IP17771.complete Sequence
511 bp assembled on 2007-01-15
GenBank Submission: BT030170
> IP17771.complete
ATTTCTTATTTTTATTGAATTATGAATATTTTGACAAAAGTAAAATACAG
CTGCAGGGTGAGCTCGGTTTTAAACAGAGATGTGAAGCAGCACGGAAAGC
AATTCATGTTTGATACGCGGGAAGAAACTTCTTGGAATTCAGATGAGGGA
ACCCCCCAATTCATTACCATTAGCTTGGAGGAGCCACAGAAAGTAGCTGG
ATTTAGTTTCCAGTTCCAAGGCGGATTCTCTGGCCAAAAATCCGAACTGA
TCATGTACTCCGCTGACGGAGCCCAAGTTCACCAAGAGCCATTCTACCCA
GAAGATATCAACTCCCCACAGCTTTTTCAGATTGCGGAATCAGTCCGGGA
AAACCCCTGCTCAAAGCTAAAGTTCGTCTTCGAGTCCAGCACCGATCTAT
TTGGTAGAATCATTGTTTACGATCTCCAGCTGTTCGGCTAGTCTCTGACC
CAATAGATCTTACTAAATGTGTACAAAATCTTCTCTAAAAAAAAAAAAAA
AAAAAAAAAAA
IP17771.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:03:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34213-RA | 651 | CG34213-RA | 36..523 | 1..488 | 2440 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:56:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 19853203..19853543 | 486..146 | 1675 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 19853594..19853690 | 148..52 | 485 | 100 | Minus |
chr2R | 21145070 | chr2R | 19853736..19853792 | 57..1 | 285 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:33:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:56:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23967122..23967464 | 488..146 | 1715 | 100 | Minus |
2R | 25286936 | 2R | 23967515..23967611 | 148..52 | 485 | 100 | Minus |
2R | 25286936 | 2R | 23967657..23967713 | 57..1 | 285 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:58:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 23968321..23968663 | 488..146 | 1715 | 100 | Minus |
2R | 25260384 | 2R | 23968714..23968810 | 148..52 | 485 | 100 | Minus |
2R | 25260384 | 2R | 23968856..23968912 | 57..1 | 285 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 15:56:51 has no hits.
IP17771.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:57:39 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 19853203..19853541 | 148..486 | 99 | <- | Minus |
chr2R | 19853595..19853685 | 57..147 | 100 | <- | Minus |
chr2R | 19853737..19853792 | 1..56 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:09:52 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34213-RA | 1..420 | 22..441 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:02:34 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34213-RA | 1..420 | 22..441 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:46:53 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34213-RA | 1..420 | 22..441 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:02:45 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34213-RA | 1..420 | 22..441 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:21:41 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34213-RA | 1..420 | 22..441 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:27:47 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34213-RA | 1..486 | 1..486 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:02:34 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34213-RA | 4..489 | 1..486 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:46:53 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34213-RA | 33..518 | 1..486 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:02:45 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34213-RA | 1..486 | 1..486 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:21:41 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34213-RA | 33..518 | 1..486 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:57:39 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23967124..23967462 | 148..486 | 100 | <- | Minus |
2R | 23967516..23967606 | 57..147 | 100 | <- | Minus |
2R | 23967658..23967713 | 1..56 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:57:39 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23967124..23967462 | 148..486 | 100 | <- | Minus |
2R | 23967516..23967606 | 57..147 | 100 | <- | Minus |
2R | 23967658..23967713 | 1..56 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:57:39 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23967124..23967462 | 148..486 | 100 | <- | Minus |
2R | 23967516..23967606 | 57..147 | 100 | <- | Minus |
2R | 23967658..23967713 | 1..56 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:46:53 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19854647..19854985 | 148..486 | 100 | <- | Minus |
arm_2R | 19855039..19855129 | 57..147 | 100 | <- | Minus |
arm_2R | 19855181..19855236 | 1..56 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:37:07 Download gff for
IP17771.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23968341..23968679 | 148..486 | 100 | <- | Minus |
2R | 23968733..23968823 | 57..147 | 100 | <- | Minus |
2R | 23968875..23968930 | 1..56 | 100 | | Minus |
IP17771.pep Sequence
Translation from 21 to 440
> IP17771.pep
MNILTKVKYSCRVSSVLNRDVKQHGKQFMFDTREETSWNSDEGTPQFITI
SLEEPQKVAGFSFQFQGGFSGQKSELIMYSADGAQVHQEPFYPEDINSPQ
LFQIAESVRENPCSKLKFVFESSTDLFGRIIVYDLQLFG*
IP17771.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34213-PA | 139 | CG34213-PA | 1..139 | 1..139 | 724 | 100 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:16:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE11505-PA | 90 | GE11505-PA | 1..90 | 50..139 | 411 | 84.4 | Plus |
IP17771.hyp Sequence
Translation from 21 to 440
> IP17771.hyp
MNILTKVKYSCRVSSVLNRDVKQHGKQFMFDTREETSWNSDEGTPQFITI
SLEEPQKVAGFSFQFQGGFSGQKSELIMYSADGAQVHQEPFYPEDINSPQ
LFQIAESVRENPCSKLKFVFESSTDLFGRIIVYDLQLFG*
IP17771.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:47:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34213-PA | 139 | CG34213-PA | 1..139 | 1..139 | 724 | 100 | Plus |