IP17352.complete Sequence
865 bp assembled on 2006-11-28
GenBank Submission: BT029680
> IP17352.complete
ATCGGTAGAACATAATAGTAAAATACAAAATTCCAAAATAATAAAAAAAA
TAACCTATTAATAATGTTTCGTTCTCTATCCGTGCTGATGTTCAATACTT
CTCAAATAGAGACAAATCTCTTTGGCATGGCCGACGATGTGTACAATACC
ATTGAGATCTTCAAAGAGGCCGCCAGTTTCGAGGCCAAGATTGGTAGACC
CTATAGAATGATATCGAGCCTTATAGACTGCTTGGTCTTCATGGTGGTGG
CTCTAATGGTGGTCGGTTTCATCATGTACGATCGCATTATGCTGTTTACA
AAACTGGCTAAGATCAATCAGAGATATAACCAAGAGGTGACTGTAAAAGC
AAAAAGAATTCGAAAGCCCAAAACATCCGATTCTCTCCCAGAAGAAGATG
ATACCGAAAATGCTGTGGATCAGGCAGAAGAAGACGGTATCAGCGTGGCA
CATTCCGAATATGCAACAGATGACGATGTCGCAACCCTTCAACCCATTGA
CGATGAAGATACAATTAAAGTCGCAATGTTCGGAACTCCCAATTGGGCCT
TTAAATGGCTAGCCACTATAAGAAACGAAAGTTTCGGATCAATTTACGAT
GGGTACTTCCGTAGATTGCATCTACACGTCACACATTGTAAATCGGTTTA
GTCATTTTCTGAGTTCCACGACATACGGATTTGCGGTTGACGATTTAAAT
TGGTTATTAGGCAGATTCCAGTACCATAAATTACCTTATTATACTCGATA
TGTATATGAACATCCACATACGTTTAAATAATGAACATGACTCATTTAGT
AACGAATGCATTTAGCAATAAAGGAAAATTTACAAATTTTTACAAGTAAA
AAAAAAAAAAAAAAA
IP17352.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:11:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34292-RA | 849 | CG34292-RA | 4..849 | 4..849 | 4230 | 100 | Plus |
CG34292.a | 794 | CG34292.a | 335..794 | 390..849 | 2300 | 100 | Plus |
CG34292.a | 794 | CG34292.a | 4..336 | 4..336 | 1665 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:01:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 22885257..22886100 | 4..847 | 4130 | 99.3 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:31:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:01:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27062216..27063061 | 4..849 | 4230 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:05:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 26803047..26803892 | 4..849 | 4230 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 19:01:25 has no hits.
IP17352.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:02:15 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 22885254..22886100 | 1..847 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:07:19 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34292-RA | 1..588 | 64..651 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:17:00 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34292-RA | 1..588 | 64..651 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:31:15 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34292-RA | 1..588 | 64..651 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:27:53 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34292-RA | 1..588 | 64..651 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:59:03 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34292-RA | 1..588 | 64..651 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:45:31 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34292-RA | 1..844 | 4..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:17:00 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34292-RA | 1..844 | 4..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:31:15 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34292-RA | 1..844 | 4..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:27:54 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34292-RA | 1..844 | 4..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:59:03 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34292-RA | 1..844 | 4..847 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:02:15 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27062213..27063059 | 1..847 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:02:15 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27062213..27063059 | 1..847 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:02:15 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27062213..27063059 | 1..847 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:31:15 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22887935..22888781 | 1..847 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:47:09 Download gff for
IP17352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26803044..26803890 | 1..847 | 99 | | Plus |
IP17352.hyp Sequence
Translation from 63 to 650
> IP17352.hyp
MFRSLSVLMFNTSQIETNLFGMADDVYNTIEIFKEAASFEAKIGRPYRMI
SSLIDCLVFMVVALMVVGFIMYDRIMLFTKLAKINQRYNQEVTVKAKRIR
KPKTSDSLPEEDDTENAVDQAEEDGISVAHSEYATDDDVATLQPIDDEDT
IKVAMFGTPNWAFKWLATIRNESFGSIYDGYFRRLHLHVTHCKSV*
IP17352.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:39:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34292-PA | 195 | CG34292-PA | 1..195 | 1..195 | 1003 | 100 | Plus |
IP17352.pep Sequence
Translation from 63 to 650
> IP17352.pep
MFRSLSVLMFNTSQIETNLFGMADDVYNTIEIFKEAASFEAKIGRPYRMI
SSLIDCLVFMVVALMVVGFIMYDRIMLFTKLAKINQRYNQEVTVKAKRIR
KPKTSDSLPEEDDTENAVDQAEEDGISVAHSEYATDDDVATLQPIDDEDT
IKVAMFGTPNWAFKWLATIRNESFGSIYDGYFRRLHLHVTHCKSV*
IP17352.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:59:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF23270-PA | 186 | GF23270-PA | 1..186 | 1..183 | 360 | 45.5 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:12:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34292-PA | 195 | CG34292-PA | 1..195 | 1..195 | 1003 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 23:59:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL12958-PA | 165 | GL12958-PA | 1..152 | 8..168 | 169 | 31.9 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:59:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA22979-PA | 165 | GA22979-PA | 1..152 | 8..168 | 154 | 30.5 | Plus |