAATCGCTGCCCCAGAAAATCAAATTGCTGT
CCTACTGGTCGCTGATAATTCAGGCACTGTACTATATTGTATCGCTGGTC
AACGATTTCGTGGGCACTAATGAGCTGACACCCAAGAAACCTCCGGCGGT
TCGCAGGTTCAAGGACTGGCTGATGGCTACATTGGCCTTTCCAGTGGCTA
TCAATGTGGGCGTGACCTTCTGGACACTGTACGCTATCGACAGGGAGCTA
GTCTTCCCCAAGGTTCTGGACCCCGTGTTCCCCAGCTGGCTCAACCACGT
CCTGCACACCAACATAGTGGTTTTCATCATCCTGGAGCTGTTCATCTCGT
ACAGGTCGTACCCAAAACGAAGCCAAGGACTCGCAGGACTGGCCATTTTC
ATGGGCGCCTACCTGGTTTGGATTCACGTGGTGAAGCACTACTCGGGTGT
GTGGGTGTATCCAGTGCTCGAGGTTCTCCAGCTTCCGCAACGCATCCTGT
TTTTTGCGGCCGTCGTTGGATTCACGCTGTCACTTTACCTGCTGGGCGAG
TTCCTCAACAATACCGTCTGGGCCAAGGAAGTGAAGTTGGCCAAGCGCAA
ATCCAACTAGGAGGCTGTGACCCGTTTCTGTTCGATGTAGTTGCGTTAAT
TAGCCACAAAATACAAATAGTGATTGACAGGTCTCGATTATACATTTTGC
TCATATTGTTCGATCTTCTCAGCCAAAGAAATTTTTCATAAGTATGTAAA
ATCGTACTGCAAAGTTAACTGAAGAAGGCGTACAAAATATGTGAGAAATA
ATAAACGAAACTTGAAACATCAACTCGATAATATATTTTCCAGTAATATT
GAATTCGGAGTCTTTAATCATAATATGGAAACCCGTTTGCTAATGATATT
CATTATATTTTTATTACGCATACATTGTAACTGAAATTATAGCCGTAGTT
TCCATTGAGCGCGCGCGTCTTTCGATAAGTTTACTAGACTAACCAAAATA
CAAAAATGCCTTCTCGATTAAACTTCTCATATCAAGCACACTGATTCAAC
GCCATCTTTGAATACCACTGTTATTCAATTCTAGTACCATAATAAAGCGA
TTAAACTCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA

IP17118.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:34:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG3625.a 1552 CG3625.a 129..1540 1..1412 7060 100 Plus
CG3625-RC 1266 CG3625-RC 1..1266 146..1411 6330 100 Plus
CG3625-RA 1425 CG3625-RA 349..1397 364..1412 5245 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:16:38
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 283416..284249 1411..583 3980 99 Minus
chr2L 23010047 chr2L 290845..291069 368..144 1110 99.6 Minus
chr2L 23010047 chr2L 284784..285005 585..364 1095 99.5 Minus
chr2L 23010047 chr2L 291642..291787 146..1 730 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:30:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 283384..284213 1412..583 4150 100 Minus
2L 23513712 2L 284748..284969 585..364 1110 100 Minus
2L 23513712 2L 290809..291033 368..144 1110 99.6 Minus
2L 23513712 2L 291606..291751 146..1 730 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:51:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 283384..284213 1412..583 4150 100 Minus
2L 23513712 2L 284748..284969 585..364 1110 100 Minus
2L 23513712 2L 290809..291033 368..144 1110 99.5 Minus
2L 23513712 2L 291606..291751 146..1 730 100 Minus
Blast to na_te.dros performed 2019-03-16 12:16:36
Subject Length Description Subject Range Query Range Score Percent Strand
412 7567 412 412 7567bp 1684..1814 1018..1155 123 60.7 Plus

IP17118.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:17:22 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 290849..291067 146..364 100 <- Minus
chr2L 283416..284246 586..1411 99 <- Minus
chr2L 284784..285004 365..585 99 <- Minus
chr2L 291643..291787 1..145 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-01-14 11:57:21 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RC 1..744 167..910 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:52:34 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RC 1..744 167..910 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 14:42:44 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RC 1..744 167..910 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:41:27 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RC 1..744 167..910 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-14 11:57:20 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RC 1..1245 167..1411 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:52:33 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RC 1..1245 167..1411 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:42:44 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RC 45..1455 1..1411 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:41:27 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
CG3625-RC 45..1455 1..1411 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:17:22 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
2L 283385..284210 586..1411 100 <- Minus
2L 284748..284968 365..585 100 <- Minus
2L 290813..291031 146..364 100 <- Minus
2L 291607..291751 1..145 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:17:22 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
2L 283385..284210 586..1411 100 <- Minus
2L 284748..284968 365..585 100 <- Minus
2L 290813..291031 146..364 100 <- Minus
2L 291607..291751 1..145 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:17:22 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
2L 283385..284210 586..1411 100 <- Minus
2L 284748..284968 365..585 100 <- Minus
2L 290813..291031 146..364 100 <- Minus
2L 291607..291751 1..145 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:42:44 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 283385..284210 586..1411 100 <- Minus
arm_2L 284748..284968 365..585 100 <- Minus
arm_2L 290813..291031 146..364 100 <- Minus
arm_2L 291607..291751 1..145 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:28:45 Download gff for IP17118.complete
Subject Subject Range Query Range Percent Splice Strand
2L 283385..284210 586..1411 100 <- Minus
2L 284748..284968 365..585 100 <- Minus
2L 290813..291031 146..364 100 <- Minus
2L 291607..291751 1..145 100   Minus

IP17118.hyp Sequence

Translation from 166 to 909

> IP17118.hyp
MTKVELYKSRVFVTIIHLCALGQFAYGLYYSSFEIQRSYKLKTSLNRRLV
PESLPQKIKLLSYWSLIIQALYYIVSLVNDFVGTNELTPKKPPAVRRFKD
WLMATLAFPVAINVGVTFWTLYAIDRELVFPKVLDPVFPSWLNHVLHTNI
VVFIILELFISYRSYPKRSQGLAGLAIFMGAYLVWIHVVKHYSGVWVYPV
LEVLQLPQRILFFAAVVGFTLSLYLLGEFLNNTVWAKEVKLAKRKSN*

IP17118.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:06:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG3625-PE 247 CG3625-PE 1..247 1..247 1278 100 Plus
CG3625-PC 247 CG3625-PC 1..247 1..247 1278 100 Plus
CG3625-PB 248 CG3625-PB 19..248 14..247 998 84.2 Plus
CG3625-PA 245 CG3625-PA 25..245 15..247 967 82.1 Plus
CG11601-PC 275 CG11601-PC 43..270 15..245 546 42.9 Plus

IP17118.pep Sequence

Translation from 166 to 909

> IP17118.pep
MTKVELYKSRVFVTIIHLCALGQFAYGLYYSSFEIQRSYKLKTSLNRRLV
PESLPQKIKLLSYWSLIIQALYYIVSLVNDFVGTNELTPKKPPAVRRFKD
WLMATLAFPVAINVGVTFWTLYAIDRELVFPKVLDPVFPSWLNHVLHTNI
VVFIILELFISYRSYPKRSQGLAGLAIFMGAYLVWIHVVKHYSGVWVYPV
LEVLQLPQRILFFAAVVGFTLSLYLLGEFLNNTVWAKEVKLAKRKSN*

IP17118.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:26:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24926-PA 250 GF24926-PA 21..250 14..247 953 79.5 Plus
Dana\GF24937-PA 275 GF24937-PA 43..270 15..245 553 44.2 Plus
Dana\GF24553-PA 310 GF24553-PA 16..227 15..238 421 37.5 Plus
Dana\GF24904-PA 560 GF24904-PA 1..67 1..67 337 95.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:26:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24663-PA 248 GG24663-PA 19..248 14..247 978 82.5 Plus
Dere\GG24665-PA 275 GG24665-PA 43..270 15..245 536 42.9 Plus
Dere\GG13922-PA 236 GG13922-PA 1..233 1..247 403 35.5 Plus
Dere\GG24660-PA 67 GG24660-PA 1..67 1..67 335 98.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:26:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10220-PA 252 GH10220-PA 21..251 14..246 874 68.7 Plus
Dgri\GH11507-PA 277 GH11507-PA 43..273 15..246 487 43.6 Plus
Dgri\GH10218-PA 67 GH10218-PA 1..66 1..66 310 84.8 Plus
Dgri\GH23361-PA 129 GH23361-PA 8..129 12..148 189 30.7 Plus
Dgri\GH14847-PA 129 GH14847-PA 8..129 12..148 178 29.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG3625-PE 247 CG3625-PE 1..247 1..247 1278 100 Plus
CG3625-PC 247 CG3625-PC 1..247 1..247 1278 100 Plus
CG3625-PB 248 CG3625-PB 19..248 14..247 998 84.2 Plus
CG3625-PA 245 CG3625-PA 25..245 15..247 967 82.1 Plus
CG11601-PC 275 CG11601-PC 43..270 15..245 546 42.9 Plus
CG11601-PB 275 CG11601-PB 43..270 15..245 546 42.9 Plus
CG11601-PA 275 CG11601-PA 43..270 15..245 546 42.9 Plus
CG6149-PB 234 CG6149-PB 9..223 8..237 422 37 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:26:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15038-PA 252 GI15038-PA 21..251 14..246 897 71.2 Plus
Dmoj\GI17003-PA 275 GI17003-PA 43..270 15..245 547 42.4 Plus
Dmoj\GI13700-PA 223 GI13700-PA 7..218 15..238 277 33 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:26:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25826-PA 249 GL25826-PA 20..249 14..247 934 75.6 Plus
Dper\GL25825-PA 598 GL25825-PA 1..67 1..67 312 86.6 Plus
Dper\GL25827-PA 114 GL25827-PA 3..99 140..236 277 50.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:26:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17568-PA 249 GA17568-PA 20..249 14..247 937 76.1 Plus
Dpse\GA11092-PA 277 GA11092-PA 43..260 15..236 513 41.4 Plus
Dpse\GA19393-PA 239 GA19393-PA 11..234 7..245 410 36.8 Plus
Dpse\GA11086-PA 598 GA11086-PA 1..67 1..67 313 86.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:26:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16682-PA 245 GM16682-PA 25..245 15..247 966 81.4 Plus
Dsec\GM16683-PA 275 GM16683-PA 43..270 15..245 536 42.4 Plus
Dsec\GM13272-PA 141 GM13272-PA 19..140 14..139 436 70.6 Plus
Dsec\GM24755-PA 296 GM24755-PA 69..293 8..247 396 36.7 Plus
Dsec\GM16680-PA 80 GM16680-PA 1..66 1..66 341 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:26:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22970-PA 245 GD22970-PA 25..245 15..247 966 81.4 Plus
Dsim\GD22971-PA 275 GD22971-PA 43..270 15..245 538 42.9 Plus
Dsim\GD12806-PA 296 GD12806-PA 69..293 8..247 417 36.2 Plus
Dsim\GD22968-PA 68 GD22968-PA 1..67 1..67 342 98.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:26:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17242-PA 251 GJ17242-PA 20..251 14..247 892 69.7 Plus
Dvir\GJ24281-PA 275 GJ24281-PA 43..271 15..246 565 44.4 Plus
Dvir\GJ14040-PA 228 GJ14040-PA 16..224 15..235 411 36.7 Plus
Dvir\GJ17241-PA 620 GJ17241-PA 1..66 1..66 301 84.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:26:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14825-PA 257 GK14825-PA 26..257 14..247 937 75.2 Plus
Dwil\GK14826-PA 275 GK14826-PA 43..270 15..245 539 44.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:26:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16272-PA 248 GE16272-PA 19..248 14..247 980 82.5 Plus
Dyak\GE16283-PA 275 GE16283-PA 43..270 15..245 532 42.4 Plus
Dyak\GE20218-PA 229 GE20218-PA 1..217 1..231 364 36.6 Plus
Dyak\GE16238-PA 67 GE16238-PA 1..67 1..67 335 98.5 Plus