Clone IP17715 Report

Search the DGRC for IP17715

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:177
Well:15
Vector:pOT2
Associated Gene/TranscriptCG15615-RB
Protein status:IP17715.pep: gold
Sequenced Size:1469

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15615 2008-04-29 Release 5.5 accounting
CG15615 2008-08-15 Release 5.9 accounting
CG15615 2008-12-18 5.12 accounting

Clone Sequence Records

IP17715.complete Sequence

1469 bp assembled on 2007-02-01

GenBank Submission: BT030159

> IP17715.complete
AAAGTGGCCAAAGTGGTGGTAACAACCCATCCCAAGTGGCTCAAAGTGAT
CAATACATATATATATATATATTCAAAAGAGACCGCCAAATAGTGCATAT
ACCGATAGTGCCTTAACTTAAGCGTTTCACCAGCTGTAATCGGGAGCCAT
GAGGATCCATCGGCATTTTGTGTTGGGTCTGCTCGGTGTGCTCTGTTTGG
CCATCGGAGGCAGTCAATCCAAGGCTGTGGTGGATCAGCAGCCTGCAGCT
TCCCAGGTGGATAGCAAAAGTGTCGCTCAGCAGAGGATCGATCTGGGATT
GGGTCTGGGCGATGACCTGATCCACGACCACCATCACGAGCACATAATCG
AACATCACGAACATCATCACGAGCACCATGACCCCGGGTACTGGAAGAAG
AAGGTCACTTGGAAGGAGGGATGGAAGAAAATTTGGAATCCGGCTAAGAA
ACAAATCTGGAATCCTTCATGGAAGAAGATCTGGAAGCCACATTGGGTGA
AAGTGCCCGGCTGGAAGGAAATACAGGTTCCAGCTTGGAAACAAATTTGG
GTTCCTCACTGGAAAGAGATTTTAGTGCCAGCCTGGAAGGATATTCAAGT
ACCCGATTACAAGCAGATCTGGACACCAGAACTAGTCAAGGTTGGCATTC
CCGGAGAAAAATATTTGGGCAAGGATCACGAAGGTTGGGAGTACACCAGC
CACGATTTGTGGAAGAAGAAAGTGGTCTGGAAATCGCACTGGAAGAAGAT
CTGGAAGCCAGCCAAGAAGCAAATCTGGGTGCCAGAGAAGAAATTGGAGT
GGAAGGAGGCATGGAAGCAGTACTGGAAGCCAGCGAAGAAGGAAATCTGG
ACCGATAAATTGGAATGGAAGGAGGCATGGAAGCAGATTTGGGTGCCCGG
CTGGAAGGAGATCTGGGTGCCTGGATGGAAAAAGATCTGGAAGCCAGTGG
TCATTTCAGAATGGTTCCCCTCGCCCGATCACCACGATCATCATCATCAT
GAGCACCATGATTGGGATCGCAAGGACACAGGTGTTACGGCCACCAGGAC
GGCAGATGGCAAAGATAAGGTGGTCTGGAAACGAGATGACACCAATGCCG
CTGGCAAGCCAACAATGCTGCAGCCAGTGGCCAGCGCCGACTTCCAGGCC
AAGTCTCTGGAGGCAGCTAAATCCCCCGTAGCAGCACCTGCCGCCTCGGT
GGCCACCACCTCGCAGTCATTCAAGTTTCCCGGCGCGTAGGAGGTCATTG
CATCACCTAAACGGTTGCATAACAGCGCCCGGTTCCAAGCTCCTTGTAAA
TAGTCGTAAACCAGTCGCTAGCTCATAAGGCCATCCATTTCCACTTCCAT
TTGCCTTGGCGCCACTTTAAATTATCTCTAGACTTTAATTACCAGTGAAT
ATAAAATAAAATATAAACAACTAAACCATAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA

IP17715.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG15615-RB 1509 CG15615-RB 34..1465 1..1432 7160 100 Plus
CG12164-RA 1581 CG12164-RA 577..665 644..732 205 82 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:15:53
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 12680306..12680873 1429..862 2810 99.6 Minus
chr2R 21145070 chr2R 12681582..12681888 478..172 1535 100 Minus
chr2R 21145070 chr2R 12683424..12683595 172..1 860 100 Minus
chr2R 21145070 chr2R 12680927..12681077 867..717 725 98.7 Minus
chr2R 21145070 chr2R 12681278..12681370 642..550 465 100 Minus
chr2R 21145070 chr2R 12681141..12681221 718..638 405 100 Minus
chr2R 21145070 chr2R 12681429..12681504 552..477 380 100 Minus
chr2R 21145070 chr2R 3199890..3200000 644..754 210 79.3 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:33:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:15:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16793116..16793686 1432..862 2855 100 Minus
2R 25286936 2R 16794395..16794701 478..172 1535 100 Minus
2R 25286936 2R 16796236..16796407 172..1 860 100 Minus
2R 25286936 2R 16793740..16793890 867..717 740 99.3 Minus
2R 25286936 2R 16794091..16794183 642..550 465 100 Minus
2R 25286936 2R 16793954..16794034 718..638 405 100 Minus
2R 25286936 2R 16794242..16794317 552..477 380 100 Minus
2R 25286936 2R 7312516..7312626 644..754 210 79.3 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:01:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 16794315..16794885 1432..862 2855 100 Minus
2R 25260384 2R 16795594..16795900 478..172 1535 100 Minus
2R 25260384 2R 16797435..16797606 172..1 860 100 Minus
2R 25260384 2R 16794939..16795089 867..717 740 99.3 Minus
2R 25260384 2R 16795290..16795382 642..550 465 100 Minus
2R 25260384 2R 16795153..16795233 718..638 405 100 Minus
2R 25260384 2R 16795441..16795516 552..477 380 100 Minus
2R 25260384 2R 7313715..7313803 644..732 205 82 Plus
Blast to na_te.dros performed on 2019-03-16 09:15:52 has no hits.

IP17715.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:16:30 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 12680932..12681075 719..862 99 <- Minus
chr2R 12681141..12681218 641..718 100 <- Minus
chr2R 12681280..12681369 551..640 100 <- Minus
chr2R 12681431..12681502 479..550 100 <- Minus
chr2R 12680306..12680872 863..1429 99 <- Minus
chr2R 12681582..12681887 173..478 100 <- Minus
chr2R 12683424..12683595 1..172 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:09:25 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
CG15615-RA 33..1101 172..1240 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:08:21 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
CG15615-RB 1..1092 149..1240 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:59:13 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
CG15615-RB 1..1092 149..1240 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:18:42 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
CG15615-RA 33..1101 172..1240 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:05:42 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
CG15615-RB 1..1092 149..1240 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:37:23 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
CG15615-RA 33..1101 172..1240 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:08:21 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
CG15615-RB 1..1429 1..1429 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:59:13 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
CG15615-RB 1..1429 1..1429 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:18:42 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
CG15615-RA 33..1101 172..1240 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:05:42 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
CG15615-RB 1..1429 1..1429 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:16:30 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16793119..16793685 863..1429 100 <- Minus
2R 16793745..16793888 719..862 100 <- Minus
2R 16793954..16794031 641..718 100 <- Minus
2R 16794093..16794182 551..640 100 <- Minus
2R 16794244..16794315 479..550 100 <- Minus
2R 16794395..16794700 173..478 100 <- Minus
2R 16796236..16796407 1..172 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:16:30 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16793119..16793685 863..1429 100 <- Minus
2R 16793745..16793888 719..862 100 <- Minus
2R 16793954..16794031 641..718 100 <- Minus
2R 16794093..16794182 551..640 100 <- Minus
2R 16794244..16794315 479..550 100 <- Minus
2R 16794395..16794700 173..478 100 <- Minus
2R 16796236..16796407 1..172 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:16:30 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16793119..16793685 863..1429 100 <- Minus
2R 16793745..16793888 719..862 100 <- Minus
2R 16793954..16794031 641..718 100 <- Minus
2R 16794093..16794182 551..640 100 <- Minus
2R 16794244..16794315 479..550 100 <- Minus
2R 16794395..16794700 173..478 100 <- Minus
2R 16796236..16796407 1..172 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:59:13 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12683741..12683912 1..172 100   Minus
arm_2R 12681749..12681820 479..550 100 <- Minus
arm_2R 12681900..12682205 173..478 100 <- Minus
arm_2R 12680624..12681190 863..1429 100 <- Minus
arm_2R 12681250..12681393 719..862 100 <- Minus
arm_2R 12681459..12681536 641..718 100 <- Minus
arm_2R 12681598..12681687 551..640 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:41:16 Download gff for IP17715.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16794944..16795087 719..862 100 <- Minus
2R 16795153..16795230 641..718 100 <- Minus
2R 16795292..16795381 551..640 100 <- Minus
2R 16795443..16795514 479..550 100 <- Minus
2R 16794318..16794884 863..1429 100 <- Minus
2R 16795594..16795899 173..478 100 <- Minus
2R 16797435..16797606 1..172 100   Minus

IP17715.pep Sequence

Translation from 148 to 1239

> IP17715.pep
MRIHRHFVLGLLGVLCLAIGGSQSKAVVDQQPAASQVDSKSVAQQRIDLG
LGLGDDLIHDHHHEHIIEHHEHHHEHHDPGYWKKKVTWKEGWKKIWNPAK
KQIWNPSWKKIWKPHWVKVPGWKEIQVPAWKQIWVPHWKEILVPAWKDIQ
VPDYKQIWTPELVKVGIPGEKYLGKDHEGWEYTSHDLWKKKVVWKSHWKK
IWKPAKKQIWVPEKKLEWKEAWKQYWKPAKKEIWTDKLEWKEAWKQIWVP
GWKEIWVPGWKKIWKPVVISEWFPSPDHHDHHHHEHHDWDRKDTGVTATR
TADGKDKVVWKRDDTNAAGKPTMLQPVASADFQAKSLEAAKSPVAAPAAS
VATTSQSFKFPGA*

IP17715.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 20:56:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13445-PA 354 GF13445-PA 13..354 9..363 1413 89.3 Plus
Dana\GF12706-PA 329 GF12706-PA 21..326 74..279 416 40.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 20:56:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22241-PA 366 GG22241-PA 12..366 9..363 1713 97.2 Plus
Dere\GG23272-PA 329 GG23272-PA 21..326 74..279 411 40.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 20:56:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21530-PA 354 GH21530-PA 1..354 1..363 1260 80.5 Plus
Dgri\GH21529-PA 330 GH21529-PA 21..327 74..281 401 40.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:28:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG15615-PB 363 CG15615-PB 1..363 1..363 2104 100 Plus
CG12164-PB 329 CG12164-PB 21..326 74..279 630 40.5 Plus
CG12164-PA 329 CG12164-PA 21..326 74..279 630 40.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 20:56:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19502-PA 359 GI19502-PA 1..359 1..363 1294 81.6 Plus
Dmoj\GI19500-PA 329 GI19500-PA 21..326 74..279 407 40.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 20:56:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16731-PA 368 GL16731-PA 1..368 1..363 1097 72.1 Plus
Dper\GL11161-PA 329 GL11161-PA 23..326 76..279 403 40.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 20:56:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13849-PA 1102 GA13849-PA 838..1102 111..363 1026 84.5 Plus
Dpse\GA11448-PA 329 GA11448-PA 23..326 76..279 403 40.5 Plus
Dpse\GA13849-PA 1102 GA13849-PA 908..990 73..141 151 48.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 20:56:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20030-PA 363 GM20030-PA 1..363 1..363 1792 98.6 Plus
Dsec\GM20945-PA 329 GM20945-PA 21..326 74..279 415 40.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 20:56:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25514-PA 361 GD25514-PA 12..361 9..363 1721 98 Plus
Dsim\GD15340-PA 329 GD15340-PA 21..326 74..279 413 40.5 Plus
Dsim\GD15342-PA 177 GD15342-PA 7..174 162..279 267 44 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 20:56:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21071-PA 445 GJ21071-PA 187..445 100..363 1045 86.9 Plus
Dvir\GJ21071-PA 445 GJ21071-PA 21..188 74..292 176 34.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 20:56:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21802-PA 346 GK21802-PA 1..346 1..363 1191 77.4 Plus
Dwil\GK21800-PA 333 GK21800-PA 23..333 76..290 427 41.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 20:56:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14034-PA 361 GE14034-PA 1..361 1..363 1720 95.9 Plus
Dyak\GE19120-PA 329 GE19120-PA 21..326 74..279 411 40.8 Plus

IP17715.hyp Sequence

Translation from 148 to 1239

> IP17715.hyp
MRIHRHFVLGLLGVLCLAIGGSQSKAVVDQQPAASQVDSKSVAQQRIDLG
LGLGDDLIHDHHHEHIIEHHEHHHEHHDPGYWKKKVTWKEGWKKIWNPAK
KQIWNPSWKKIWKPHWVKVPGWKEIQVPAWKQIWVPHWKEILVPAWKDIQ
VPDYKQIWTPELVKVGIPGEKYLGKDHEGWEYTSHDLWKKKVVWKSHWKK
IWKPAKKQIWVPEKKLEWKEAWKQYWKPAKKEIWTDKLEWKEAWKQIWVP
GWKEIWVPGWKKIWKPVVISEWFPSPDHHDHHHHEHHDWDRKDTGVTATR
TADGKDKVVWKRDDTNAAGKPTMLQPVASADFQAKSLEAAKSPVAAPAAS
VATTSQSFKFPGA*

IP17715.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:45:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG15615-PB 363 CG15615-PB 1..363 1..363 2104 100 Plus
CG12164-PB 329 CG12164-PB 21..326 74..279 630 40.5 Plus
CG12164-PA 329 CG12164-PA 21..326 74..279 630 40.5 Plus