Clone IP17195 Report

Search the DGRC for IP17195

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:171
Well:95
Vector:pOT2
Associated Gene/Transcriptp130CAS-RD
Protein status:IP17195.pep: gold
Sequenced Size:3305

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
p130CAS 2008-04-29 Release 5.5 accounting
p130CAS 2008-08-15 Release 5.9 accounting
p130CAS 2008-12-18 5.12 accounting

Clone Sequence Records

IP17195.complete Sequence

3305 bp assembled on 2007-03-07

GenBank Submission: BT030416

> IP17195.complete
CCAGCCATGCAAACCTGGTTCACACTCGCGTCCGTAATCGTGCTTTTGTT
TGGGATGTATTCCAATGTGTAGAGATTCGATTTCTCAATGTAGGTCTGCT
TATTTTTTGGTACGCTCCTGATATGAAAAAAACTTGCGGCAGCATCAAAA
TCTAAAAGGCATCTAACCTAACAAGAGCTAACAATTAATGGAGTGTCAAA
GTGAAAACCGAGTACCAGAAAACTCAATTAGTAATGTTGCAACGTACCAT
ACTCTGCCCGAATCCCAAACCTCATCGGTTTTGGCCAAGCATCAGCAGCG
ACAGCTGAAAGAACCGCAACAGCCGCCGCAGTACGTTATAAATTCAGTGG
CAATGCACGCCAAGACGACCACGGCGAACTCCATCACGGGCGGCACACTG
CATCGGGCAAAAAGTGCGCAGAAACTTTACGCCAAGGCCATTTACGATAA
TTATGCGGACACGTCGGACGAGCTGCCCTTCAAGAAGGGTGATATTCTCA
CAGTCCTTGAGCAGGACACGGAGGGCTTCCAGGGTTGGTGGCTCTGCTCT
CTGCGCAACCGACAGGGTCTTTGCCCGGGCAACCGGTTGCGCGTCTTGAA
CTCGTACGACTCGGGATGCTTCTCTCCTTCGCCGGCCAGTTCTCCAGTTC
CGTCCCTGGCGGCCAGCACGGCCACGCTGGATAGCTCCATCTGCTCGGCG
GAGATATACGAGAACGGTTCCGTCATCAGTGCGGTATCGTCCTCAAACTC
AAATTCGGGAGGGGCTAGTAGTGGACTCGGATCGGAGTCGGTGTCTCGTG
TCTCGAGGAGATCGTGGCACGCCTCGCCGACAAAGGTAATCACACCACAG
CGACACGGTGATGTATACATCTACAATTACTCGCCAGGATCAGCGACTGG
ATCTGGAGCAAGAGCCGCGCCCAGCACGCCGCAGCAGCAGATCTATAGCA
ACCAAAGCATCTACCAGAACTTTGCAATGATGTCCAGTCCTCGCCAAAAC
GCAAGTGGCAGCGAGTTTGAGACCTATGACATACCCAAGCCGGCCACGCC
CGTTCCGCTGAACTACGACAGTCCCAGAAGCGGTCTTCCGAAGGCTTCTA
ACTCTACAACGACCTCCAGCTCCAGCCTAGGCACCCGGTTTGAGACACTC
AAGAGCGTGGCCGCATCCATTGCGGAGGAGTCTTACGATGTGCCACGACC
CCTGATCTTAGGCAGCAACCAGCTCCAGCAGCAAATGTCACAGATGACGC
CAAGCAGTTCCGCCTCCTCACTGCTGACCAGCGACAGCCTCTCCCTGAGC
TTTTCCAGCTCGAACCGTTCATCGCTGGCCAACATGCCGGATTACGACAT
CCCTCGACGAAATCCGCTTCCTGTGCGCCGTCAACAAAGTGGGCTGACCT
ACGACTTTCCGCTGCCTCCGTTGCAGGAGCAGGTTCCGCGGGTGCTGTGC
ACACCCTCTACCGTCACCACTACCAAAGAACTGCCTCTAGAGCTCTCCTC
CGCACTAGAAACACTCGCAAAGCTGCAACTGCAGACTACTGCGGCCATTA
ATCGATTGCTAAGTTTCGTAGTACCCAATTGGCGCACCCGCGCTCAACTC
GAGCCGGCCATCATGGATCTGAAGCTGGCCGCCCTGCGTCTGCGCACAAC
ACTCCACGACCTGGCAGAGTTCGGGGAGGGAGCCCTGGGAAACGCCACGC
GTTCGGAGGACCGAAACCTGGCCCTCAAGCTGCGGCCCTTGGTGCGGGCT
TTGCGAGATGCCAACAAGCTGATTCACGACTCTTCCGAATCCCTCGATGC
CCAGGGAGCCTGGTCTATAGATCAGCTGGCCAGAAGCGACGAGAAGCACG
GCTGCCGACCCCCGGACGCACTGGACCAACTGATGGTTTGTGCCCAGACG
CTCACTGAGGACGTGCGCTCAACCACCAGTTTCATACAGGGCAACGCCTC
GCTACTTTTTAAGCGGCAGCTGACGGTGGGTCACAACGGAGGATCAGGAA
CGGGAGTGTTAGAGGGCAGTCGGGGCAGCGCTGAATGGTTGGAGGACTAC
GACTATGTGGCCTTTGAGTCCAAGGATGCAGCTGCCAGGAAAAACGAGGC
GCTACGTGAGGCTATTCCCGCCGACCTGAAAACGCAGTTCGATACGGTTA
TCCGGACTGCTGAGAGTTCAGCCATGGGCGCTGGGTCTGGATCAATTCCA
ACCACGCCCACGGCACGCACGACACCTACTACGCCCTGCAAGTCGCCAGA
GATGACCGACAAAGACAAGAAGCTGGTGCGCTACTATGCCCAACAGATCT
CTACTCATATGGGAAACTTGATGCAGGCCATTGATTCCTTCCTGGAGACA
GTAGAAAAGAACCAGCCGCCCAAGTTCTTCATTGCATACGGAAAGTTTGT
GGTCGTGAGCGCCCACAACTTGGTGACCATAGGCGACAACGTTTACCGAA
ATATTTCGAAGGAGGCACTGCGGGAGAAAATCCTGCGCTGCACCAACGCC
CTCTCCGATGCCCTAAAAACGTGCGTCTTGAAGTCAAAGAAGGCGGCAGC
CCACTTCCCCAGCGGTAGTGCAGTCCAGGAAATGGTCGATTCGGTGGTCC
ACATCAACAACCTAGCCCGGGACCTCAAGTCGGTCATGCTGCAGGCAGTT
CATCTGTCAACGGCGGCAGGAGTGGGTGCATGAATGGATTTCAGACAACC
AGTATTAGTTGAGAGGCGTGTAGCCAGGTCTTCCAGCATTGTCCGCGGTT
TGGTAGATGTAGCACATGCATTGCATGTGTATCTGACATCGACATATCCT
GGCATCAGCAACCGAGCGCCAATTGCCGCTTATATTTTGCATTGTGATAT
TTTGAGCAAAACATCTGAAAATGCACAGCACCACAGCCACAATCGCCCGA
TCGCCATCCCGGCCAGAACTCAGGTTCGGGCAAGCATAAGTTACGATATT
GTACATAGGACGATGTAAATTAGCGTATTCCCAAACCCCTGTCATGTCCG
CTAGCAATATTGTATTAGTGAAGCATTTCAACATAGTTTTGTATACTTAT
ATACTCTATACTCTAGAGCATAAACTTAGCCGTACCACCACATAAACATC
TGCCTAAGTTAAGCACGCATTATTATACTTGCATAGTCAGAATCTGAAAG
ATTTACCCCCAACATTTTGAATAACGCGCCTTGGCGCTACTACAGTCAGC
GATATACAAGCATATATATATAAATTGTAAACAACCAAGAAATTAGTATG
TAATATGAACAATAAACTAAAGACTTCGAATAAAATAAAAAAAAAAAAAA
AAAAA

IP17195.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:06:35
Subject Length Description Subject Range Query Range Score Percent Strand
p130CAS-RD 3404 p130CAS-RD 45..3339 1..3295 16445 99.9 Plus
p130CAS-RA 3570 p130CAS-RA 561..3435 421..3295 14345 99.9 Plus
p130CAS-RG 3576 p130CAS-RG 567..3441 421..3295 14345 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:52:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 172021..174473 834..3286 12265 100 Plus
chr3L 24539361 chr3L 152846..153266 1..421 2090 99.8 Plus
chr3L 24539361 chr3L 168540..168815 563..838 1380 100 Plus
chr3L 24539361 chr3L 167434..167582 418..566 745 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:30:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 172059..174520 834..3295 12280 99.9 Plus
3L 28110227 3L 152884..153304 1..421 2105 100 Plus
3L 28110227 3L 168578..168853 563..838 1380 100 Plus
3L 28110227 3L 167472..167620 418..566 745 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:01:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 172059..174520 834..3295 12280 99.9 Plus
3L 28103327 3L 152884..153304 1..421 2105 100 Plus
3L 28103327 3L 168578..168853 563..838 1380 100 Plus
3L 28103327 3L 167472..167620 418..566 745 100 Plus
Blast to na_te.dros performed on 2019-03-16 07:52:13 has no hits.

IP17195.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:53:08 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 168543..168812 566..835 100 -> Plus
chr3L 172023..174473 836..3286 100   Plus
chr3L 152846..153266 1..421 99 -> Plus
chr3L 167438..167581 422..565 100 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:24:43 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
p130CAS-RD 1..2496 188..2683 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:07:34 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
p130CAS-RD 1..2496 188..2683 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:51:50 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
p130CAS-RD 1..2496 188..2683 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:17:39 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
p130CAS-RD 1..2496 188..2683 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:42:42 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
p130CAS-RD 1..2496 188..2683 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:24:43 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
p130CAS-RD 1..3286 1..3286 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:07:34 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
p130CAS-RD 1..3286 1..3286 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:51:50 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
p130CAS-RD 1..3286 1..3286 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:17:39 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
p130CAS-RD 1..3286 1..3286 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:42:42 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
p130CAS-RD 1..3286 1..3286 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:53:08 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
3L 152884..153304 1..421 100 -> Plus
3L 167476..167619 422..565 100 -> Plus
3L 168581..168850 566..835 100 -> Plus
3L 172061..174511 836..3286 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:53:08 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
3L 152884..153304 1..421 100 -> Plus
3L 167476..167619 422..565 100 -> Plus
3L 168581..168850 566..835 100 -> Plus
3L 172061..174511 836..3286 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:53:08 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
3L 152884..153304 1..421 100 -> Plus
3L 167476..167619 422..565 100 -> Plus
3L 168581..168850 566..835 100 -> Plus
3L 172061..174511 836..3286 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:51:50 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 152884..153304 1..421 100 -> Plus
arm_3L 167476..167619 422..565 100 -> Plus
arm_3L 168581..168850 566..835 100 -> Plus
arm_3L 172061..174511 836..3286 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:40:42 Download gff for IP17195.complete
Subject Subject Range Query Range Percent Splice Strand
3L 152884..153304 1..421 100 -> Plus
3L 167476..167619 422..565 100 -> Plus
3L 168581..168850 566..835 100 -> Plus
3L 172061..174511 836..3286 100   Plus

IP17195.hyp Sequence

Translation from 187 to 2682

> IP17195.hyp
MECQSENRVPENSISNVATYHTLPESQTSSVLAKHQQRQLKEPQQPPQYV
INSVAMHAKTTTANSITGGTLHRAKSAQKLYAKAIYDNYADTSDELPFKK
GDILTVLEQDTEGFQGWWLCSLRNRQGLCPGNRLRVLNSYDSGCFSPSPA
SSPVPSLAASTATLDSSICSAEIYENGSVISAVSSSNSNSGGASSGLGSE
SVSRVSRRSWHASPTKVITPQRHGDVYIYNYSPGSATGSGARAAPSTPQQ
QIYSNQSIYQNFAMMSSPRQNASGSEFETYDIPKPATPVPLNYDSPRSGL
PKASNSTTTSSSSLGTRFETLKSVAASIAEESYDVPRPLILGSNQLQQQM
SQMTPSSSASSLLTSDSLSLSFSSSNRSSLANMPDYDIPRRNPLPVRRQQ
SGLTYDFPLPPLQEQVPRVLCTPSTVTTTKELPLELSSALETLAKLQLQT
TAAINRLLSFVVPNWRTRAQLEPAIMDLKLAALRLRTTLHDLAEFGEGAL
GNATRSEDRNLALKLRPLVRALRDANKLIHDSSESLDAQGAWSIDQLARS
DEKHGCRPPDALDQLMVCAQTLTEDVRSTTSFIQGNASLLFKRQLTVGHN
GGSGTGVLEGSRGSAEWLEDYDYVAFESKDAAARKNEALREAIPADLKTQ
FDTVIRTAESSAMGAGSGSIPTTPTARTTPTTPCKSPEMTDKDKKLVRYY
AQQISTHMGNLMQAIDSFLETVEKNQPPKFFIAYGKFVVVSAHNLVTIGD
NVYRNISKEALREKILRCTNALSDALKTCVLKSKKAAAHFPSGSAVQEMV
DSVVHINNLARDLKSVMLQAVHLSTAAGVGA*

IP17195.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:34:44
Subject Length Description Subject Range Query Range Score Percent Strand
p130CAS-PD 831 CG1212-PD 1..831 1..831 4221 100 Plus
p130CAS-PG 793 CG1212-PG 41..793 79..831 3822 100 Plus
p130CAS-PF 568 CG1212-PF 1..568 264..831 2858 100 Plus
p130CAS-PB 568 CG1212-PB 1..568 264..831 2858 100 Plus
p130CAS-PE 567 CG1212-PE 1..567 265..831 2853 100 Plus

IP17195.pep Sequence

Translation from 187 to 2682

> IP17195.pep
MECQSENRVPENSISNVATYHTLPESQTSSVLAKHQQRQLKEPQQPPQYV
INSVAMHAKTTTANSITGGTLHRAKSAQKLYAKAIYDNYADTSDELPFKK
GDILTVLEQDTEGFQGWWLCSLRNRQGLCPGNRLRVLNSYDSGCFSPSPA
SSPVPSLAASTATLDSSICSAEIYENGSVISAVSSSNSNSGGASSGLGSE
SVSRVSRRSWHASPTKVITPQRHGDVYIYNYSPGSATGSGARAAPSTPQQ
QIYSNQSIYQNFAMMSSPRQNASGSEFETYDIPKPATPVPLNYDSPRSGL
PKASNSTTTSSSSLGTRFETLKSVAASIAEESYDVPRPLILGSNQLQQQM
SQMTPSSSASSLLTSDSLSLSFSSSNRSSLANMPDYDIPRRNPLPVRRQQ
SGLTYDFPLPPLQEQVPRVLCTPSTVTTTKELPLELSSALETLAKLQLQT
TAAINRLLSFVVPNWRTRAQLEPAIMDLKLAALRLRTTLHDLAEFGEGAL
GNATRSEDRNLALKLRPLVRALRDANKLIHDSSESLDAQGAWSIDQLARS
DEKHGCRPPDALDQLMVCAQTLTEDVRSTTSFIQGNASLLFKRQLTVGHN
GGSGTGVLEGSRGSAEWLEDYDYVAFESKDAAARKNEALREAIPADLKTQ
FDTVIRTAESSAMGAGSGSIPTTPTARTTPTTPCKSPEMTDKDKKLVRYY
AQQISTHMGNLMQAIDSFLETVEKNQPPKFFIAYGKFVVVSAHNLVTIGD
NVYRNISKEALREKILRCTNALSDALKTCVLKSKKAAAHFPSGSAVQEMV
DSVVHINNLARDLKSVMLQAVHLSTAAGVGA*

IP17195.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 20:09:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24884-PA 778 GF24884-PA 38..778 79..831 2767 76.3 Plus
Dana\GF24883-PA 150 GF24883-PA 17..97 1..81 207 56.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 20:09:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14695-PA 793 GG14695-PA 41..793 79..831 3416 95 Plus
Dere\GG14693-PA 129 GG14693-PA 1..81 1..81 318 90.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 20:09:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15480-PA 808 GH15480-PA 33..808 73..831 2534 72.3 Plus
Dgri\GH19649-PA 105 GH19649-PA 1..89 127..216 230 70 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:58:19
Subject Length Description Subject Range Query Range Score Percent Strand
p130CAS-PD 831 CG1212-PD 1..831 1..831 4221 100 Plus
p130CAS-PG 793 CG1212-PG 41..793 79..831 3822 100 Plus
p130CAS-PF 568 CG1212-PF 1..568 264..831 2858 100 Plus
p130CAS-PB 568 CG1212-PB 1..568 264..831 2858 100 Plus
p130CAS-PE 567 CG1212-PE 1..567 265..831 2853 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 20:09:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16757-PA 783 GI16757-PA 39..782 79..828 2594 73.5 Plus
Dmoj\GI16756-PA 124 GI16756-PA 27..121 1..78 161 46.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 20:09:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16149-PA 869 GL16149-PA 102..869 78..831 2856 78.6 Plus
Dper\GL16148-PA 154 GL16148-PA 26..131 1..80 210 52.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 20:09:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11414-PA 805 GA11414-PA 39..805 79..831 2873 78.7 Plus
Dpse\GA28400-PA 156 GA28400-PA 24..133 1..80 206 50.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 20:09:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14311-PA 804 GM14311-PA 51..804 78..831 3939 97.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 20:09:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13548-PA 804 GD13548-PA 51..804 78..831 3935 97.1 Plus
Dsim\GD13547-PA 148 GD13547-PA 1..81 1..78 298 91.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 20:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12501-PA 792 GJ12501-PA 39..792 79..831 2691 76.1 Plus
Dvir\GJ12500-PA 112 GJ12500-PA 19..98 1..79 201 58.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 20:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21042-PA 812 GK21042-PA 37..790 73..825 2736 75.1 Plus
Dwil\GK21039-PA 130 GK21039-PA 15..121 1..78 149 42.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 20:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21057-PA 790 GE21057-PA 41..790 79..831 3442 95 Plus
Dyak\GE21055-PA 121 GE21055-PA 1..112 1..119 285 66.4 Plus