Clone IP17576 Report

Search the DGRC for IP17576

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:175
Well:76
Vector:pOT2
Associated Gene/TranscriptCG34308-RB
Protein status:IP17576.pep: gold
Sequenced Size:822

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG34308 2008-04-29 Release 5.5 accounting
CG34308 2008-08-15 Release 5.9 accounting
CG34308 2008-12-18 5.12 accounting

Clone Sequence Records

IP17576.complete Sequence

822 bp assembled on 2006-11-28

GenBank Submission: BT029722

> IP17576.complete
CGAAATCGCATAAAAAACAAAGTGACACCCCATGCCACAAATAATGAATT
CTAAGGACAAACGAAACCCAAATTATTCCGGCGGGAACAGCGGCGAGGAA
GAGGATTCCTGGATGAACAGCTATTACACCTGCCTGGTGTGCATGCAGAC
TGCTGAATCGCCGAGGGTCAGTTTTTGCGGCCACCACTTCTGCTCCCAGT
GCATATACAACTGGATTAGGAGTCAGAAATATCAGGCCAAATGCCCCTAC
TGCCAGTCCCTGATCGGTGAGAACACCCTCATCACTATCACCATGCGAAG
ACGAAGAACGTACTTTCGTGCAAATCCTTTGTGGAGCACCGCCGCCAGAT
GCGCATGAGCAAAGACTGTTTAACCGAAAACATCTTTTTGCCGGAGGCCG
GCATGTTCACACGTGGCTATATCAAATATCCGCCGGACCCTATGCCAAGG
ATCAAGCCTTTGCCGCCCCAGATGCTTCAACAGTGGTCACGTTATCCCAT
AGTGCGCATTTTCCTTACACCCTCGCTGCACCAGCGCTTCATTAACTTCG
TTATCTTTCTGTTCATGCTGGCCATGTACCTACACGCGGCAGTGACACCG
TCTTTACTATTGTGAGCCAGTGAGACGTAGCACCCAACAAATCTCCACTA
ACAAATTGTCTTTTGAATTTCGACTTGTTATTGTCTGAAATGGCATCCAA
GAACATCTAGTTTCTGTGGCCCCAGCAGTGCAGTTCTGTGAGATTTACCC
TCTTACGTAAATAAAATTTTCTTTTGTGGGCATAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA

IP17576.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:05:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG34308-RA 785 CG34308-RA 1..785 1..785 3925 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:01:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8914499..8915282 1..783 3855 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:32:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:01:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13089299..13090083 1..785 3925 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:59:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 12830130..12830914 1..785 3925 100 Plus
Blast to na_te.dros performed on 2019-03-15 17:01:10 has no hits.

IP17576.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:02:29 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8914499..8915282 1..783 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:08:29 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RA 1..327 32..358 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:05:03 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RA 1..327 32..358 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:14:04 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RA 1..327 32..358 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:08:26 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RA 1..327 32..358 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:22:52 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RB 1..216 143..358 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:30:43 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RA 1..783 1..783 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:05:03 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RA 1..783 1..783 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:14:04 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RA 1..783 1..783 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:08:27 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RA 1..783 1..783 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:22:52 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
CG34308-RB 58..840 1..783 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:02:29 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13089299..13090081 1..783 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:02:29 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13089299..13090081 1..783 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:02:29 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13089299..13090081 1..783 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:14:04 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8915021..8915803 1..783 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:38:51 Download gff for IP17576.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12830130..12830912 1..783 100   Plus

IP17576.hyp Sequence

Translation from 31 to 357

> IP17576.hyp
MPQIMNSKDKRNPNYSGGNSGEEEDSWMNSYYTCLVCMQTAESPRVSFCG
HHFCSQCIYNWIRSQKYQAKCPYCQSLIGENTLITITMRRRRTYFRANPL
WSTAARCA*

IP17576.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG34308-PB 71 CG34308-PB 1..71 38..108 398 100 Plus
CG32847-PB 164 CG32847-PB 9..97 25..105 148 33.7 Plus

IP17576.pep Sequence

Translation from 31 to 357

> IP17576.pep
MPQIMNSKDKRNPNYSGGNSGEEEDSWMNSYYTCLVCMQTAESPRVSFCG
HHFCSQCIYNWIRSQKYQAKCPYCQSLIGENTLITITMRRRRTYFRANPL
WSTAARCA*

IP17576.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:46:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17582-PA 1584 GF17582-PA 179..236 29..86 261 70.7 Plus
Dana\GF19745-PA 252 GF19745-PA 81..151 19..89 137 33.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG34308-PC 194 CG34308-PC 1..86 1..86 489 100 Plus
CG32847-PB 164 CG32847-PB 9..97 25..105 148 33.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:46:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14112-PA 251 GL14112-PA 75..154 7..89 141 31.3 Plus
Dper\GL22919-PA 280 GL22919-PA 104..183 7..89 140 31.3 Plus
Dper\GL14111-PA 280 GL14111-PA 104..183 7..89 140 31.3 Plus
Dper\GL22918-PA 241 GL22918-PA 65..144 7..89 139 31.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:46:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28677-PA 242 GA28677-PA 104..183 7..89 139 31.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:46:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25509-PA 165 GM25509-PA 8..95 23..102 140 33 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 07:46:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18601-PA 272 GJ18601-PA 104..178 14..89 136 32.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 07:46:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22409-PA 1605 GK22409-PA 162..232 19..86 231 53.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 07:46:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26249-PA 1578 GE26249-PA 143..239 9..105 312 60.8 Plus