Clone IP17766 Report

Search the DGRC for IP17766

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:177
Well:66
Vector:pOT2
Associated Gene/TranscriptCG4266-RC
Protein status:IP17766.pep: gold
Sequenced Size:1728

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4266 2008-04-29 Release 5.5 accounting
CG4266 2008-04-29 Picked prior to 5.5
CG4266 2008-08-15 Release 5.9 accounting
CG4266 2008-12-18 5.12 accounting

Clone Sequence Records

IP17766.complete Sequence

1728 bp assembled on 2007-01-25

GenBank Submission: BT030168

> IP17766.complete
CAACGCTTCAGGCTTTAGGGCAGCCATTTTTTTCACGCTTTGTAAAAAGT
TTTTTTAAAAGCCGTGGAAACCGCAGAAAGGTCGAGAAAATTGTTTTTCG
CCAGTTTTAAACGATTGTGTTGACCAACCAAAGTATGCAAAACTAAATAT
TGTGTGTGCGTGCCGTGAGTGAACCAAGCAATTGAACATGGAAACCGTGG
TTGCCTTCAACAATGAGCTCTCCGGACTCTATGACAGCCGACCGCCCATT
TCCAAAGCGAAGATGGCCGCCATCACCAAGTCGGCGATGCGGGCCATCAA
GCTGTATAAGCACGTCGTCCAGAGTGTGGAGAAGTTCATCTTGAAGTGCA
AGCCGGAGTACAAAGTACCCGGGCTGTATGTAATCGACTCGATAGTGCGC
CAGTCGCGCCACCAGTACGGTATGGACAAGGATCTGTTCGCGCCCCGATT
CCAGCGTAATCTCACGGAGACCTTTGCCAACTTGTTCCGGTGCGCTCCGG
AGGACAAGAGTCGCATCATCCGGGTACTGAACCTGTGGCAGAAAAACAAC
GTCTTCAAGTCCGAGGTCATTCAGCCGATCTTCGACCTGGCCGACCCAAA
CCACCCAATCTACCACCAGATGCCTCCGGTGGGTGGCAGTGGAGGACAGG
GCGGCGGCGTGGGTCCAGGACCCAGCAGCAGCGGTGCTCTTAGCCTGGCG
GACATATCGAGCGGTCCGAACGGTCTAAACAGCTCCGGAATGGAGATAAG
CATGAACAGCTCCGGGGGCGACGATAAGATGGGCGGTGCCATGCCCGACT
TGTCGCTGGGCCATGAGAAGTTCGGCGGTGGCAGCAGCAGCTCCAAGCGT
CACTACTCGGAGCAACACTATTCCAAACGACAGTCGGTGGTCTCGTGCTC
GTCGAAGACCAGCAAGTCGCATCATCACAAACGGGAATATGTCAAGAGCT
CGCACGACATTGACTACCAGGTGCGGGAGATCATCGAGGAAGAAGATGAA
GGCCTGCAGATGCTGATGGCAGATGATCACCACTGTATGGGCGACGACTC
ACCGCCCACTTCTTCAAACCTGTTAGACGAGAAGAAGATCAAGCAGCTGC
TAAACAATCCGAATGTGCTGCGGCAGCTCCATACGCTGCAGAACTTCCAA
AATTTGAAGCCGCAGGAGGAGAACCAGAAGCATCGCTATCAGGACGAGGC
ACTGCAGCAGCATTTCCAGAACGTAATGAAGGGAAATGCTGGTATGCCGC
CGGGCATGGGCATGGGCATGAACATGAACGACAGCATGGACCTTAACAAG
GATGTCGAGTTCATATCGGAGCAACAGACCATAGAGTATGCAGCACTACG
CTGTGGGTGGGCCACCTGTCTAAGCTTGTTTACCAGGAGGAGCTGTCCGA
TACCTTTGGCGAATATGGCGATATAGTGAGCATCGATCAGATTGTGCCGC
GTGGATGCGCTTTTATTGTAATGAACCGACGCCAAGACGCCCACAAGGCG
ATGCAAGCTCTGAAGAACCACAAGCTGCAGGGACGAGCCATCACCATTTC
ATGGGCCGCCGGCAAGGGTGTGAAAAGCAAGGAGTGGAAGGACTACTGGG
ACCTCGAATTGGGTGTTACTTACATTCCTTGGTCCAAACTCAGTTCGGAT
ACGGACTTCGACGCGCTGGAGGAGGGTGGTATGTTCGACGAAGATACTAT
GCCCATCCAAATGAAGCAGAAGATTAAC

IP17766.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:07:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG4266-RB 4758 CG4266-RB 85..1420 1..1336 6680 100 Plus
CG4266-RA 4485 CG4266-RA 85..889 1..805 4025 100 Plus
CG4266.a 4383 CG4266.a 26..830 1..805 4025 100 Plus
CG4266-RB 4758 CG4266-RB 1736..2128 1336..1728 1965 100 Plus
CG4266-RA 4485 CG4266-RA 1463..1855 1336..1728 1965 100 Plus
CG4266.a 4383 CG4266.a 1395..1787 1336..1728 1965 100 Plus
CG4266-RA 4485 CG4266-RA 890..1147 1079..1336 1290 100 Plus
CG4266.a 4383 CG4266.a 831..975 1079..1223 725 100 Plus
CG4266.a 4383 CG4266.a 971..1079 1228..1336 530 99 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:06:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 17054055..17054644 805..216 2950 100 Minus
chr2R 21145070 chr2R 17051097..17051490 1728..1335 1970 100 Minus
chr2R 21145070 chr2R 17053630..17053904 1079..805 1375 100 Minus
chr2R 21145070 chr2R 17054891..17055107 217..1 1085 100 Minus
chr2R 21145070 chr2R 17053348..17053501 1232..1079 770 100 Minus
chr2R 21145070 chr2R 17053177..17053261 1336..1252 425 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:33:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:06:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21167596..21168185 805..216 2950 100 Minus
2R 25286936 2R 21164652..21165045 1728..1335 1970 100 Minus
2R 25286936 2R 21167171..21167445 1079..805 1375 100 Minus
2R 25286936 2R 21168432..21168648 217..1 1085 100 Minus
2R 25286936 2R 21166889..21167042 1232..1079 770 100 Minus
2R 25286936 2R 21166730..21166836 1336..1230 535 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:01:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 21168795..21169384 805..216 2950 100 Minus
2R 25260384 2R 21165851..21166244 1728..1335 1970 100 Minus
2R 25260384 2R 21168370..21168644 1079..805 1375 100 Minus
2R 25260384 2R 21169631..21169847 217..1 1085 100 Minus
2R 25260384 2R 21168088..21168241 1232..1079 770 100 Minus
2R 25260384 2R 21167929..21168035 1336..1230 535 100 Minus
Blast to na_te.dros performed on 2019-03-16 11:06:57 has no hits.

IP17766.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:08:09 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 17054891..17055107 1..217 100   Minus
chr2R 17051097..17051488 1337..1728 100 <- Minus
chr2R 17053177..17053275 1238..1336 92 <- Minus
chr2R 17053343..17053501 1079..1237 98 <- Minus
chr2R 17053631..17053903 806..1078 100 <- Minus
chr2R 17054055..17054642 218..805 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:09:46 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
CG4266-RB 1..1149 188..1336 100 -> Plus
CG4266-RB 1464..1857 1337..1728 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:08:24 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
CG4266-RB 1..1149 188..1336 100 -> Plus
CG4266-RB 1464..1857 1337..1728 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:07:44 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
CG4266-RC 1..1239 188..1426 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:18:44 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
CG4266-RB 1..1149 188..1336 100 -> Plus
CG4266-RB 1464..1857 1337..1728 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:27:04 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
CG4266-RC 1..1239 188..1426 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:37:25 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
CG4266-RB 1661..2054 1337..1728 99   Plus
CG4266-RB 11..1346 1..1336 100 -> Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:08:24 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
CG4266-RB 11..1346 1..1336 100 -> Plus
CG4266-RB 1661..2054 1337..1728 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:07:44 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
CG4266-RC 12..1739 1..1728 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:18:44 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
CG4266-RB 11..1346 1..1336 100 -> Plus
CG4266-RB 1661..2054 1337..1728 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:27:04 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
CG4266-RC 12..1739 1..1728 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:08:09 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21166730..21166834 1232..1336 100 <- Minus
2R 21166890..21167042 1079..1231 100 <- Minus
2R 21167172..21167444 806..1078 100 <- Minus
2R 21164652..21165043 1337..1728 100 <- Minus
2R 21167596..21168183 218..805 100 <- Minus
2R 21168432..21168648 1..217 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:08:09 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21166730..21166834 1232..1336 100 <- Minus
2R 21166890..21167042 1079..1231 100 <- Minus
2R 21167172..21167444 806..1078 100 <- Minus
2R 21164652..21165043 1337..1728 100 <- Minus
2R 21167596..21168183 218..805 100 <- Minus
2R 21168432..21168648 1..217 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:08:09 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21166730..21166834 1232..1336 100 <- Minus
2R 21166890..21167042 1079..1231 100 <- Minus
2R 21167172..21167444 806..1078 100 <- Minus
2R 21164652..21165043 1337..1728 100 <- Minus
2R 21167596..21168183 218..805 100 <- Minus
2R 21168432..21168648 1..217 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:07:44 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17052157..17052548 1337..1728 100 <- Minus
arm_2R 17054235..17054339 1232..1336 100 <- Minus
arm_2R 17054395..17054547 1079..1231 100 <- Minus
arm_2R 17054677..17054949 806..1078 100 <- Minus
arm_2R 17055101..17055688 218..805 100 <- Minus
arm_2R 17055937..17056153 1..217 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:41:17 Download gff for IP17766.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21165851..21166242 1337..1728 100 <- Minus
2R 21167929..21168033 1232..1336 100 <- Minus
2R 21168089..21168241 1079..1231 100 <- Minus
2R 21168371..21168643 806..1078 100 <- Minus
2R 21168795..21169382 218..805 100 <- Minus
2R 21169631..21169847 1..217 100   Minus

IP17766.pep Sequence

Translation from 187 to 1425

> IP17766.pep
METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKF
ILKCKPEYKVPGLYVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLF
RCAPEDKSRIIRVLNLWQKNNVFKSEVIQPIFDLADPNHPIYHQMPPVGG
SGGQGGGVGPGPSSSGALSLADISSGPNGLNSSGMEISMNSSGGDDKMGG
AMPDLSLGHEKFGGGSSSSKRHYSEQHYSKRQSVVSCSSKTSKSHHHKRE
YVKSSHDIDYQVREIIEEEDEGLQMLMADDHHCMGDDSPPTSSNLLDEKK
IKQLLNNPNVLRQLHTLQNFQNLKPQEENQKHRYQDEALQQHFQNVMKGN
AGMPPGMGMGMNMNDSMDLNKDVEFISEQQTIEYAALRCGWATCLSLFTR
RSCPIPLANMAI*

IP17766.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 20:56:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12972-PA 1352 GF12972-PA 1..392 1..387 1491 82.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 20:56:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20798-PA 1295 GG20798-PA 1..394 1..390 1797 94.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 20:56:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21172-PA 1378 GH21172-PA 1..402 1..387 1409 71 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:29:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG4266-PC 412 CG4266-PC 1..412 1..412 2173 100 Plus
CG4266-PB 1306 CG4266-PB 1..390 1..390 2015 98.7 Plus
CG4266-PD 1212 CG4266-PD 1..206 1..206 1072 100 Plus
CG4266-PA 1215 CG4266-PA 1..206 1..206 1072 100 Plus
CG4266-PA 1215 CG4266-PA 194..299 285..390 465 86.8 Plus
CG4266-PD 1212 CG4266-PD 194..296 285..390 437 84 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 20:56:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18767-PA 1377 GI18767-PA 1..402 1..387 1428 72.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 20:56:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10172-PA 1265 GL10172-PA 1..211 1..206 891 87.3 Plus
Dper\GL10172-PA 1265 GL10172-PA 210..305 296..387 276 68.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 20:56:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18068-PA 1362 GA18068-PA 1..400 1..387 1347 74.3 Plus
Dpse\GA18068-PB 1269 GA18068-PB 1..211 1..206 890 87.3 Plus
Dpse\GA18068-PB 1269 GA18068-PB 210..307 296..387 273 67.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 20:57:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15745-PA 1161 GM15745-PA 19..250 163..390 1054 94 Plus
Dsec\GM15744-PA 132 GM15744-PA 1..132 1..132 712 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 20:57:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25221-PA 1455 GD25221-PA 1..392 1..390 2059 97.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 20:57:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21791-PA 1344 GJ21791-PA 1..397 1..387 1509 75.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 20:57:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19487-PA 1307 GK19487-PA 1..400 1..387 1371 76.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 20:57:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13738-PA 1293 GE13738-PA 1..391 1..390 1796 92.9 Plus

IP17766.hyp Sequence

Translation from 187 to 1425

> IP17766.hyp
METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKF
ILKCKPEYKVPGLYVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLF
RCAPEDKSRIIRVLNLWQKNNVFKSEVIQPIFDLADPNHPIYHQMPPVGG
SGGQGGGVGPGPSSSGALSLADISSGPNGLNSSGMEISMNSSGGDDKMGG
AMPDLSLGHEKFGGGSSSSKRHYSEQHYSKRQSVVSCSSKTSKSHHHKRE
YVKSSHDIDYQVREIIEEEDEGLQMLMADDHHCMGDDSPPTSSNLLDEKK
IKQLLNNPNVLRQLHTLQNFQNLKPQEENQKHRYQDEALQQHFQNVMKGN
AGMPPGMGMGMNMNDSMDLNKDVEFISEQQTIEYAALRCGWATCLSLFTR
RSCPIPLANMAI*

IP17766.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:46:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG4266-PC 412 CG4266-PC 1..412 1..412 2173 100 Plus
CG4266-PB 1306 CG4266-PB 1..390 1..390 2015 98.7 Plus
CG4266-PD 1212 CG4266-PD 1..206 1..206 1072 100 Plus
CG4266-PA 1215 CG4266-PA 1..206 1..206 1072 100 Plus
CG4266-PA 1215 CG4266-PA 194..299 285..390 465 86.8 Plus
CG4266-PD 1212 CG4266-PD 194..296 285..390 437 84 Plus