Clone IP17609 Report

Search the DGRC for IP17609

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:176
Well:9
Vector:pOT2
Associated Gene/TranscriptCG34165-RA
Protein status:IP17609.pep: gold
Sequenced Size:489

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG34165 2008-04-29 Release 5.5 accounting
CG34165 2008-08-15 Release 5.9 accounting
CG34165 2008-12-18 5.12 accounting

Clone Sequence Records

IP17609.complete Sequence

489 bp assembled on 2007-01-15

GenBank Submission: BT030147

> IP17609.complete
ATTGTTCGCTTGAGGAATATTTTCAATATTCAACATGAAATTCACGATAA
TCGTTTTTGTTGCGCTCCTCGCCTTTGCATCGGCCCAGTTCGGTCCGTTT
GGTCAAATTATTAGGGGTATTGAACGATTTGAAGGTGGTCTGCAACAACA
ACAGCAGCAGCAGCAAAGCGGCTTTGGCGGTGGTCAGCAGCAGCAACAGC
AGGAGGAGGGTGTCATCTTCAGAGGTCCTTTCGGCGGCGGAGTGGAGTTC
TTCCAGGAGCAACAGCAGCAGCAGCAAGGCGGTGGAGGTCAGCAGCAACA
GCAGCAGGAGAACCTATTTAACTTCTTCGGCTAAAGCTCCTTAGTGAGGG
AAACTAGACATAGACTGACCACTATCTATAGAACTCAAAAGCAAGCCATT
AACTAAAGCCATGATCGTAGAGATAAACACACGATAAATAAATATTTTTA
AAAACACACAATTATAAACCAAAAAAAAAAAAAAAAAAA

IP17609.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG34165-RA 797 CG34165-RA 159..630 1..472 2360 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:40:17
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 14712618..14713042 46..470 2125 100 Plus
chr2L 23010047 chr2L 14712482..14712527 1..46 230 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:32:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:40:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14713931..14714357 46..472 2135 100 Plus
2L 23513712 2L 14713795..14713840 1..46 230 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 14713931..14714357 46..472 2135 100 Plus
2L 23513712 2L 14713795..14713840 1..46 230 100 Plus
Blast to na_te.dros performed 2019-03-16 00:40:15
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy5 7369 gypsy5 GYPSY5 7369bp 522..563 424..464 126 81 Plus
Tc1-2 1644 Tc1-2 TC1-2 1644bp 482..517 434..469 108 77.8 Plus

IP17609.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:40:53 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 14712482..14712527 1..46 100 -> Plus
chr2L 14712619..14712713 47..141 100 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:08:51 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 1..300 35..334 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:12:52 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 1..300 35..334 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:13:51 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 1..300 35..334 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 15:23:06 has no hits.
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:08:37 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 1..300 35..334 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:41:36 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 1..300 35..334 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:12:52 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 19..488 1..470 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:13:51 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 46..515 1..470 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 15:23:06 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:08:37 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
CG34165-RA 46..515 1..470 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:40:53 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14713795..14713840 1..46 100 -> Plus
2L 14713932..14714355 47..470 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:40:53 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14713795..14713840 1..46 100 -> Plus
2L 14713932..14714355 47..470 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:40:53 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14713795..14713840 1..46 100 -> Plus
2L 14713932..14714355 47..470 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:13:51 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 14713932..14714355 47..470 100   Plus
arm_2L 14713795..14713840 1..46 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:44:18 Download gff for IP17609.complete
Subject Subject Range Query Range Percent Splice Strand
2L 14713795..14713840 1..46 100 -> Plus
2L 14713932..14714355 47..470 100   Plus

IP17609.hyp Sequence

Translation from 34 to 333

> IP17609.hyp
MKFTIIVFVALLAFASAQFGPFGQIIRGIERFEGGLQQQQQQQQSGFGGG
QQQQQQEEGVIFRGPFGGGVEFFQEQQQQQQGGGGQQQQQQENLFNFFG*

IP17609.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:44:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG34165-PB 99 CG34165-PB 1..99 1..99 514 100 Plus
CG34165-PA 99 CG34165-PA 1..99 1..99 514 100 Plus
CG31775-PB 89 CG31775-PB 1..87 1..92 183 51.5 Plus
CG31775-PA 89 CG31775-PA 1..87 1..92 183 51.5 Plus
CG42586-PB 89 CG42586-PB 1..87 1..92 183 51.5 Plus

IP17609.pep Sequence

Translation from 34 to 333

> IP17609.pep
MKFTIIVFVALLAFASAQFGPFGQIIRGIERFEGGLQQQQQQQQSGFGGG
QQQQQQEEGVIFRGPFGGGVEFFQEQQQQQQGGGGQQQQQQENLFNFFG*

IP17609.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:03:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14891-PA 97 GF14891-PA 1..97 1..99 143 76 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:03:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25125-PA 101 GG25125-PA 1..101 1..99 188 78.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:03:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG34165-PB 99 CG34165-PB 1..99 1..99 514 100 Plus
CG34165-PA 99 CG34165-PA 1..99 1..99 514 100 Plus
CG42586-PB 89 CG42586-PB 1..87 1..92 183 51.5 Plus
CG42586-PA 89 CG42586-PA 1..87 1..92 183 51.5 Plus
CG31775-PB 89 CG31775-PB 1..87 1..92 183 51.5 Plus
CG31775-PA 89 CG31775-PA 1..87 1..92 183 51.5 Plus
CG15282-PB 79 CG15282-PB 1..77 1..83 161 54.1 Plus
CG15282-PC 79 CG15282-PC 1..77 1..83 161 54.1 Plus
CG15282-PA 79 CG15282-PA 1..77 1..83 161 54.1 Plus
CG4440-PB 79 CG4440-PB 1..76 1..99 131 42.6 Plus
CG4440-PA 79 CG4440-PA 1..76 1..99 131 42.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:03:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15721-PA 98 GM15721-PA 1..98 1..99 407 97 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 23:03:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23973-PA 99 GD23973-PA 1..99 1..99 425 100 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:03:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19042-PA 99 GE19042-PA 1..99 1..99 170 88 Plus