Clone IP17602 Report

Search the DGRC for IP17602

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:176
Well:2
Vector:pOT2
Associated Gene/TranscriptCG34367-RB
Protein status:IP17602.pep: gold
Sequenced Size:1114

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG34367 2008-04-29 Release 5.5 accounting
CG34367 2008-08-15 Release 5.9 accounting
CG34367 2008-12-18 5.12 accounting

Clone Sequence Records

IP17602.complete Sequence

1114 bp assembled on 2007-01-17

GenBank Submission: BT029958

> IP17602.complete
TCTAGATCGATTGACATTAAGTATGCCATACGCATATGAATATAGAAAAA
ACTATAACCTTTTCAGATCCGAAAATGTCTGGATTGCCCACTGCCAGCAT
AACCGAGTGCACGGAGGACAGTAATACGCCAAAGCTGGCGCCGGATAAGC
CATTATTGCCGGAAGAATGCGTCTCTCCGGAGCCCAGTCGCAACCGGGAG
CACTGCGATCCGCTGGACACGTCGCTGGTGAACACCAAGCAGCGGAGATC
GCGGACGAACTTCACCCTGGACCAGCTGAACGAGCTGGAGCGACTGTTCG
AGGAGACCCACTATCCAGATGCCTTCATGCGCGAGGAACTGAGTCAGCGA
CTGGGCCTCAGCGAAGCTAGAGTGCAGGTTTGGTTTCAAAATAGAAGGGC
GAAATGTAGAAAGCACGAAAACCAAATGCACAAAGGATTCCTCGTGGGCA
GCCGGAGTCCGCCGATTGCCACTCCGCTGGAACCATGTCGTGTGGCTCCC
TACGTCAGCCTGGCCGCCCTTCGCAGCTCATCCGTTCCATCCCATCCTGC
CGCAGCGACCAGCTCGAATCCCCAGGCACCCGGTGTCTCCGGAACCAGCA
GTTCCGGCAAGGTGGTCACCGTGGACTCACCACATAATCACAATCCGGCG
ATATCGCGCTCGGCTATCAAACAGTTTTCCAGCACCGTGGCAGCAGCCGC
CGCCTTTTCCGCTTTCGATCCGGCCATTATTTCGGTGGCAGCTCATCAGT
ACGCAGCTGCTATAACTAATGGAACCGTGCCGGCTGGATTGTTTTCTGTG
CCCCAGTACTCCATAAATCTGGCCGCCTTCGCCGCCGCCCACAGCAAGAG
CTCTTCGATAGCCGATCTCCGGATGAAGGCCAAGAAGCACTCGGAATCGT
TGGGTCTGCAGGCGGACATGGTGCTCTAGTGACCACCTGGTAGTAGAACG
TAGACATGTACATTCAATCGATGGTGCGGTGGAATTGCGTCTAGCACCAA
AGTAATAAAAAGGATAGCCACATTTATTTATTTAATTAAAGTCTTACTTA
ATAAATCTAATGAATAAGAATGACTTAAAACCAATATCGACAAATAAAAA
AAAAAAAAAAAAAA

IP17602.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:07:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG34367-RB 1158 CG34367-RB 35..1133 1..1099 5495 100 Plus
CG34367-RC 1732 CG34367-RC 673..1707 65..1099 5175 100 Plus
CG34367.b 1411 CG34367.b 742..1407 434..1099 3330 100 Plus
CG34367.b 1411 CG34367.b 431..744 65..378 1570 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:12:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 10350575..10350953 379..1 1895 100 Minus
chr2L 23010047 chr2L 10346713..10347062 1095..746 1750 100 Minus
chr2L 23010047 chr2L 10347522..10347839 749..432 1590 100 Minus
chr2L 23010047 chr2L 10349581..10349644 436..373 320 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:32:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10351713..10352091 379..1 1895 100 Minus
2L 23513712 2L 10347847..10348200 1099..746 1770 100 Minus
2L 23513712 2L 10348660..10348977 749..432 1590 100 Minus
2L 23513712 2L 10350719..10350782 436..373 320 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:01:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10351713..10352091 379..1 1895 100 Minus
2L 23513712 2L 10347847..10348200 1099..746 1770 100 Minus
2L 23513712 2L 10348660..10348977 749..432 1590 100 Minus
2L 23513712 2L 10350719..10350782 436..373 320 100 Minus
Blast to na_te.dros performed 2019-03-16 09:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
Max-element 8556 Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). 1058..1114 1023..1079 114 66.7 Plus

IP17602.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:12:48 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 10350577..10350953 1..377 100   Minus
chr2L 10346713..10347058 750..1095 100 <- Minus
chr2L 10347522..10347835 436..749 100 <- Minus
chr2L 10349582..10349639 378..435 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:08:45 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
CG34367-RC 399..1263 65..929 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:09:32 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
CG34367-RB 1..894 36..929 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:58:38 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
CG34367-RB 1..894 36..929 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:19:41 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
CG34367-RC 399..1263 65..929 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:04:10 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
CG34367-RB 1..894 36..929 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:38:25 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
CG34367-RC 399..1263 65..929 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:09:32 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
CG34367-RB 1..1095 1..1095 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:58:38 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
CG34367-RB 1..1095 1..1095 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:19:41 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
CG34367-RC 399..1263 65..929 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:04:10 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
CG34367-RB 1..1095 1..1095 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:12:48 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10347851..10348196 750..1095 100 <- Minus
2L 10348660..10348973 436..749 100 <- Minus
2L 10350720..10350777 378..435 100 <- Minus
2L 10351715..10352091 1..377 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:12:48 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10347851..10348196 750..1095 100 <- Minus
2L 10348660..10348973 436..749 100 <- Minus
2L 10350720..10350777 378..435 100 <- Minus
2L 10351715..10352091 1..377 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:12:48 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10347851..10348196 750..1095 100 <- Minus
2L 10348660..10348973 436..749 100 <- Minus
2L 10350720..10350777 378..435 100 <- Minus
2L 10351715..10352091 1..377 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:58:38 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10347851..10348196 750..1095 100 <- Minus
arm_2L 10348660..10348973 436..749 100 <- Minus
arm_2L 10350720..10350777 378..435 100 <- Minus
arm_2L 10351715..10352091 1..377 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:41:56 Download gff for IP17602.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10347851..10348196 750..1095 100 <- Minus
2L 10348660..10348973 436..749 100 <- Minus
2L 10350720..10350777 378..435 100 <- Minus
2L 10351715..10352091 1..377 100   Minus

IP17602.pep Sequence

Translation from 35 to 928

> IP17602.pep
MNIEKTITFSDPKMSGLPTASITECTEDSNTPKLAPDKPLLPEECVSPEP
SRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMRE
ELSQRLGLSEARVQVWFQNRRAKCRKHENQMHKGFLVGSRSPPIATPLEP
CRVAPYVSLAALRSSSVPSHPAAATSSNPQAPGVSGTSSSGKVVTVDSPH
NHNPAISRSAIKQFSSTVAAAAAFSAFDPAIISVAAHQYAAAITNGTVPA
GLFSVPQYSINLAAFAAAHSKSSSIADLRMKAKKHSESLGLQADMVL*

IP17602.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 21:06:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14108-PA 387 GF14108-PA 106..387 13..297 1174 84 Plus
Dana\GF12058-PA 217 GF12058-PA 109..198 67..158 253 52.2 Plus
Dana\GF12736-PA 410 GF12736-PA 143..240 68..173 252 50.9 Plus
Dana\GF15246-PA 589 GF15246-PA 44..111 61..128 250 64.7 Plus
Dana\GF20646-PA 405 GF20646-PA 81..142 68..129 242 67.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 21:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23943-PA 419 GG23943-PA 134..419 11..297 1346 94.8 Plus
Dere\GG20821-PA 416 GG20821-PA 159..281 68..186 250 48.8 Plus
Dere\GG19984-PA 219 GG19984-PA 109..197 67..157 248 51.6 Plus
Dere\GG24714-PA 416 GG24714-PA 90..151 68..129 241 67.7 Plus
Dere\GG24732-PA 352 GG24732-PA 4..64 68..128 240 70.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 21:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13518-PA 253 GH13518-PA 142..247 13..115 320 61.3 Plus
Dgri\GH13519-PA 164 GH13519-PA 7..164 134..297 308 61.2 Plus
Dgri\GH19875-PA 395 GH19875-PA 149..237 68..150 250 59.6 Plus
Dgri\GH20193-PA 219 GH20193-PA 111..172 67..128 245 69.4 Plus
Dgri\GH11220-PA 376 GH11220-PA 59..130 57..129 244 60.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:09:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG34367-PB 297 CG34367-PB 1..297 1..297 1517 100 Plus
CG34367-PC 420 CG34367-PC 134..420 11..297 1468 100 Plus
CG34367-PE 223 CG34367-PE 1..171 1..179 609 71.4 Plus
hbn-PA 409 CG33152-PA 152..339 68..259 251 38.4 Plus
gsb-PA 427 CG3388-PA 184..355 68..257 245 33.8 Plus
repo-PA 612 CG31240-PA 303..388 68..155 235 58 Plus
otp-PJ 374 CG10036-PJ 100..175 53..128 234 59.2 Plus
otp-PK 416 CG10036-PK 100..175 53..128 234 59.2 Plus
otp-PC 271 CG10036-PC 5..72 61..128 233 64.7 Plus
otp-PF 313 CG10036-PF 5..72 61..128 233 64.7 Plus
oc-PE 539 CG12154-PE 59..242 65..247 233 35.6 Plus
oc-PD 542 CG12154-PD 62..245 65..247 233 35.6 Plus
oc-PG 542 CG12154-PG 62..245 65..247 233 35.6 Plus
oc-PC 542 CG12154-PC 62..245 65..247 233 35.6 Plus
oc-PF 548 CG12154-PF 68..251 65..247 233 35.6 Plus
Drgx-PF 587 CG34340-PF 44..111 61..128 232 64.7 Plus
Drgx-PE 587 CG34340-PE 44..111 61..128 232 64.7 Plus
PHDP-PA 220 CG11182-PA 110..198 67..157 230 51.6 Plus
prd-PA 590 CG6716-PA 178..348 57..210 228 37.6 Plus
prd-PB 613 CG6716-PB 201..371 57..210 228 37.6 Plus
otp-PI 367 CG10036-PI 101..168 61..128 226 61.8 Plus
otp-PE 409 CG10036-PE 101..168 61..128 226 61.8 Plus
Pph13-PA 357 CG2819-PA 1..69 60..128 225 63.8 Plus
CG11294-PB 261 CG11294-PB 23..81 68..126 224 71.2 Plus
CG11294-PA 261 CG11294-PA 23..81 68..126 224 71.2 Plus
al-PA 408 CG3935-PA 84..152 68..143 224 60.5 Plus
otp-PG 264 CG10036-PG 6..65 69..128 223 68.3 Plus
otp-PH 306 CG10036-PH 6..65 69..128 223 68.3 Plus
CG9876-PA 275 CG9876-PA 116..196 68..148 221 53.1 Plus
eyg-PC 670 CG10488-PC 347..452 68..182 218 47.8 Plus
eyg-PB 670 CG10488-PB 347..452 68..182 218 47.8 Plus
eyg-PA 670 CG10488-PA 347..452 68..182 218 47.8 Plus
Rx-PB 904 CG10052-PB 551..699 61..203 218 38.2 Plus
ey-PB 624 CG1464-PB 192..411 64..270 217 30.9 Plus
ey-PA 838 CG1464-PA 406..625 64..270 217 30.9 Plus
ey-PC 857 CG1464-PC 425..644 64..270 217 30.9 Plus
ey-PD 898 CG1464-PD 466..685 64..270 217 30.9 Plus
gsb-n-PA 449 CG2692-PA 181..247 68..134 214 59.7 Plus
unc-4-PC 588 CG6269-PC 242..303 68..129 213 67.7 Plus
unc-4-PB 588 CG6269-PB 242..303 68..129 213 67.7 Plus
CG32532-PB 354 CG32532-PB 170..244 59..133 210 54.7 Plus
CG32532-PC 358 CG32532-PC 170..244 59..133 210 54.7 Plus
toe-PA 640 CG10704-PA 345..550 32..220 210 33.2 Plus
CG32532-PD 688 CG32532-PD 500..574 59..133 210 54.7 Plus
toy-PA 543 CG11186-PA 264..386 68..225 207 35.4 Plus
OdsH-PA 382 CG6352-PA 155..218 66..129 206 60.9 Plus
Ptx1-PA 509 CG1447-PA 231..475 43..288 199 30.4 Plus
Ptx1-PC 514 CG1447-PC 236..480 43..288 199 30.4 Plus
Ptx1-PE 610 CG1447-PE 231..475 43..288 199 30.4 Plus
Vsx1-PB 837 CG4136-PB 394..560 68..226 195 35.8 Plus
Vsx1-PA 837 CG4136-PA 394..560 68..226 195 35.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 21:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18136-PA 459 GI18136-PA 171..459 10..297 716 61.2 Plus
Dmoj\GI23866-PA 623 GI23866-PA 61..128 61..128 251 64.7 Plus
Dmoj\GI19825-PA 411 GI19825-PA 163..251 68..150 250 59.6 Plus
Dmoj\GI20720-PA 216 GI20720-PA 108..183 67..144 244 57.7 Plus
Dmoj\GI21624-PA 397 GI21624-PA 71..132 68..129 243 67.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 21:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18987-PA 387 GL18987-PA 240..387 140..297 473 68.4 Plus
Dper\GL18986-PA 228 GL18986-PA 147..226 31..115 275 68.6 Plus
Dper\GL17416-PA 401 GL17416-PA 141..258 68..181 250 50 Plus
Dper\GL10922-PA 216 GL10922-PA 108..183 67..144 245 57.7 Plus
Dper\GL18665-PA 370 GL18665-PA 44..111 61..128 245 64.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 21:06:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12075-PA 155 GA12075-PA 1..155 133..297 486 67.3 Plus
Dpse\GA17327-PA 404 GA17327-PA 144..261 68..181 249 50 Plus
Dpse\GA10822-PA 216 GA10822-PA 108..183 67..144 245 57.7 Plus
Dpse\GA17785-PA 395 GA17785-PA 82..143 68..129 241 67.7 Plus
Dpse\GA15474-PA 376 GA15474-PA 4..64 68..128 240 70.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 21:06:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11743-PA 178 GM11743-PA 16..178 135..297 789 96.3 Plus
Dsec\GM11740-PA 281 GM11740-PA 134..238 11..115 560 98.1 Plus
Dsec\GM15768-PA 407 GM15768-PA 150..272 68..186 250 48.8 Plus
Dsec\GM15498-PA 220 GM15498-PA 110..199 67..158 249 51.1 Plus
Dsec\GM16736-PA 410 GM16736-PA 84..145 68..129 243 67.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 21:06:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22270-PA 176 GD22270-PA 13..176 134..297 801 97.6 Plus
Dsim\GD22269-PA 281 GD22269-PA 134..238 11..115 558 97.1 Plus
Dsim\GD25243-PA 411 GD25243-PA 154..276 68..186 250 48.8 Plus
Dsim\GD25001-PA 220 GD25001-PA 110..199 67..158 248 51.1 Plus
Dsim\GD23036-PA 355 GD23036-PA 1..69 60..128 247 63.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 21:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14888-PA 163 GJ14888-PA 6..163 134..297 301 59.9 Plus
Dvir\GJ14877-PA 265 GJ14877-PA 141..244 13..115 301 60.6 Plus
Dvir\GJ18584-PA 405 GJ18584-PA 154..251 68..173 253 51.8 Plus
Dvir\GJ17771-PA 381 GJ17771-PA 71..131 68..128 243 68.9 Plus
Dvir\GJ20457-PA 216 GJ20457-PA 108..169 67..128 241 69.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 21:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22873-PA 395 GK22873-PA 140..238 68..174 258 51.3 Plus
Dwil\GK23788-PA 375 GK23788-PA 68..129 68..129 245 67.7 Plus
Dwil\GK15860-PA 692 GK15860-PA 584..659 67..144 243 57.7 Plus
Dwil\GK21081-PA 614 GK21081-PA 209..311 68..162 240 48.5 Plus
Dwil\GK24418-PA 364 GK24418-PA 4..64 68..128 237 70.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 21:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26064-PA 420 GE26064-PA 134..420 11..297 1359 94.1 Plus
Dyak\GE13762-PA 412 GE13762-PA 155..277 68..186 250 48.8 Plus
Dyak\GE11517-PA 219 GE11517-PA 109..197 67..157 248 51.6 Plus
Dyak\GE16769-PA 410 GE16769-PA 84..145 68..129 243 67.7 Plus
Dyak\GE16946-PA 353 GE16946-PA 4..64 68..128 239 70.5 Plus

IP17602.hyp Sequence

Translation from 35 to 928

> IP17602.hyp
MNIEKTITFSDPKMSGLPTASITECTEDSNTPKLAPDKPLLPEECVSPEP
SRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMRE
ELSQRLGLSEARVQVWFQNRRAKCRKHENQMHKGFLVGSRSPPIATPLEP
CRVAPYVSLAALRSSSVPSHPAAATSSNPQAPGVSGTSSSGKVVTVDSPH
NHNPAISRSAIKQFSSTVAAAAAFSAFDPAIISVAAHQYAAAITNGTVPA
GLFSVPQYSINLAAFAAAHSKSSSIADLRMKAKKHSESLGLQADMVL*

IP17602.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:44:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG34367-PB 297 CG34367-PB 1..297 1..297 1517 100 Plus
CG34367-PC 420 CG34367-PC 134..420 11..297 1468 100 Plus
CG34367-PE 223 CG34367-PE 1..171 1..179 609 71.4 Plus
hbn-PA 409 CG33152-PA 152..339 68..259 251 38.4 Plus
gsb-PA 427 CG3388-PA 184..355 68..257 245 33.8 Plus