BDGP Sequence Production Resources |
Search the DGRC for IP17710
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 177 |
Well: | 10 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5953-RC |
Protein status: | IP17710.pep: gold |
Sequenced Size: | 2555 |
Gene | Date | Evidence |
---|---|---|
CG5953 | 2008-04-29 | Release 5.5 accounting |
CG5953 | 2008-08-15 | Release 5.9 accounting |
CG5953 | 2008-12-18 | 5.12 accounting |
2555 bp assembled on 2007-03-16
GenBank Submission: BT030423
> IP17710.complete CTTTCGCGCACAGCAAACAAAAAAAAGTCTAGCTACAACAAGTGTAAATA GCGATCCCAAGCAAACAAAAAAAAAAAAAAAAAAAAAAACAAAAGCCGAA ATGCATTATCAAAACAATAATAATAATAATAATAATGTCATTAATCTGAG ATCCCCTGCAATTCCACACAGAATTTCCCCGGAATCCGTAGCAACTACAA ATTCTTCAAACATGGGCCTGAACATACCCATGTTGATAGCGAGCAGCCAG ACGCTGGACAGTTGGAATACGGCGGGTCAGTACTCGCCACCGATATCGGG ATCCGGCGGCGGTGGATCCGAGCGAGGAGGAAGTGCTGGAGGCGGCGGAG TGCCGCCACAGCAACTGCGAGTACCGCTGCCGATGAGCTATCATGGCGGA GCTGGTGGTGGAAGCAGCAGTAGTGATTTCCAGCAGAGTCCCCTGAAGAC CATGGACACCTCGGACAATGAGGATAATAACAATACCAAGGAGGATGTGG CGGCGGCAGCGGCACTGGGACAACTGGCTGCCAAGGTCGAGCTGCGATCG CCGGCGGGCGCAGGTCCTGGCGGTGGCGGTGGTTCGAGCAGTAGGGAAGC CAATGATCCAACCAGCGATCCCATCAAGCCCGACCGCACTCTAAGCGAAG CTGGCAGCAGTCCCATACCGAATACCAATATGCACGAGGCGCACAAGAAT CACCTGCTAAACAGTCCCGCCGGCGGAAGGTCAGTCACGCCGCGGCAGGC GCATGAGCAGCTGCATCACCATCCGCACACGCAACACCACCTGCAACAGC AGCAGCAACAACTGCAGCAGCAGCATCAGCAGTTGCAGCAGCAACAACTG CAACAGCATCAGCAACAGCAGCAGCTGCATCACGGCCACGAGGAATTGGA CATCAAGCAGGAGTTGGTGGACTATTTCCATGGTCAGGCGGCTGGCGGTG GTGGTGGTGGTGGTGGTGGTGTTGTTGGTCCTGCACCACCGCCACCACCC GAATCGCATCGTTCCTATAGCTCAGCGGGCGAGGAGAGTCGGCTCCAATT GGTGGACATGGCCCAGGACCTGAGAGTCGCCCAGGCGAAGGCCAATTTCG GTGCTTTCATCCTGCCACCCAGAGGCAGTGATGCCAGCACACCCGCCATG CCCTTAAATATGCGAAAACTGACCGGCGCCGGCAGTGCGGGTCATATGCT AATGAATTCGCTGCTGGGCTCCAGGGAGAGCATGTCGGATGGCGAGGAAC CCGATCCGGATAACGATGAGGCCACCGAATCGGCCGCCAGTCCGGGTCAC ATCAAGAGCAGCGTTTCCGCCCAGGCGGCCGTTGCAGCGTCTGCCTTTTA TGCCGAGTCCCTGAATCGAGATGATTGCGATTTTATTGGATCGAATGTGT CCCTCAAACTGCGGACCATGGATCGCACGCAACGAATCATTGCGGAGAAG CTAATCAGCGAGGTGTTGTACTATGGGCAATTCAACGAGCTGGAACGCTC GGCGCGGATACAGCCCAAGTGACAGTGGCGCCCCAAGAAGTGGACGGCTG CGATGGGTAACGGAAGTAGTGGGGCCGTTGGTCTGGGCATCGGTGTGGGT TTGAGCAGGATCAGGCTGGGCAGGAGCCTTCTCGCCCCGCAGCATGGCAA GTGAATTCCATTTGATGAAATAGTCGACAGAGAGTAGTAGGCAAATACAG AGAACACAGTACAACTTATTTTTAGTTTGGCCAGGATCGGGGTCACCACT TGTACAAAGCTTGGCTTGAACGGGGGCAGTGTTACTTAGCCGGAAAGAAA GTGGGAGAGAAGTGGGAGAGTGGGAATGAAAGCAGAGAAGGGCTTGGAGA AAGGTACTTATGCAACAGGGAGGGAGAGATGCCGATGCTGAAGGGTTCAA TCACGTTTTGTCATACTTCAAAAACTAGCTAATTGAAAAGATGGTCGTCA AGCAATTAGGAGTAGAACAATTATGTCATATGGTTTGAACATTCGAAATG TGCTTTTAATGCGTGCAACGTTTAAATTATTAAGACCAAAATTTATTTAG GTTTATTTATAGAAAACATTAGGCGAATGTGTATTTTGTTAGCGTGAATT AATTTATTCTGTCTGTGTAAAGTTTAGACCATCTGCCATCTCTCCCTGAG GAAAAAACACAAAAACCACAATATAGAACACAAACCAAAGTTACTTTCTA TTCTGTTCGAAGGGCTGCCTAAACAATAGTTTAGCTTGTGTGTCCACCAA CTTCAATATTAAAATACATGAAATACATAAAATACATAGATACTAGATAG GTTACAAATATGGGTCTGGGGACTGGGGATCAGCGACACACCTGAGACGT CTAACTAGCAGAATCTCAGTATTAACTATAAAATACACTTTACATAGGGA TCCAAGCATTTGCCATAGATCGTTTCCTTTGGGGCCCGATCGTCCACTTC TGGGTGTTCTTCTCTGATTGCTGGGTTCGAGCCCCTCGAGCCACAAACAA ACCAGACCTCGCCCCCTAGAGCAGAAATACAGAAATTCAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 16507894..16510200 | 2538..212 | 11155 | 98.9 | Minus |
chr2L | 23010047 | chr2L | 16518726..16518932 | 211..1 | 895 | 97.2 | Minus |
chr2R | 21145070 | chr2R | 9711149..9711263 | 877..764 | 210 | 80.9 | Minus |
chrX | 22417052 | chrX | 21198440..21198533 | 873..780 | 185 | 79.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16509104..16511446 | 2554..212 | 11700 | 100 | Minus |
2L | 23513712 | 2L | 16519970..16520177 | 211..1 | 975 | 98.6 | Minus |
2R | 25286936 | 2R | 13823840..13823954 | 877..764 | 210 | 80.9 | Minus |
X | 23542271 | X | 21333282..21333375 | 873..780 | 185 | 79.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16509104..16511446 | 2554..212 | 11700 | 99.9 | Minus |
2L | 23513712 | 2L | 16519970..16520177 | 211..1 | 985 | 98.5 | Minus |
2R | 25260384 | 2R | 13825039..13825153 | 877..764 | 220 | 80.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
accord | 7404 | accord ACCORD 7404bp | 648..780 | 8..140 | 124 | 58.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16507894..16508590 | 1838..2538 | 99 | == | Minus |
chr2L | 16508591..16509536 | 876..1820 | 95 | == | Minus |
chr2L | 16509626..16510200 | 212..786 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5953-RB | 787..2106 | 205..1522 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5953-RC | 1..1422 | 101..1522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5953-RC | 1..1422 | 101..1522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5953-RB | 787..2106 | 205..1522 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5953-RC | 1..1422 | 101..1522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5953-RB | 1461..3796 | 205..2538 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5953-RC | 1..2535 | 1..2538 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5953-RC | 1..2535 | 1..2538 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5953-RB | 1461..3796 | 205..2538 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5953-RC | 1..2535 | 1..2538 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16509120..16511446 | 212..2538 | 100 | <- | Minus |
2L | 16519970..16520177 | 1..211 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16509120..16511446 | 212..2538 | 100 | <- | Minus |
2L | 16519970..16520177 | 1..211 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16509120..16511446 | 212..2538 | 100 | <- | Minus |
2L | 16519970..16520177 | 1..211 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16519970..16520177 | 1..211 | 98 | Minus | |
arm_2L | 16509120..16511446 | 212..2538 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16509120..16511446 | 212..2538 | 100 | <- | Minus |
2L | 16519970..16520177 | 1..211 | 98 | Minus |
Translation from 0 to 1521
> IP17710.hyp FRAQQTKKSLATTSVNSDPKQTKKKKKKTKAEMHYQNNNNNNNNVINLRS PAIPHRISPESVATTNSSNMGLNIPMLIASSQTLDSWNTAGQYSPPISGS GGGGSERGGSAGGGGVPPQQLRVPLPMSYHGGAGGGSSSSDFQQSPLKTM DTSDNEDNNNTKEDVAAAAALGQLAAKVELRSPAGAGPGGGGGSSSREAN DPTSDPIKPDRTLSEAGSSPIPNTNMHEAHKNHLLNSPAGGRSVTPRQAH EQLHHHPHTQHHLQQQQQQLQQQHQQLQQQQLQQHQQQQQLHHGHEELDI KQELVDYFHGQAAGGGGGGGGGVVGPAPPPPPESHRSYSSAGEESRLQLV DMAQDLRVAQAKANFGAFILPPRGSDASTPAMPLNMRKLTGAGSAGHMLM NSLLGSRESMSDGEEPDPDNDEATESAASPGHIKSSVSAQAAVAASAFYA ESLNRDDCDFIGSNVSLKLRTMDRTQRIIAEKLISEVLYYGQFNELERSA RIQPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5953-PC | 473 | CG5953-PC | 1..473 | 33..505 | 2471 | 100 | Plus |
CG5953-PD | 701 | CG5953-PD | 266..701 | 70..505 | 2274 | 100 | Plus |
CG5953-PB | 701 | CG5953-PB | 266..701 | 70..505 | 2274 | 100 | Plus |
CG5953-PA | 701 | CG5953-PA | 266..701 | 70..505 | 2274 | 100 | Plus |
Sp1-PB | 520 | CG1343-PB | 275..486 | 64..312 | 209 | 31 | Plus |
Translation from 1 to 1521
> IP17710.pep FRAQQTKKSLATTSVNSDPKQTKKKKKKKTKAEMHYQNNNNNNNNVINLR SPAIPHRISPESVATTNSSNMGLNIPMLIASSQTLDSWNTAGQYSPPISG SGGGGSERGGSAGGGGVPPQQLRVPLPMSYHGGAGGGSSSSDFQQSPLKT MDTSDNEDNNNTKEDVAAAAALGQLAAKVELRSPAGAGPGGGGGSSSREA NDPTSDPIKPDRTLSEAGSSPIPNTNMHEAHKNHLLNSPAGGRSVTPRQA HEQLHHHPHTQHHLQQQQQQLQQQHQQLQQQQLQQHQQQQQLHHGHEELD IKQELVDYFHGQAAGGGGGGGGGVVGPAPPPPPESHRSYSSAGEESRLQL VDMAQDLRVAQAKANFGAFILPPRGSDASTPAMPLNMRKLTGAGSAGHML MNSLLGSRESMSDGEEPDPDNDEATESAASPGHIKSSVSAQAAVAASAFY AESLNRDDCDFIGSNVSLKLRTMDRTQRIIAEKLISEVLYYGQFNELERS ARIQPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15880-PA | 613 | GF15880-PA | 462..613 | 356..506 | 723 | 90.8 | Plus |
Dana\GF15880-PA | 613 | GF15880-PA | 272..461 | 71..244 | 468 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20123-PA | 726 | GG20123-PA | 285..726 | 71..506 | 1409 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH25028-PA | 740 | GH25028-PA | 279..740 | 71..506 | 985 | 56.9 | Plus |
Dgri\GH23189-PA | 463 | GH23189-PA | 1..463 | 71..506 | 980 | 57.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5953-PC | 473 | CG5953-PC | 1..473 | 34..506 | 2471 | 100 | Plus |
CG5953-PD | 701 | CG5953-PD | 266..701 | 71..506 | 2274 | 100 | Plus |
CG5953-PB | 701 | CG5953-PB | 266..701 | 71..506 | 2274 | 100 | Plus |
CG5953-PA | 701 | CG5953-PA | 266..701 | 71..506 | 2274 | 100 | Plus |
Sp1-PB | 520 | CG1343-PB | 275..486 | 65..313 | 209 | 31 | Plus |
Sp1-PD | 715 | CG1343-PD | 470..681 | 65..313 | 209 | 31 | Plus |
Sp1-PE | 720 | CG1343-PE | 475..686 | 65..313 | 209 | 31 | Plus |
Sp1-PF | 726 | CG1343-PF | 470..681 | 65..313 | 209 | 31 | Plus |
ftz-f1-PC | 803 | CG4059-PC | 31..196 | 182..323 | 184 | 30.5 | Plus |
ftz-f1-PA | 803 | CG4059-PA | 31..196 | 182..323 | 184 | 30.5 | Plus |
ftz-f1-PD | 853 | CG4059-PD | 31..196 | 182..323 | 184 | 30.5 | Plus |
CG42594-PD | 905 | CG42594-PD | 2..427 | 42..448 | 172 | 25.9 | Plus |
CG42594-PA | 905 | CG42594-PA | 2..427 | 42..448 | 172 | 25.9 | Plus |
CG42594-PC | 1039 | CG42594-PC | 2..427 | 42..448 | 172 | 25.9 | Plus |
Pdp1-PJ | 633 | CG17888-PJ | 26..311 | 120..447 | 168 | 22.8 | Plus |
Pdp1-PD | 647 | CG17888-PD | 26..311 | 120..447 | 168 | 22.8 | Plus |
sd-PQ | 625 | CG8544-PQ | 148..348 | 128..333 | 167 | 29.3 | Plus |
Neto-PB | 822 | CG44328-PB | 621..760 | 166..296 | 166 | 34.7 | Plus |
CG30389-PF | 1009 | CG30389-PF | 773..1003 | 149..434 | 166 | 25.3 | Plus |
Unr-PC | 1032 | CG7015-PC | 53..126 | 214..296 | 166 | 44.2 | Plus |
Unr-PA | 1039 | CG7015-PA | 53..126 | 214..296 | 166 | 44.2 | Plus |
Unr-PE | 1057 | CG7015-PE | 53..126 | 214..296 | 166 | 44.2 | Plus |
Unr-PD | 1057 | CG7015-PD | 53..126 | 214..296 | 166 | 44.2 | Plus |
Unr-PB | 1057 | CG7015-PB | 53..126 | 214..296 | 166 | 44.2 | Plus |
CG30389-PD | 980 | CG30389-PD | 773..913 | 149..320 | 165 | 30.8 | Plus |
CG30389-PC | 980 | CG30389-PC | 773..913 | 149..320 | 165 | 30.8 | Plus |
CG30389-PA | 980 | CG30389-PA | 773..913 | 149..320 | 165 | 30.8 | Plus |
CG30389-PE | 1037 | CG30389-PE | 830..970 | 149..320 | 165 | 30.8 | Plus |
N-PB | 2703 | CG3936-PB | 2398..2581 | 98..301 | 163 | 30.5 | Plus |
N-PA | 2703 | CG3936-PA | 2398..2581 | 98..301 | 163 | 30.5 | Plus |
Vsx1-PB | 837 | CG4136-PB | 513..675 | 195..363 | 161 | 28.1 | Plus |
Vsx1-PA | 837 | CG4136-PA | 513..675 | 195..363 | 161 | 28.1 | Plus |
Hr38-PB | 1078 | CG1864-PB | 169..343 | 148..312 | 160 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13814-PA | 690 | GI13814-PA | 276..690 | 71..506 | 1049 | 57.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18477-PA | 711 | GL18477-PA | 271..711 | 71..506 | 1022 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19255-PA | 722 | GA19255-PA | 270..722 | 71..506 | 1164 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17172-PA | 575 | GM17172-PA | 271..568 | 71..369 | 1515 | 97.7 | Plus |
Dsec\GM17174-PA | 124 | GM17174-PA | 1..124 | 383..506 | 661 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21909-PA | 291 | GD21909-PA | 115..291 | 314..506 | 880 | 90.2 | Plus |
Dsim\GD21909-PA | 291 | GD21909-PA | 1..129 | 71..199 | 655 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17452-PA | 681 | GJ17452-PA | 257..681 | 71..506 | 1090 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24319-PA | 445 | GK24319-PA | 1..445 | 71..506 | 944 | 56.8 | Plus |